MatrixDB is a freely available database focused on interactions established by extracellular matrix proteins, proteoglycans and polysaccharides
| Source | Last Updated |
|---|---|
| MatrixDB | May 10, 2022 |
| Molecule | Molecule Name | Molecule Species | Partner | Partner Name | Partner Species ▲ |
|---|---|---|---|---|---|
| P07214 | SPARC | Mus musculus | MULT_7_VAR1_bovine | Collagen-XI v1 | Bos taurus |
| P07996 | Thbs1 | Homo sapiens | MULT_7_VAR1_bovine | Collagen-XI v1 | Bos taurus |
| P56199 | Itga1 | Homo sapiens | MULT_9_bovine | Collagen-II | Bos taurus |
| P21980 | Tgm2 | Homo sapiens | MULT_7_VAR1_bovine | Collagen-XI v1 | Bos taurus |
| MULT_10_bovine | Collagen-III | Bos taurus | P13213 | SPARC | Bos taurus |
| MULT_3_bovine | Collagen-I | Bos taurus | MULT_3_bovine | Collagen-I | Bos taurus |
| MULT_3_bovine | Collagen-I | Bos taurus | P13213 | SPARC | Bos taurus |
| MULT_3_human | Collagen-I | Homo sapiens | P21809 | BGN | Bos taurus |
| MULT_3_rat | Collagen-I | Rattus norvegicus | P13213 | SPARC | Bos taurus |
| MULT_4_VAR1_bovine | Collagen-IV v1 | Bos taurus | P13213 | SPARC | Bos taurus |
| MULT_4_VAR1_human | Collagen-IV v1 | Homo sapiens | P21809 | BGN | Bos taurus |
| MULT_4_VAR1_human | Collagen-IV v1 | Homo sapiens | P13213 | SPARC | Bos taurus |
| MULT_57_human | Thrombospondin-1 | Homo sapiens | P13213 | SPARC | Bos taurus |
| MULT_5_VAR1_human | Collagen-V heterotrimer 2 different chains | Homo sapiens | P13213 | SPARC | Bos taurus |
| MULT_8_human | Collagen-VI | Homo sapiens | P21793 | DCN | Bos taurus |
| MULT_8_human | Collagen-VI | Homo sapiens | P21809 | BGN | Bos taurus |
| MULT_8_human | Collagen-VI | Homo sapiens | MULT_3_bovine | Collagen-I | Bos taurus |
| MULT_8_human | Collagen-VI | Homo sapiens | MULT_5_VAR1_bovine | Collagen-V heterotrimer 2 different chains | Bos taurus |
| MULT_9_bovine | Collagen-II | Bos taurus | P13213 | SPARC | Bos taurus |
| PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens | P21809 | BGN | Bos taurus |
| PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens | MULT_7_VAR1_bovine | Collagen-XI v1 | Bos taurus |
| PFRAG_27_human | Serine protease HTRA2, mitochondrial | Homo sapiens | P02666 | CSN2 | Bos taurus |
| MULT_10_human | Collagen-III | Homo sapiens | P00760 | Bos taurus | |
| P08587 | Tgm2 | MULT_7_VAR1_bovine | Collagen-XI v1 | Bos taurus | |
| CAT_2 | Copper | P33072 | Lox | Bos taurus |
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Partly supported by NIH Common Fund Grant #1U01GM125267-01
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Last updated: December 8, 2025