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MIRAGE
Collagen biosynthesis and modifying enzymes

Summary
Species
Rattus norvegicus
Reactome
PubChem
Click on a node on the pathway to see its details. Glycoproteins are marked with a glycoprotein icon in their name.
P4hbP4HB:Collagen propeptidesCollagen propeptides2OG4-Hyp collagen propeptides:P4HBO2CO2SUCCA4-Hyp collagen propeptidesProlyl 3-hydroxylases:Fe2+:3,4-Hyp collagen propeptidesProlyl 3-hydroxylases:Fe2+:4-Hyp collagen propeptidesLysyl hydroxylases:Lysyl hydroxylase procollagen substratesLysyl hydroxylases:Lysyl hydroxylated collagen propeptidesLysyl hydroxylasesLysyl hydroxylated collagen propeptidesCOLGALT1,COLGALT2:Lysyl hydroxylated collagen propeptidesCOLGALT1,COLGALT2PLOD3:Fe2+ dimerPLOD3:Fe2+ dimer:Lysyl hydroxylated collagen propeptidesCOLGALT1,COLGALT2:Galactosyl-hydroxylysyl collagen propeptidesUDP-GalUDPPLOD3:Fe2+ dimer:Galactosyl-hydroxylysyl collagen propeptidesGalactosyl-hydroxylysyl collagen propeptidesUDP-GlcPLOD3:Fe2+ dimer:Glucosyl-galactosyl-hydroxylysyl collagen propeptidesGlucosyl-galactosyl-hydroxylysyl collagen propeptidesCollagens and tropocollagens:Serpin H1P29457Collagens and tropocollagensTransmembrane collagensTransmembrane collagensFibrillar procollagensFibrillar procollagens -NTropocollagens
ProteinProtein familyDNARNAComplexChemical/MoleculePhenotype/StimulusNucleusMitochondriaEndosomeGolgi apparatusLysosomeMembraneUp-regulatesDown-regulatesPhysical interactionUnknownDirectIndirectBindingHighlight
SPV: a JavaScript Signaling Pathway Visualizer, Bioinformatics, 2018
Displaying all 6 entries
GlyCosmos Lectin UniProt ID Lectin Name Pathway Viewer
GL_004945 Q63321 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 view
GL_004977 P54001 Prolyl 4-hydroxylase subunit alpha-1 view
GL_005176 Q5U367 Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 view
GL_005226 Q811A3 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 view
GL_005236 Q4KLM6 Prolyl 3-hydroxylase 2 view
GL_005252 Q6W3E9 Prolyl 4-hydroxylase subunit alpha-3 view
If you want to check the location of a particular molecule, you can do so by clicking on the "Switching Highlight" button on the page you have navigated to by clicking on "view".
a simple tooltip
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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

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Last updated: April 7, 2025