GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 176 - 200 of 499 in total
Pathway Name Protein Name UniProt ID Gene Symbol ▼ Organism GlyTouCan ID
Vitamin D (calciferol) metabolism
  • XL285
  • daf-12
  • daf-20
  • daf-9
  • mig-7
  • nhr-48
  • nhr-8
  • sol-1
Caenorhabditis elegans
Nuclear Receptor transcription pathway
  • XL285
  • chr-3
  • cnr-14
  • cnr-3
  • cnr-8
  • csr-1
  • daf-12
  • daf-20
  • fax-1
  • gei-8
  • let-527
  • mig-7
  • nhr-1
  • nhr-10
  • nhr-100
  • nhr-101
  • nhr-114
  • nhr-116
  • nhr-118
  • nhr-120
  • nhr-129
  • nhr-136
  • nhr-137
  • nhr-14
  • nhr-141
  • nhr-147
  • nhr-148
  • nhr-149
  • nhr-152
  • nhr-153
  • nhr-154
  • nhr-168
  • nhr-17
  • nhr-173
  • nhr-2
  • nhr-204
  • nhr-206
  • nhr-207
  • nhr-208
  • nhr-209
  • nhr-221
  • nhr-23
  • nhr-24
  • nhr-25
  • nhr-258
  • nhr-277
  • nhr-3
  • nhr-35
  • nhr-36
  • nhr-38
  • nhr-40
  • nhr-41
  • nhr-47
  • nhr-48
  • nhr-49
  • nhr-6
  • nhr-60
  • nhr-64
  • nhr-67
  • nhr-68
  • nhr-69
  • nhr-7
  • nhr-76
  • nhr-8
  • nhr-85
  • nhr-91
  • nhr-93
  • nr1g1
  • nr4a5
  • pqn-12
  • sex-1
  • unc-55
Caenorhabditis elegans
Ion transport by P-type ATPases
  • W08D2.5
  • cal-5
  • catp-5
  • catp-7
  • catp-8
  • cua-1
  • mca-1
  • mca-2
  • mca-3
  • mca-4
  • pmr-1
  • sca-1
  • tat-1
  • tat-2
  • tat-3
  • tat-4
  • tat-5
  • tat-6
  • unc-43
Caenorhabditis elegans
Sphingolipid catabolism
  • W02F12.2
  • alh-4
  • alh-5
  • plpp-1.1
  • plpp-1.2
  • plpp-1.3
  • spl-1
Caenorhabditis elegans
RNA Polymerase II Transcription Initiation
  • TFIIE-alpha
  • TFIIE-beta
  • ama-1
  • cdk-7
  • fust-1
  • gtf-2A2
  • gtf-2E1
  • gtf-2E2
  • gtf-2F1
  • gtf-2F2
  • gtf-2H1
  • gtf-2H2C
  • gtf-2H3
  • gtf-2H4
  • gtf-2H5
  • gtf-2e1
  • gtf-2e2
  • gtf-2f1
  • gtf-2f2
  • gtf-2h1
  • gtf-2h3
  • mnat-1
  • pqn-51
  • rpb-1
  • rpb-10
  • rpb-11
  • rpb-12
  • rpb-2
  • rpb-3
  • rpb-4
  • rpb-5
  • rpb-6
  • rpb-7
  • rpb-8
  • rpb-9
  • taf-1
  • taf-10
  • taf-11
  • taf-11.3
  • taf-12
  • taf-13
  • taf-2
  • taf-3
  • taf-4
  • taf-5
  • taf-6.1
  • taf-7.1
  • taf-7.2
  • taf-9
  • tbp
  • tbp-1
  • ttb-1
  • xpb-1
  • xpd-1
Caenorhabditis elegans
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
  • TFIIE-alpha
  • TFIIE-beta
  • ama-1
  • cdk-7
  • fust-1
  • gtf-2A2
  • gtf-2E1
  • gtf-2E2
  • gtf-2F1
  • gtf-2F2
  • gtf-2H1
  • gtf-2H2C
  • gtf-2H3
  • gtf-2H4
  • gtf-2H5
  • gtf-2e1
  • gtf-2e2
  • gtf-2f1
  • gtf-2f2
  • gtf-2h1
  • gtf-2h3
  • mnat-1
  • pqn-51
  • rpb-1
  • rpb-10
  • rpb-11
  • rpb-12
  • rpb-2
  • rpb-3
  • rpb-4
  • rpb-5
  • rpb-6
  • rpb-7
  • rpb-8
  • rpb-9
  • taf-1
  • taf-10
  • taf-11
  • taf-11.3
  • taf-12
  • taf-13
  • taf-2
  • taf-3
  • taf-4
  • taf-5
  • taf-6.1
  • taf-7.1
  • taf-7.2
  • taf-9
  • tbp
  • tbp-1
  • ttb-1
  • xpb-1
  • xpd-1
Caenorhabditis elegans
RNA Polymerase II Transcription Initiation And Promoter Clearance
  • TFIIE-alpha
  • TFIIE-beta
  • ama-1
  • cdk-7
  • fust-1
  • gtf-2A2
  • gtf-2E1
  • gtf-2E2
  • gtf-2F1
  • gtf-2F2
  • gtf-2H1
  • gtf-2H2C
  • gtf-2H3
  • gtf-2H4
  • gtf-2H5
  • gtf-2e1
  • gtf-2e2
  • gtf-2f1
  • gtf-2f2
  • gtf-2h1
  • gtf-2h3
  • mnat-1
  • pqn-51
  • rpb-1
  • rpb-10
  • rpb-11
  • rpb-12
  • rpb-2
  • rpb-3
  • rpb-4
  • rpb-5
  • rpb-6
  • rpb-7
  • rpb-8
  • rpb-9
  • taf-1
  • taf-10
  • taf-11
  • taf-11.3
  • taf-12
  • taf-13
  • taf-2
  • taf-3
  • taf-4
  • taf-5
  • taf-6.1
  • taf-7.1
  • taf-7.2
  • taf-9
  • tbp
  • tbp-1
  • ttb-1
  • xpb-1
  • xpd-1
Caenorhabditis elegans
RNA Polymerase II Promoter Escape
  • TFIIE-alpha
  • TFIIE-beta
  • ama-1
  • cdk-7
  • fust-1
  • gtf-2A2
  • gtf-2E1
  • gtf-2E2
  • gtf-2F1
  • gtf-2F2
  • gtf-2H1
  • gtf-2H2C
  • gtf-2H3
  • gtf-2H4
  • gtf-2H5
  • gtf-2e1
  • gtf-2e2
  • gtf-2f1
  • gtf-2f2
  • gtf-2h1
  • gtf-2h3
  • mnat-1
  • pqn-51
  • rpb-1
  • rpb-10
  • rpb-11
  • rpb-12
  • rpb-2
  • rpb-3
  • rpb-4
  • rpb-5
  • rpb-6
  • rpb-7
  • rpb-8
  • rpb-9
  • taf-1
  • taf-10
  • taf-11
  • taf-11.3
  • taf-12
  • taf-13
  • taf-2
  • taf-3
  • taf-4
  • taf-5
  • taf-6.1
  • taf-7.1
  • taf-7.2
  • taf-9
  • tbp
  • tbp-1
  • ttb-1
  • xpb-1
  • xpd-1
Caenorhabditis elegans
Presynaptic depolarization and calcium channel opening
  • STG-1
  • ccb-1
  • ccb-2
  • stg-1
  • stg-2
  • unc-2
  • unc-36
  • unc-72
Caenorhabditis elegans
Phase 2 - plateau phase
  • STG-1
  • ccb-1
  • ccb-2
  • egl-19
  • stg-1
  • stg-2
  • unc-36
  • unc-72
Caenorhabditis elegans
Phase 0 - rapid depolarisation
  • STG-1
  • ccb-1
  • ccb-2
  • egl-19
  • stg-1
  • stg-2
  • unc-36
  • unc-72
Caenorhabditis elegans
Nicotinamide salvaging
  • R107.2
  • Y18D10A.3
  • anmt-1
  • ndx-9
  • nprt-1
  • oct-1
  • slc-5A12
Caenorhabditis elegans
FGFR2 alternative splicing
  • R05D3.8
  • ama-1
  • cbp-20
  • cbp-80
  • gtf-2F1
  • gtf-2F2
  • gtf-2f1
  • gtf-2f2
  • hrp-1
  • ncbp-1
  • ncbp-2
  • ptb-1
  • rbp-1
  • rpb-1
  • rpb-10
  • rpb-11
  • rpb-12
  • rpb-2
  • rpb-3
  • rpb-4
  • rpb-5
  • rpb-6
  • rpb-7
  • rpb-8
  • rpb-9
  • sqd-1
Caenorhabditis elegans
Synthesis of glycosylphosphatidylinositol (GPI)
  • PIG-B
  • hpo-20
  • pigb-1
  • pigl-1
  • pign-1
  • pigv-1
  • pigw-1
Caenorhabditis elegans
Switching of origins to a post-replicative state
  • MCM7
  • let-358
  • lin-6
  • mcm-2
  • mcm-3
  • mcm-4
  • mcm-5
  • mcm-6
  • mcm-7
Caenorhabditis elegans
Glycerophospholipid biosynthesis
  • F52C9.3
Caenorhabditis elegans
Synthesis of bile acids and bile salts
  • F35C8.5
  • obr-1
  • obr-2
  • obr-4
Caenorhabditis elegans
Metabolism of folate and pterines
  • F25B5.6
  • Y106G6E.4
  • alh-3
  • dao-3
  • dhfr-1
  • folt-1
  • folt-2
  • folt-3
  • gly-1
  • mel-32
  • mthf-1
  • slc-25A32
  • slc-25a32
  • slc-46A
  • slc-46a
  • slcr-46.1
  • slcr-46.2
  • slcr-46.3
  • tag-330
Caenorhabditis elegans
Interconversion of polyamines
  • D2023.4
  • hpo-15
Caenorhabditis elegans
CS/DS degradation
  • Chnase
  • chhy-1
  • hex-1
  • sul-3
Caenorhabditis elegans
Amino acids regulate mTORC1
  • CeTor
  • F13H10.3
  • daf-15
  • flcn-1
  • fnip-2
  • fus-1
  • let-363
  • lmtr-2
  • lmtr-3
  • lmtr-5
  • mlst-8
  • raga-1
  • ragc-1
  • rdy-1
  • rheb-1
  • spe-5
  • unc-32
  • vha-10
  • vha-11
  • vha-12
  • vha-13
  • vha-14
  • vha-15
  • vha-16
  • vha-17
  • vha-2
  • vha-3
  • vha-4
  • vha-5
  • vha-6
  • vha-7
  • vha-8
  • vha-9
Caenorhabditis elegans
Regulation of PTEN gene transcription
  • CeTor
  • F13H10.3
  • daf-15
  • egl-43
  • let-363
  • lin-53
  • lmtr-2
  • lmtr-3
  • lmtr-5
  • mafr-1
  • mes-2
  • mes-6
  • mlst-8
  • raga-1
  • ragc-1
  • rba-1
  • rba-2
  • rheb-1
Caenorhabditis elegans
mTORC1-mediated signalling
  • CeTor
  • F13H10.3
  • daf-15
  • efk-1
  • fkb-2
  • fkb-8
  • ftt-1
  • ftt-2
  • ifg-1
  • let-363
  • lmtr-2
  • lmtr-3
  • lmtr-5
  • mlst-8
  • par-5
  • raga-1
  • ragc-1
  • rheb-1
  • rps-6
  • rsks-1
Caenorhabditis elegans
MTOR signalling
  • CeTor
  • F13H10.3
  • akt-1
  • akt-2
  • daf-15
  • ftt-1
  • ftt-2
  • let-363
  • lmtr-2
  • lmtr-3
  • lmtr-5
  • mlst-8
  • par-5
  • raga-1
  • ragc-1
  • rheb-1
Caenorhabditis elegans
Energy dependent regulation of mTOR by LKB1-AMPK
  • CeTor
  • F13H10.3
  • aak-1
  • aak-2
  • aakb-1
  • aakb-2
  • aakg-1
  • aakg-2
  • aakg-3
  • aakg-4
  • aakg-5
  • daf-15
  • let-363
  • lmtr-2
  • lmtr-3
  • lmtr-5
  • mlst-8
  • ppm-1.A
  • raga-1
  • ragc-1
  • rheb-1
Caenorhabditis elegans

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