GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	November 12, 2024
ECODAB	April 1, 2019

Displaying entries **376 - 400** of **435** in total

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Pathway Name	Protein Name	UniProt ID	Gene Symbol ▲	Organism
EPHA-mediated growth cone collapse	Ras-like GTP-binding protein rhoA SH2 domain-containing protein Tyrosine protein-kinase src-1	G5EE56 Q22038 Q965J0	ephx-1 rho-1 rhoa src-1	Caenorhabditis elegans
GABA receptor activation	Gamma-aminobutyric acid receptor exp-1 Gamma-aminobutyric acid receptor subunit beta Gamma-aminobutyric acid receptor subunit beta Gamma-aminobutyric acid receptor subunit beta Gamma-aminobutyric acid receptor subunit beta Ligand-Gated ion Channel Ligand-Gated ion Channel Neurotransmitter-gated ion-channel ligand-binding domain-containing protein	A0A3P6NNS2 G5ECD3 G5ECJ0 G5ECN1 O18276 Q6BET0 Q7YTP9 Q9U2E2	exp-1 gab-1 lgc-35 lgc-36 lgc-37 lgc-38 lgc-43 unc-49 unc-49B	Caenorhabditis elegans
Cell-extracellular matrix interactions	Calponin-homology (CH) domain-containing protein Integrin-linked protein kinase homolog pat-4 LIM domain-containing protein pin-2 LIM domain-containing protein unc-97 Paralyzed arrest at two-fold protein 6 Protein unc-112 UNC-34 Zyxin	G5EG53 O16785 P50464 Q18685 Q19157 Q9TZC4 Q9U3F4 U4PBJ9	fln-1 pat-4 pat-6 pin-2 unc-112 unc-34 unc-97 zyx-1	Caenorhabditis elegans
Vitamin B1 (thiamin) metabolism	Folate transporter 1 Folate-like transporter 2 Folate-like transporter 3 Mitochondrial thiamine pyrophosphate carrier Thiamin pyrophosphokinase 1	A3QMB9 O45166 P30636 Q17766 Q22931	folt-1 folt-2 folt-3 hpo-12 tag-330 tpk-1	Caenorhabditis elegans
SEMA3A-Plexin repulsion signaling by inhibiting Integrin adhesion	FERM domain-containing protein Moesin/ezrin/radixin homolog 1 PIPK domain-containing protein Sema domain-containing protein Sema domain-containing protein Semaphorin-1A Semaphorin-2A Tyrosine protein-kinase src-1	G5EE56 G5EGK1 O01759 O17905 Q17330 Q95XP4 Q9TYS4 U4PRY7	frm-3 mab-20 plx-1 ppk-1 sema-1a smp-1 smp-2 src-1 tln-1	Caenorhabditis elegans
ROS and RNS production in phagocytes	NRAMP-like transporter smf-1 NRAMP-like transporter smf-2 NRAMP-like transporter smf-3 Probable V-type proton ATPase subunit F Probable V-type proton ATPase subunit G Probable V-type proton ATPase subunit H 2 V-type proton ATPase 116 kDa subunit a 1 V-type proton ATPase 116 kDa subunit a 2 V-type proton ATPase 116 kDa subunit a 3 V-type proton ATPase 116 kDa subunit a 4 V-type proton ATPase 16 kDa proteolipid subunit c 2 V-type proton ATPase 16 kDa proteolipid subunit c 3 V-type proton ATPase 21 kDa proteolipid subunit c'' V-type proton ATPase catalytic subunit A V-type proton ATPase subunit B 1 V-type proton ATPase subunit B 2 V-type proton ATPase subunit C V-type proton ATPase subunit D V-type proton ATPase subunit E V-type proton ATPase subunit e V-type proton ATPase subunit	B2MZD0 C0HLB3 C0HLB4 G5EDB8 G5EEK9 G5EGP4 P30628 P34462 P91303 Q19626 Q20591 Q21433 Q21434 Q22494 Q23680 Q95X44 Q95XG8 Q95YD5 Q9N5A0 Q9XW92 Q9XXU9	fus-1 rdy-1 smf-1 smf-2 smf-3 spe-5 unc-32 vha-10 vha-11 vha-12 vha-13 vha-14 vha-15 vha-16 vha-17 vha-2 vha-3 vha-4 vha-5 vha-6 vha-7 vha-8 vha-9	Caenorhabditis elegans
Ion channel transport	Probable V-type proton ATPase subunit F Probable V-type proton ATPase subunit G Probable V-type proton ATPase subunit H 2 V-type proton ATPase 116 kDa subunit a 1 V-type proton ATPase 116 kDa subunit a 2 V-type proton ATPase 116 kDa subunit a 3 V-type proton ATPase 116 kDa subunit a 4 V-type proton ATPase 16 kDa proteolipid subunit c 2 V-type proton ATPase 16 kDa proteolipid subunit c 3 V-type proton ATPase 21 kDa proteolipid subunit c'' V-type proton ATPase catalytic subunit A V-type proton ATPase subunit B 1 V-type proton ATPase subunit B 2 V-type proton ATPase subunit C V-type proton ATPase subunit D V-type proton ATPase subunit E V-type proton ATPase subunit S1 V-type proton ATPase subunit e V-type proton ATPase subunit	B2MZD0 C0HLB3 C0HLB4 G5EDB8 G5EEK9 G5EGP4 P30628 P34462 P91303 Q19626 Q20591 Q22494 Q23680 Q95X44 Q95YD5 Q9N5A0 Q9TYW1 Q9XW92 Q9XXU9	fus-1 rdy-1 spe-5 unc-32 vha-10 vha-11 vha-12 vha-13 vha-14 vha-15 vha-16 vha-17 vha-19 vha-2 vha-3 vha-4 vha-5 vha-6 vha-7 vha-8 vha-9	Caenorhabditis elegans
Nephrin family interactions	Calponin-homology (CH) domain-containing protein NCK (Non-Catalytic region of tyrosine Kinase) adaptor protein family SH2 domain-containing protein Synaptogenesis protein syg-1 Synaptogenesis protein syg-2 Tyrosine protein-kinase src-1	B1Q236 G5EE56 O17772 Q95PX0 Q95XA9 Q9U3P2	gap-3 nck-1 pes-7 src-1 syg-1 syg-2	Caenorhabditis elegans
Muscarinic acetylcholine receptors	Muscarinic acetylcholine receptor gar-3	Q9U7D5	gar-3	Caenorhabditis elegans
GABA B receptor activation	Gamma-aminobutyric acid type B receptor subunit 1 Gamma-aminobutyric acid type B receptor subunit 2	G5ECB2 H2L0Q3	gbb-1 gbb-2	Caenorhabditis elegans
Astrocytic Glutamate-Glutamine Uptake And Metabolism	Amino acid transporter Amino acid transporter Excitatory amino acid transporter Glutamine synthetase Probable glutamine synthetase Putative sodium-dependent excitatory amino acid transporter glt-3 Putative sodium-dependent excitatory amino acid transporter glt-4 Putative sodium-dependent excitatory amino acid transporter glt-6 glutamine synthetase glutamine synthetase glutamine synthetase	O02225 O18210 P34497 Q10901 Q21353 Q21751 Q22682 Q95YD1 Q9U307 Q9UAY8 Q9XVU2	gln-1 gln-2 gln-3 gln-5 gln-6 glt-1 glt-3 glt-4 glt-5 glt-6 glt-7	Caenorhabditis elegans
Activation of AMPA receptors	GLutamate Receptor family (AMPA) GLutamate Receptor family (AMPA) GLutamate Receptor family (AMPA) Glutamate receptor 1 Glutamate receptor 2 Glutamate receptor ionotropic, kainate 2 Glutamate receptor ionotropic, kainate glr-3	A0A1T5HUM0 O01623 P34299 Q10914 Q17697 Q21415 Q8MXV8	glr-1 glr-2 glr-3 glr-4 glr-5 glr-6 glr-7	Caenorhabditis elegans
Amino acid transport across the plasma membrane	Amino acid transporter transmembrane domain-containing protein Amino acid transporter transmembrane domain-containing protein Amino acid transporter transmembrane domain-containing protein Amino acid transporter transmembrane domain-containing protein Amino acid transporter transmembrane domain-containing protein Amino acid transporter Amino acid transporter Excitatory amino acid transporter Mitochondrial carnitine/acylcarnitine carrier protein CACL Probable amino acid transporter skat-1 Putative sodium-dependent excitatory amino acid transporter glt-3 Putative sodium-dependent excitatory amino acid transporter glt-4 Putative sodium-dependent excitatory amino acid transporter glt-6 Sodium-dependent nutrient amino acid transporter 1 Sodium-dependent transporter snf-5 Transporter Transporter	G4SQY7 G5EBM5 G5EE39 O18210 O45936 O62286 P34479 P90890 Q10901 Q18595 Q21353 Q21751 Q22682 Q8I4M0 Q9UAY8 Q9XUG5 Q9XX44	glt-1 glt-3 glt-4 glt-5 glt-6 glt-7 skat-1 slc-25A29 slc-25a29 slc-36.1 slc-36.2 slc-36.3 slc-36.4 slc-36.5 snf-2 snf-5 snf-7 snf-9	Caenorhabditis elegans
N-glycan trimming and elongation in the cis-Golgi	Putative alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	Q11068	gly-13	Caenorhabditis elegans
N-Glycan antennae elongation	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase	Q9NDH7	gly-2	Caenorhabditis elegans
Leukotriene receptors	G-protein coupled receptors family 1 profile domain-containing protein G-protein coupled receptors family 1 profile domain-containing protein	H2KZ99 Q9XUK8	gnrr-4 npr-14	Caenorhabditis elegans
P2Y receptors	G-protein coupled receptors family 1 profile domain-containing protein	H2KZ99	gnrr-4	Caenorhabditis elegans
Zinc influx into cells by the SLC39 gene family	Zinc transporter ZIP3 Zinc transporter ZIP8 Zinc transporter zipt-7.2 Zrt (ZRT), Irt- (IRT-) like Protein Transporter Zrt (ZRT), Irt- (IRT-) like Protein Transporter	O62192 P91348 Q22395 Q9XTQ7 U4PS08	hke-4.2 tag-140 zipt-1 zipt-15 zipt-16 zipt-2.4 zipt-7.2	Caenorhabditis elegans
Inositol transporters	Proton myo-inositol cotransporter hmit-1.3	Q21455	hmit-1.3	Caenorhabditis elegans
TCF dependent signaling in response to WNT	Beta-catenin-like protein hmp-2	O44326	hmp-2	Caenorhabditis elegans
PAOs oxidise polyamines to amines	Amine oxidase domain-containing protein	O76383	hpo-15	Caenorhabditis elegans
Nectin/Necl trans heterodimerization	Ig-like domain-containing protein	A7LPD6	igcm-3	Caenorhabditis elegans
IRE1alpha activates chaperones	Serine/threonine-protein kinase/endoribonuclease ire-1	Q09499	ire-1	Caenorhabditis elegans
Disinhibition of SNARE formation	Acetylcholine regulator unc-18 Protein kinase C-like 2 Putative syntaxin-2 Syntaxin-1A homolog Syntaxin-binding protein 1	O16000 O44412 P34815 P90980 Q20574	kin-11 lan-2 pkc-2 syn-2 syx-2 unc-18 unc-64 uncp-18	Caenorhabditis elegans
Response to elevated platelet cytosolic Ca2+	Protein kinase C-like 2	P90980	kin-11 pkc-2	Caenorhabditis elegans

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