Microbial Genome Database (MBGD)

MBGD is a database for comparative analysis of completely sequenced microbial genomes, the number of which is now growing rapidly. A list of sequences with high scores in amino acid sequences registered in MBGD against the database sequences of glycan-related genes and the results of amino acid homology search by GhostX.
Nucleic Acids Res. 47:D382-D389 (2019)

Source Last Updated
Microbial Genome Database (MBGD) October 23, 2024
Displaying entries 1794176 - 1794200 of 1794267 in total
CAZy Enzyme Classes CAZy Family ▲ GenBank Protein Name Gene ID MBGD Organism Identity(%) Percentage of Alignment Length(%) Normalized score of GhostX
Polysaccharide Lyases (PLs) PL9_2 SDJ46258.1 Right handed beta helix region cai:CACI_RS23250 Catenulispora acidiphila DSM 44928 52.9933 89.84 467.233
Polysaccharide Lyases (PLs) PL9_2 SDR91804.1 Chondroitinase B gm04421:LK13_RS00485 Paenibacillus polymyxa 57.0312 100.0 561.222
Polysaccharide Lyases (PLs) PL9_2 SDR91804.1 Chondroitinase B ppq:PPSQR21_RS12340 Paenibacillus polymyxa SQR-21 57.0312 100.0 561.222
Polysaccharide Lyases (PLs) PL9_2 SDU80058.1 Right handed beta helix region cai:ST1449 Catenulispora acidiphila DSM 44928 57.2668 92.57 512.686
Polysaccharide Lyases (PLs) PL9_2 VBB16541.1 Uncharacterized protein aba:ACID345_RS22805 Candidatus Koribacter versatilis Ellin345 48.46 79.96 456.832
Polysaccharide Lyases (PLs) PL9_2 AZZ79442.1 ene:ENT_30340 Enterococcus faecalis 91.866 96.98 763.066
Polysaccharide Lyases (PLs) PL9_2 VEI06111.1 spsy:AZE41_11590 Sporosarcina psychrophila 55.4348 99.13 531.176
Polysaccharide Lyases (PLs) PL9_2 SCA86607.1 gm05847:AN935_RS18380 Bacillus inaquosorum 81.4103 100.0 798.119
Polysaccharide Lyases (PLs) PL9_2 SNV16271.1 bpu:BPUM_RS17360 Bacillus pumilus SAFR-032 98.3158 100.0 941.028
Polysaccharide Lyases (PLs) PL9_2 AZZ79442.1 llt:CVCAS_RS12590 Lactococcus lactis subsp. lactis CV56 91.866 96.98 763.066
Polysaccharide Lyases (PLs) PL9_2 VEI34444.1 gm05383:AM592_RS12600 Bacillus gobiensis 42.1176 97.25 328.176
Polysaccharide Lyases (PLs) PL9_3 CEF77871.1 Chromosome 2, complete genome 23550460 gm06264:FG05_03131 Fusarium graminearum CS3005 100.0 100.0 788.104
Polysaccharide Lyases (PLs) PL9_3 BAE63970.1 Right handed beta helix domain-containing protein aor:AOR_1_220074 Aspergillus oryzae RIB40 97.9592 93.55 783.867
Polysaccharide Lyases (PLs) PL9_3 SDT25290.1 Right handed beta helix region sbh:SBI_RS08895 Streptomyces bingchenggensis BCW-1 61.186 94.64 457.218
Polysaccharide Lyases (PLs) PL9_3 SDT60488.1 RNA polymerase sigma factor ams:AMIS_RS08650 Actinoplanes missouriensis 431 62.6801 99.71 852.818
Polysaccharide Lyases (PLs) PL9_3 SHI28350.1 Right handed beta helix region sma:SAP1_RS32910 Streptomyces avermitilis MA-4680 = NBRC 14893 79.6196 95.83 602.823
Polysaccharide Lyases (PLs) PL9_3 AQZ70497.1 Pectate lyase scb:SCAB_RS39240 Streptomyces scabiei 87.22 73.4973 96.06 561.992
Polysaccharide Lyases (PLs) PL9_3 AXH93077.1 RNA polymerase subunit sigma-70 mil:ML5_RS23765 Micromonospora sp. L5 92.3184 100.0 1329.69
Polysaccharide Lyases (PLs) PL9_3 BBJ44663.1 Pectate lyase svl:STRVI_RS32550 Streptomyces violaceusniger Tu 4113 94.9875 98.27 771.926
Polysaccharide Lyases (PLs) PL9_3 AEM86339.1 Pectate lyase svl:STRVI_RS32550 Streptomyces violaceusniger Tu 4113 98.0296 100.0 807.749
Polysaccharide Lyases (PLs) PL9_3 CCA76167.1 Related to pectate lyase L scb:SCAB_RS39240 Streptomyces scabiei 87.22 56.1644 81.47 419.853
Polysaccharide Lyases (PLs) PL9_3 CCT61106.1 Right handed beta helix domain-containing protein gm06478:FFUJ_11652 Fusarium fujikuroi IMI 58289 69.2506 98.72 558.525
Polysaccharide Lyases (PLs) PL9_3 CCT72704.1 Related to pectate lyase L gm06478:FFUJ_12595 Fusarium fujikuroi IMI 58289 95.4315 100.0 766.148
Polysaccharide Lyases (PLs) PL9_3 CCT75620.1 Related to pectate lyase L gm06478:FFUJ_11652 Fusarium fujikuroi IMI 58289 100.0 100.0 800.816
Polysaccharide Lyases (PLs) PL9_3 AHE14911.1 DUF1565 domain-containing protein svl:STRVI_RS32550 Streptomyces violaceusniger Tu 4113 59.6491 85.71 275.789

About Release Notes Help Feedback

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International


GlyCosmos Portal v4.1.0

Last updated: December 9, 2024