MatrixDB is a freely available database focused on interactions established by extracellular matrix proteins, proteoglycans and polysaccharides
| Source | Last Updated |
|---|---|
| MatrixDB | May 10, 2022 |
| Molecule | Molecule Name | Molecule Species | Partner ▲ | Partner Name | Partner Species |
|---|---|---|---|---|---|
| GAG_1 | Heparin | Q99PE7 | Abcg5 | Rattus norvegicus | |
| O75521-2 | Eci2 | Homo sapiens | Q9BU76-3 | Mmtag2 | Homo sapiens |
| Q96JN8-2 | Neurl4 | Homo sapiens | Q9BWL3-2 | C1orf43 | Homo sapiens |
| Q96RS6-2 | NUDCD1 | Homo sapiens | Q9BWW4-2 | Ssbp3 | Homo sapiens |
| Q92900-2 | Upf1 | Homo sapiens | Q9BY44-2 | EIF2A | Homo sapiens |
| GAG_2 | Heparan sulfate | Q9BY76 | Angptl4 | Homo sapiens | |
| GAG_1 | Heparin | Q9BZV3 | Impg2 | Homo sapiens | |
| GAG_9 | Hyaluronan | Q9BZV3 | Impg2 | Homo sapiens | |
| PFRAG_95_mouse | CTF1-alpha | Mus musculus | Q9DB05 | NAPA | Mus musculus |
| GAG_1 | Heparin | Q9EPH1 | A1bg | Rattus norvegicus | |
| GAG_1 | Heparin | Q9EQ25 | Slc38a4 | Rattus norvegicus | |
| GAG_1 | Heparin | Q9EQP5 | Prelp | Rattus norvegicus | |
| PFRAG_48_human | Major prion protein | Homo sapiens | Q9EQU5 | Set | Mus musculus |
| GAG_1 | Heparin | Q9EQV9 | Cpb2 | Rattus norvegicus | |
| PFRAG_95_mouse | CTF1-alpha | Mus musculus | Q9ER00 | Stx12 | Mus musculus |
| GAG_1 | Heparin | Q9GKN8 | Prelp | Bos taurus | |
| GAG_2 | Heparan sulfate | Q9GKN8 | Prelp | Bos taurus | |
| Q96JN8-2 | Neurl4 | Homo sapiens | Q9H2G2-2 | Slk | Homo sapiens |
| P10599-1 | Txn | Homo sapiens | Q9H3M7-1 | Txnip | Homo sapiens |
| P40337-3 | Vhl | Homo sapiens | Q9H869-3 | YY1AP1 | Homo sapiens |
| Q96JN8-2 | Neurl4 | Homo sapiens | Q9HBE1-2 | PATZ1 | Homo sapiens |
| O75521-2 | Eci2 | Homo sapiens | Q9HCJ0-2 | Tnrc6c | Homo sapiens |
| GAG_1 | Heparin | Q9JHW1 | Cpd | Rattus norvegicus | |
| GAG_1 | Heparin | Q9JHZ9 | Slc38a3 | Rattus norvegicus | |
| GAG_1 | Heparin | Q9JI66 | Slc4a4 | Rattus norvegicus |
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
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Last updated: December 8, 2025