GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **301 - 325** of **597** in total

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Pathway Name	Protein Name	UniProt ID ▼	Gene Symbol	Organism	GlyTouCan ID
Organic anion transporters	AT03939p AT30085p BcDNA.GH02431 Citrate transport protein Dietary and metabolic glutamate transporter FI02016p FI02094p FI02923p FI19428p1 FI19708p1 FI21844p1 FI22427p1 FI23731p1 GH05102p GH07529p GH10366p GH19970p GH23975p Glutamate carrier 1, isoform A IP12186p LD47995p LP04804p LP07366p LP19554p LP24461p MIP04353p MIP04453p Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily transporter 17, isoform F Major facilitator superfamily transporter 1 Major facilitator superfamily transporter 3 Mitochondrial 2-oxoglutarate/malate carrier protein Na[+]-dependent inorganic phosphate cotransporter, isoform A Putative inorganic phosphate cotransporter Putative sodium-dependent multivitamin transporter RE40577p Sodium-coupled monocarboxylate transporter 1 Sodium-coupled monocarboxylate transporter 2 Uncharacterized protein D3-100EF Uncharacterized protein, isoform A Vesicular glutamate transporter, isoform A	A1ZBD9 P83740 P91659 Q494G1 Q494G7 Q5BIE4 Q7JZR4 Q7K2N3 Q7KSQ0 Q8IN99 Q8INJ3 Q8IPY0 Q8MMD6 Q8MRP7 Q8MS66 Q8MS84 Q8SWV5 Q961Q9 Q9I7N1 Q9V7S5 Q9V9S4 Q9V9U1 Q9V9U2 Q9VAJ9 Q9VBK1 Q9VG14 Q9VGF7 Q9VGP3 Q9VJW8 Q9VKC9 Q9VLR8 Q9VPX2 Q9VQ85 Q9VQC0 Q9VR44 Q9VYG7 Q9W1Y9 Q9W1Z0 Q9W1Z1 Q9W1Z2 Q9W1Z3 Q9W3R0 Q9W4G7 Q9Y166	151989_at 8717 87A7-9/4 AA202479 BEST:LD07241 BG:DS07660.1 BcDNA.GH02431 BcDNA:GH02431 CG 1907 CG10879 CG11682 CG12490-RA CG14539 CG2003-RA CG2191-RA CG30265-RA CG31090 CG31262-RA CG31305 CG31668-PB CG32669 CG33124-PB CG42235-RD CG4330-RA CG6723-RA CG8451-PA CG8932 CG8934 CG8951 CG8957 CG8966 CG9657-RA CG9825-RA CT10168 CT27832 CT42567 D3-100EF DMGLUT DS07660.1 DV-Glut DVGLUT DVGluT DVGlut Dic1 DmCIC DmDic1p DmGC1 DmGC2 Dmel\CG10207 Dmel\CG10444 Dmel\CG12201 Dmel\CG12490 Dmel\CG15094 Dmel\CG15095 Dmel\CG15096 Dmel\CG18347 Dmel\CG18788 Dmel\CG1907 Dmel\CG2003 Dmel\CG2187 Dmel\CG2191 Dmel\CG2196 Dmel\CG30265 Dmel\CG30272 Dmel\CG3036 Dmel\CG31262 Dmel\CG31668 Dmel\CG33124 Dmel\CG3649 Dmel\CG40263 Dmel\CG42235 Dmel\CG4288 Dmel\CG4330 Dmel\CG4726 Dmel\CG5304 Dmel\CG5687 Dmel\CG6723 Dmel\CG6782 Dmel\CG6978 Dmel\CG7091 Dmel\CG7881 Dmel\CG8451 Dmel\CG8790 Dmel\CG8791 Dmel\CG9254 Dmel\CG9657 Dmel\CG9825 Dmel\CG9826 Dmel\CG9864 Dmel\CG9887 Dropo DvGluT DvGlut GC1 GC2 I(2)01810 MFS1 MFS10 MFS11 MFS12 MFS13 MFS14 MFS15 MFS15-RA MFS17 MFS2 MFS3 MFS9 Mfs3 Na/Pi-cotransporter NaPi-T NapiT Picot SLC25A1 SLC5A11 SMVT Sea Smvt VGLUT VGluT VGlut Vglut anon-100EF-D3 anon-87Ac anon-EST:Posey42 anon-WO0118547.88 anon-WO0140519.12 anon-WO0140519.99 bs24e02.y1 bumpel cg9657 dSLC5A10 dSLC5A12 dSLC5A13 dSLC5A14 dSLC5A2 dSLC5A3 dSLC5A5 dSLC5A6 dSLC5A7 dSLC5A8 dSLC5A9 dVGLUT dVGlut dmGlut dvGluT dvGlut dvglut kumpel l(2)01810 l(2)08717 l(3)EP3364 l208717 lethal (2) 08717 lethal(2)01810 lethal(2)08717 rumpel salt salt-RB sea sea[Delta24] smvt vGLUT vGluT vGlut vglut	Drosophila melanogaster (fruit fly)
Interconversion of nucleotide di- and triphosphates	Adenylate kinase 1, isoform B Adenylate kinase isoenzyme 6 homolog Adenylate kinase CTP synthase Deoxyuridine 5'-triphosphate nucleotidohydrolase GTP Nucleoside diphosphate kinase Ribonucleoside-diphosphate reductase large subunit Ribonucleoside-diphosphate reductase subunit M2 Thioredoxin-2 Thymidylate synthase UMP-CMP kinase Uncharacterized protein, isoform A dTMP kinase guanylate kinase	A1ZB29 O76511 P08879 P48591 P48592 Q7JYV7 Q8IQG9 Q9U915 Q9V3I1 Q9V429 Q9VA43 Q9VBI2 Q9VGU6 Q9VTB3 Q9VUL1	ADK-1 AK1 AK3 Adk1 Adk2 Adk3 Ak1 Ak3 Ak6 BcDNA.LD08534 BcDNA:LD08534 CTPsyn Cmpk Ctps DAK1 DAK3 Dak1 Dak1L Dak2 Dak3 Dm.UMP-CMP kinase Dmel\CG11811 Dmel\CG15543 Dmel\CG17146 Dmel\CG4584 Dmel\CG5757 Dmel\CG6092 Dmel\CG6612 K-pn LD08534 RnrL RnrS Trx-2 Ts UTPase adk1 anon-SAGE:Wang-077 anon-WO0118547.320 awd bs12h03.y1 bs34e10.y1 dUTPase dak1 oya	Drosophila melanogaster (fruit fly)
Choline catabolism	Choline transporter-like 1 GH11762p Sarcosine dehydrogenase aldehyde dehydrogenase (NAD(+))	A1ZAZ2 Q8SXQ1 Q9VY05 Q9VZE7	ALDH7A1 Aldh7A1 CT26924 Ctl1 Dmel\CG6385 Dmel\CG9512 Dmel\CG9629 Sardh sardh	Drosophila melanogaster (fruit fly)
Translation initiation complex formation	40S ribosomal protein S24 40S ribosomal protein S27 Eukaryotic initiation factor 4A Eukaryotic translation initiation factor 2 subunit 1 Eukaryotic translation initiation factor 2 subunit 2 Eukaryotic translation initiation factor 2 subunit 3 Eukaryotic translation initiation factor 3 subunit A Eukaryotic translation initiation factor 3 subunit B Eukaryotic translation initiation factor 3 subunit C Eukaryotic translation initiation factor 3 subunit D-1 Eukaryotic translation initiation factor 3 subunit E Eukaryotic translation initiation factor 3 subunit F-1 Eukaryotic translation initiation factor 3 subunit G-1 Eukaryotic translation initiation factor 3 subunit H Eukaryotic translation initiation factor 3 subunit I Eukaryotic translation initiation factor 3 subunit J Eukaryotic translation initiation factor 3 subunit K Eukaryotic translation initiation factor 3 subunit L Eukaryotic translation initiation factor 3 subunit M Eukaryotic translation initiation factor 4C Eukaryotic translation initiation factor 4E1 Eukaryotic translation initiation factor 4G1, isoform B Eukaryotic translation initiation factor 4G2, isoform A Eukaryotic translation initiation factor 4H Small ribosomal subunit protein eS10B Small ribosomal subunit protein eS12 Small ribosomal subunit protein eS17 Small ribosomal subunit protein eS19A Small ribosomal subunit protein eS1 Small ribosomal subunit protein eS21 Small ribosomal subunit protein eS25 Small ribosomal subunit protein eS26 Small ribosomal subunit protein eS28 Small ribosomal subunit protein eS4 Small ribosomal subunit protein eS6 Small ribosomal subunit protein eS7 Small ribosomal subunit protein eS8 Small ribosomal subunit protein uS10 Small ribosomal subunit protein uS12 Small ribosomal subunit protein uS13 Small ribosomal subunit protein uS14 Small ribosomal subunit protein uS15 Small ribosomal subunit protein uS17 Small ribosomal subunit protein uS19 Small ribosomal subunit protein uS2 Small ribosomal subunit protein uS3 Small ribosomal subunit protein uS4 Small ribosomal subunit protein uS5 Small ribosomal subunit protein uS7A Small ribosomal subunit protein uS8A Small ribosomal subunit protein uS9 Ubiquitin-ribosomal protein eS31 fusion protein eIF-4F 25 kDa subunit eIF-4F 25 kDa subunit eIF-4F 25 kDa subunit eIF-4F 25 kDa subunit eIF-4F 25 kDa subunit	A1ZAX1 A8DZ29 O02195 O76927 O77410 P13008 P15357 P17704 P29327 P31009 P38979 P39018 P41042 P41094 P41374 P41375 P48149 P48588 P48598 P55828 P55830 P55935 P80455 Q02748 Q03334 Q06559 Q0E940 Q0E9B6 Q24186 Q24208 Q7JVI3 Q7JZW2 Q7K550 Q8MLY8 Q8T3U2 Q9U9Q4 Q9VA91 Q9VAR1 Q9VBU9 Q9VCH1 Q9VCK0 Q9VEA1 Q9VH69 Q9VN25 Q9VN50 Q9VRY0 Q9VSB6 Q9VSG1 Q9VTU4 Q9VWG3 Q9W229 Q9W237 Q9W2D9 Q9W334 Q9W4X7 Q9W5B3 X2JC79	Adam BEST:GH01027 BcDNA:RE59324 BcDNA:RH55324 C3 CG11392 CG11393 CT24507 CT28485 CT31794 D-eIF1A D-eIF4c Dmel\CG10124 Dmel\CG10192 Dmel\CG10423 Dmel\CG10811 Dmel\CG1442 Dmel\CG32859 Dmel\CG3751 Dmel\CG4429 Dmel\CG8023 Dmel\CG8053 Dmel\CG8277 Dmel\CG8332 EG:BACR42I17.1 EIF4G EP(3)0935 EP935 Eif4G Eif4e Group I Int6 M(1)15D M(2)32A M(3)67C M(3)95A M(4)101 MRE9 NEST:bs04e06 Q9VBU9_DROME RNA-binding protein 2 RP4 RRM2 Rbp2 Rp S24 Rp S27 Rp17 RpS10 RpS10b RpS11 RpS12 RpS12E RpS13 RpS15 RpS15A RpS15Aa RpS16 RpS17 RpS18 RpS19 RpS19a RpS2 RpS20 RpS21 RpS23 RpS24 RpS25 RpS26 RpS27 RpS27A RpS28b RpS29 RpS3 RpS31 RpS3A RpS4 RpS5 RpS5a RpS6 RpS7 RpS8 RpS9 S15 S24 Tango7 Trip1 UB3-D UBI-F80 Ubi-m anon-EST:Liang-2.3 anon-EST:Posey137 anon-EST:Posey185 anon-EST:Posey295 anon-EST:Posey4 anon-EST:fe1B9 anon-WO0140519.227 cg4429 clone 2.3 deIF4G eIF-1A eIF-2beta eIF-2gamma eIF-3p40 eIF-3p48 eIF-3p66 eIF-4E eIF-4G eIF-4a eIF-4c eIF1A eIF2-alpha eIF2a eIF2alpha eIF2beta eIF2g eIF2gamma eIF3-S10 eIF3-S4 eIF3-S5-1 eIF3-S6 eIF3-S8 eIF3-S9 eIF3a eIF3b eIF3c eIF3d1 eIF3e eIF3f1 eIF3g1 eIF3ga eIF3h eIF3i eIF3j eIF3k eIF3l eIF3m eIF43 eIF4A eIF4E eIF4E-3 eIF4E-4 eIF4E-5 eIF4E-6 eIF4E-7 eIF4E1 eIF4E3 eIF4E4 eIF4E5 eIF4E6 eIF4E7 eIF4F eIF4G eIF4G-2 eIF4G1 eIF4G2 eIF4H eIF4H1 eIF4g eif3-S2 eif3-S3 elF4E-3 group I hen l(1)air8 l(2)SH2 2053 l(2)SH2053 l(2L)162 l(3)0139 l(3)L0139 lincRNA.S7087 ms(3)nc32 nc32 ofs oho23B p200 rrm2 s15 sop sta	Drosophila melanogaster (fruit fly)
Ribosomal scanning and start codon recognition	40S ribosomal protein S24 40S ribosomal protein S27 Eukaryotic initiation factor 4A Eukaryotic translation initiation factor 2 subunit 1 Eukaryotic translation initiation factor 2 subunit 2 Eukaryotic translation initiation factor 2 subunit 3 Eukaryotic translation initiation factor 3 subunit A Eukaryotic translation initiation factor 3 subunit B Eukaryotic translation initiation factor 3 subunit C Eukaryotic translation initiation factor 3 subunit D-1 Eukaryotic translation initiation factor 3 subunit E Eukaryotic translation initiation factor 3 subunit F-1 Eukaryotic translation initiation factor 3 subunit G-1 Eukaryotic translation initiation factor 3 subunit H Eukaryotic translation initiation factor 3 subunit I Eukaryotic translation initiation factor 3 subunit J Eukaryotic translation initiation factor 3 subunit K Eukaryotic translation initiation factor 3 subunit L Eukaryotic translation initiation factor 3 subunit M Eukaryotic translation initiation factor 4C Eukaryotic translation initiation factor 4E1 Eukaryotic translation initiation factor 4G1, isoform B Eukaryotic translation initiation factor 4G2, isoform A Eukaryotic translation initiation factor 4H Eukaryotic translation initiation factor 5 Small ribosomal subunit protein eS10B Small ribosomal subunit protein eS12 Small ribosomal subunit protein eS17 Small ribosomal subunit protein eS19A Small ribosomal subunit protein eS1 Small ribosomal subunit protein eS21 Small ribosomal subunit protein eS25 Small ribosomal subunit protein eS26 Small ribosomal subunit protein eS28 Small ribosomal subunit protein eS4 Small ribosomal subunit protein eS6 Small ribosomal subunit protein eS7 Small ribosomal subunit protein eS8 Small ribosomal subunit protein uS10 Small ribosomal subunit protein uS12 Small ribosomal subunit protein uS13 Small ribosomal subunit protein uS14 Small ribosomal subunit protein uS15 Small ribosomal subunit protein uS17 Small ribosomal subunit protein uS19 Small ribosomal subunit protein uS2 Small ribosomal subunit protein uS3 Small ribosomal subunit protein uS4 Small ribosomal subunit protein uS5 Small ribosomal subunit protein uS7A Small ribosomal subunit protein uS8A Small ribosomal subunit protein uS9 Ubiquitin-ribosomal protein eS31 fusion protein eIF-4F 25 kDa subunit eIF-4F 25 kDa subunit eIF-4F 25 kDa subunit eIF-4F 25 kDa subunit eIF-4F 25 kDa subunit	A1ZAX1 A8DZ29 O02195 O76927 O77410 P13008 P15357 P17704 P29327 P31009 P38979 P39018 P41042 P41094 P41374 P41375 P48149 P48588 P48598 P55828 P55830 P55935 P80455 Q02748 Q03334 Q06559 Q0E940 Q0E9B6 Q24186 Q24208 Q7JVI3 Q7JZW2 Q7K550 Q8MLY8 Q8T3U2 Q9U9Q4 Q9VA91 Q9VAR1 Q9VBU9 Q9VCH1 Q9VCK0 Q9VEA1 Q9VH69 Q9VN25 Q9VN50 Q9VRY0 Q9VSB6 Q9VSG1 Q9VTU4 Q9VWG3 Q9VXK6 Q9W229 Q9W237 Q9W2D9 Q9W334 Q9W4X7 Q9W5B3 X2JC79	Adam BEST:GH01027 BcDNA:RE59324 BcDNA:RH55324 C3 CG11392 CG11393 CT24507 CT28485 CT31794 D-eIF1A D-eIF4c Dmel\CG10124 Dmel\CG10192 Dmel\CG10423 Dmel\CG10811 Dmel\CG1442 Dmel\CG32859 Dmel\CG3751 Dmel\CG4429 Dmel\CG8023 Dmel\CG8053 Dmel\CG8277 Dmel\CG8332 EG:BACR42I17.1 EIF4G EP(3)0935 EP935 Eif4G Eif4e Group I Int6 M(1)15D M(2)32A M(3)67C M(3)95A M(4)101 MRE9 NEST:bs04e06 Q9VBU9_DROME RNA-binding protein 2 RP4 RRM2 Rbp2 Rp S24 Rp S27 Rp17 RpS10 RpS10b RpS11 RpS12 RpS12E RpS13 RpS15 RpS15A RpS15Aa RpS16 RpS17 RpS18 RpS19 RpS19a RpS2 RpS20 RpS21 RpS23 RpS24 RpS25 RpS26 RpS27 RpS27A RpS28b RpS29 RpS3 RpS31 RpS3A RpS4 RpS5 RpS5a RpS6 RpS7 RpS8 RpS9 S15 S24 Tango7 Trip1 UB3-D UBI-F80 Ubi-m anon-EST:Liang-2.3 anon-EST:Posey137 anon-EST:Posey185 anon-EST:Posey295 anon-EST:Posey4 anon-EST:fe1B9 anon-WO0140519.227 cg4429 clone 2.3 deIF4G eIF-1A eIF-2beta eIF-2gamma eIF-3p40 eIF-3p48 eIF-3p66 eIF-4E eIF-4G eIF-4a eIF-4c eIF1A eIF2-alpha eIF2a eIF2alpha eIF2beta eIF2g eIF2gamma eIF3-S10 eIF3-S4 eIF3-S5-1 eIF3-S6 eIF3-S8 eIF3-S9 eIF3a eIF3b eIF3c eIF3d1 eIF3e eIF3f1 eIF3g1 eIF3ga eIF3h eIF3i eIF3j eIF3k eIF3l eIF3m eIF43 eIF4A eIF4E eIF4E-3 eIF4E-4 eIF4E-5 eIF4E-6 eIF4E-7 eIF4E1 eIF4E3 eIF4E4 eIF4E5 eIF4E6 eIF4E7 eIF4F eIF4G eIF4G-2 eIF4G1 eIF4G2 eIF4H eIF4H1 eIF4g eIF5 eif3-S2 eif3-S3 elF4E-3 group I hen l(1)air8 l(2)SH2 2053 l(2)SH2053 l(2L)162 l(3)0139 l(3)L0139 lincRNA.S7087 ms(3)nc32 nc32 ofs oho23B p200 rrm2 s15 sop sta	Drosophila melanogaster (fruit fly)
L13a-mediated translational silencing of Ceruloplasmin expression	40S ribosomal protein S24 40S ribosomal protein S27 60S ribosomal protein L21 60S ribosomal protein L27 60S ribosomal protein L35 Eukaryotic initiation factor 4A Eukaryotic translation initiation factor 2 subunit 1 Eukaryotic translation initiation factor 2 subunit 2 Eukaryotic translation initiation factor 2 subunit 3 Eukaryotic translation initiation factor 3 subunit A Eukaryotic translation initiation factor 3 subunit B Eukaryotic translation initiation factor 3 subunit C Eukaryotic translation initiation factor 3 subunit D-1 Eukaryotic translation initiation factor 3 subunit E Eukaryotic translation initiation factor 3 subunit F-1 Eukaryotic translation initiation factor 3 subunit G-1 Eukaryotic translation initiation factor 3 subunit H Eukaryotic translation initiation factor 3 subunit I Eukaryotic translation initiation factor 3 subunit J Eukaryotic translation initiation factor 3 subunit K Eukaryotic translation initiation factor 3 subunit L Eukaryotic translation initiation factor 3 subunit M Eukaryotic translation initiation factor 4C Eukaryotic translation initiation factor 4E1 Eukaryotic translation initiation factor 4G1, isoform B Eukaryotic translation initiation factor 4G2, isoform A Eukaryotic translation initiation factor 4H FI01658p GH17761p Large ribosomal subunit protein P1 Large ribosomal subunit protein P2 Large ribosomal subunit protein eL13 Large ribosomal subunit protein eL14 Large ribosomal subunit protein eL15 Large ribosomal subunit protein eL18 Large ribosomal subunit protein eL19 Large ribosomal subunit protein eL20 Large ribosomal subunit protein eL22 Large ribosomal subunit protein eL22 Large ribosomal subunit protein eL24 Large ribosomal subunit protein eL28 Large ribosomal subunit protein eL29 Large ribosomal subunit protein eL30 Large ribosomal subunit protein eL31 Large ribosomal subunit protein eL32 Large ribosomal subunit protein eL33 Large ribosomal subunit protein eL36 Large ribosomal subunit protein eL37A Large ribosomal subunit protein eL38 Large ribosomal subunit protein eL39 Large ribosomal subunit protein eL42 Large ribosomal subunit protein eL6 Large ribosomal subunit protein eL8 Large ribosomal subunit protein uL10 Large ribosomal subunit protein uL11 Large ribosomal subunit protein uL13 Large ribosomal subunit protein uL14 Large ribosomal subunit protein uL15 Large ribosomal subunit protein uL16 Large ribosomal subunit protein uL18 Large ribosomal subunit protein uL1 Large ribosomal subunit protein uL22 Large ribosomal subunit protein uL24 Large ribosomal subunit protein uL2 Large ribosomal subunit protein uL30 Large ribosomal subunit protein uL3 Large ribosomal subunit protein uL4 Large ribosomal subunit protein uL5 Large ribosomal subunit protein uL6 Small ribosomal subunit protein eS10B Small ribosomal subunit protein eS12 Small ribosomal subunit protein eS17 Small ribosomal subunit protein eS19A Small ribosomal subunit protein eS1 Small ribosomal subunit protein eS21 Small ribosomal subunit protein eS25 Small ribosomal subunit protein eS26 Small ribosomal subunit protein eS28 Small ribosomal subunit protein eS4 Small ribosomal subunit protein eS6 Small ribosomal subunit protein eS7 Small ribosomal subunit protein eS8 Small ribosomal subunit protein uS10 Small ribosomal subunit protein uS12 Small ribosomal subunit protein uS13 Small ribosomal subunit protein uS14 Small ribosomal subunit protein uS15 Small ribosomal subunit protein uS17 Small ribosomal subunit protein uS19 Small ribosomal subunit protein uS2 Small ribosomal subunit protein uS3 Small ribosomal subunit protein uS4 Small ribosomal subunit protein uS5 Small ribosomal subunit protein uS7A Small ribosomal subunit protein uS8A Small ribosomal subunit protein uS9 Ubiquitin-ribosomal protein eS31 fusion protein eIF-4F 25 kDa subunit eIF-4F 25 kDa subunit eIF-4F 25 kDa subunit eIF-4F 25 kDa subunit eIF-4F 25 kDa subunit	A1ZAX1 A8DZ29 O02195 O16130 O16797 O17445 O61231 O76927 O77410 P04359 P05389 P08570 P09180 P13008 P15357 P17704 P19889 P29327 P31009 P32100 P36241 P38979 P39018 P41042 P41092 P41093 P41094 P41126 P41374 P41375 P46222 P46223 P48149 P48159 P48588 P48598 P49630 P50882 P50887 P55828 P55830 P55841 P55935 P80455 Q02748 Q03334 Q06559 Q0E940 Q0E9B6 Q24154 Q24186 Q24208 Q7JVI3 Q7JZW2 Q7K550 Q8MLY8 Q8T3U2 Q9U9Q4 Q9V3G1 Q9V597 Q9V9M7 Q9V9W3 Q9VA91 Q9VAR1 Q9VBN5 Q9VBU9 Q9VCH1 Q9VCK0 Q9VEA1 Q9VH69 Q9VJ19 Q9VJY6 Q9VLT7 Q9VN25 Q9VN50 Q9VNB9 Q9VNE9 Q9VRY0 Q9VS34 Q9VSB6 Q9VSG1 Q9VTP4 Q9VTU4 Q9VVU2 Q9VWG3 Q9VXX8 Q9VZS5 Q9W0A8 Q9W1B9 Q9W1T1 Q9W229 Q9W237 Q9W2D9 Q9W334 Q9W3W8 Q9W418 Q9W499 Q9W4X7 Q9W5B3 Q9W5N2 Q9W5R8 X2JC79	153215_at AP3 Adam Ape BEST:GH01027 BcDNA:RE09547 BcDNA:RE25263 BcDNA:RE59324 BcDNA:RH06526 BcDNA:RH09938 BcDNA:RH55324 C3 CG11392 CG11393 CG18282 CR32744 CT24507 CT28485 CT31794 D-eIF1A D-eIF4c DmUb DmUbi-p5E Dmel\CG10124 Dmel\CG10192 Dmel\CG10423 Dmel\CG10652 Dmel\CG10811 Dmel\CG11522 Dmel\CG12775 Dmel\CG1442 Dmel\CG2099 Dmel\CG3195 Dmel\CG32744 Dmel\CG32859 Dmel\CG3751 Dmel\CG4111 Dmel\CG4429 Dmel\CG4759 Dmel\CG6846 Dmel\CG7424 Dmel\CG7977 Dmel\CG8023 Dmel\CG8053 Dmel\CG8277 Dmel\CG8332 Dmel\CG9871 EG:BACR42I17.1 EIF4G EP(3)0935 EP935 Eif4G Eif4e Group I Int6 L12 L21e L23 L23A L23a L24 L26 L30 L30e L35a L44e M(1)15D M(1)1B M(2)21C M(2)32A M(2)32D M(2)60E M(3)67C M(3)95A M(3)99D M(4)101 MRE9 NEST:bs04e06 PBP-3 Q9VBU9_DROME Q9W1B9_DROME Qm RNA-binding protein 2 RP4 RPA2 RPL11A RPL12 RPL21 RPL23a RPL26 RPL27 RPL30 RPL6 RRM2 Rbp2 Rp L12 Rp L21 Rp L23A Rp L26 Rp L30 Rp L35 Rp L35A Rp L6 Rp S24 Rp S27 Rp17 RpL1 RpL10 RpL10Ab RpL11 RpL12 RpL13 RpL13A RpL14 RpL15 RpL17 RpL17A RpL18 RpL18A RpL19 RpL21 RpL22 RpL22-like RpL22-like-RA RpL23 RpL23A RpL23a RpL24 RpL25 RpL26 RpL27 RpL27A RpL27Aa RpL27Ab RpL27a2 RpL27e RpL28 RpL29 RpL3 RpL30 RpL31 RpL32 RpL35 RpL35-RB RpL35A RpL35e RpL36 RpL36A RpL37-1 RpL37a RpL38 RpL39 RpL4 RpL43 RpL46 RpL5 RpL6 RpL7 RpL7A RpL8 RpL9 RpLP0 RpLP1 RpLP2 RpP0 RpP1 RpP2 RpS10 RpS10b RpS11 RpS12 RpS12E RpS13 RpS15 RpS15A RpS15Aa RpS16 RpS17 RpS18 RpS19 RpS19a RpS2 RpS20 RpS21 RpS23 RpS24 RpS25 RpS26 RpS27 RpS27A RpS28b RpS29 RpS3 RpS31 RpS3A RpS4 RpS5 RpS5a RpS6 RpS7 RpS8 RpS9 Rpl12 Rpl30 Rpl35A S15 S24 SURF-3 Tango7 Trip1 UB UB3-D UBI-F80 Ub Ubi Ubi-m Ubi-p5E Ubiq ZITI anon-EST:Liang-1.4 anon-EST:Liang-2.3 anon-EST:Posey137 anon-EST:Posey157 anon-EST:Posey18 anon-EST:Posey185 anon-EST:Posey236 anon-EST:Posey295 anon-EST:Posey30 anon-EST:Posey39 anon-EST:Posey4 anon-EST:fe1B2 anon-EST:fe1B9 anon-EST:fe1C12 anon-EST:fe1D4 anon-EST:fe2D1 anon-WO0140519.227 bbc1 cg4429 chr3R:21510055..21510241 clone 1.4 clone 2.3 deIF4G eIF-1A eIF-2beta eIF-2gamma eIF-3p40 eIF-3p48 eIF-3p66 eIF-4E eIF-4G eIF-4a eIF-4c eIF1A eIF2-alpha eIF2a eIF2alpha eIF2beta eIF2g eIF2gamma eIF3-S10 eIF3-S4 eIF3-S5-1 eIF3-S6 eIF3-S8 eIF3-S9 eIF3a eIF3b eIF3c eIF3d1 eIF3e eIF3f1 eIF3g1 eIF3ga eIF3h eIF3i eIF3j eIF3k eIF3l eIF3m eIF43 eIF4A eIF4E eIF4E-3 eIF4E-4 eIF4E-5 eIF4E-6 eIF4E-7 eIF4E1 eIF4E3 eIF4E4 eIF4E5 eIF4E6 eIF4E7 eIF4F eIF4G eIF4G-2 eIF4G1 eIF4G2 eIF4H eIF4H1 eIF4g eRpL22-like eRpL23a eif3-S2 eif3-S3 elF4E-3 group I hen l(1)air8 l(2)01265 l(2)SH0229 l(2)SH2 0229 l(2)SH2 2053 l(2)SH2053 l(2)k09918 l(2L)162 l(3)0139 l(3)L0139 lincRNA.S5499 lincRNA.S7087 ms(3)nc32 nc32 ofs oho23B p200 plume rp21C rp46 rp49 rpA1 rpL22-like rpL25 rpl23a rpl6 rrm2 s15 sop sta yip6	Drosophila melanogaster (fruit fly)
MHC class II antigen presentation	Cathepsin B1, isoform A Cathepsin L GH19763p LD36817p Peptidase A1 domain-containing protein Putative cysteine proteinase CG12163 RH39096p Uncharacterized protein	A1ZAU4 Q7K0S6 Q95029 Q9VEK4 Q9VHA5 Q9VKY4 Q9VN93 Q9VY87	BEST:GH19547 CB CG-10992 CG12163 CG4847-RD CTSB1 CathB Cp1 CtsB CtsB1 CtsK2 CtsL2 CtsL4 Dmel\CG10992 Dmel\CG4847 Dmel\CG5367 Dmel\CG5860 Dmel\CG6347 Dmel\CG9427 FBgn0038506 anon-EST:ParkEST132 fs(2)50Ca	Drosophila melanogaster (fruit fly)
Degradation of the extracellular matrix	ADAM10 endopeptidase Basigin, isoform G Cathepsin L Dorsal-ventral patterning protein tolloid Dpr-interacting protein alpha, isoform A Dpr-interacting protein beta, isoform C Dpr-interacting protein delta, isoform D Dpr-interacting protein epsilon Dpr-interacting protein eta, isoform B Dpr-interacting protein gamma Dpr-interacting protein kappa, isoform A Dpr-interacting protein lambda Dpr-interacting protein theta Dpr-interacting protein zeta, isoform A Factor of interpulse interval Insulin-like growth factor-binding protein complex acid labile subunit LD36817p Lachesin Matrix metalloproteinase 1, isoform C Matrix metalloproteinase-2 Mind-meld, isoform J Neural cell adhesion molecule 2 Protein tolkin Putative neural-cadherin 2 RH39096p Uncharacterized protein, isoform D Uncharacterized protein	A1ZAU4 A4IJ70 A8JNC7 B7Z153 M9NDT2 P25723 Q24372 Q59E14 Q7K0S6 Q7KTJ7 Q7PLL7 Q8IP70 Q8MPP3 Q95029 Q9VAR6 Q9VC47 Q9VJB6 Q9VJW9 Q9VKY4 Q9VLF0 Q9VMN6 Q9VMN9 Q9VR25 Q9VT89 Q9W122 Q9W4R3 X2JE21	11410 135/10 14010 14521 15630 31646 31708 31814 32791 33543 34391 34Da 40378 42343 42368 ADAM10 BEST:GH19547 BG:DS07660.3 BG:DS08249.1 BP1062 BSG BcDNA:GH21853 BcDNA:RE23430 Bsg CG12564 CG12565 CG13019 CG13020 CG13103 CG13104 CG13105 CG13981 CG14008 CG14009 CG14583 CG15214 CG15354 CG15355 CG15603 CG15604 CG31646-RA CG31708-RA CG31970 CG33295 CG34019 CG40378 CG40378-RB CG42644 CG43676 CG4814 CG4847-RD CG6590 CG9163 CG9508 CG9511 CT15465 CT20492 CT22079 CT26192 CT32337 CT32338 CT33566 CT33567 CT34248 CT34319 CT35147 CT35293 CT35363 CT35364 CT35785 CadN2 Cp1 CtsK2 CtsL2 CtsL4 DIP-alpha DIP-beta DIP-delta DIP-epsilon DIP-eta DIP-gamma DIP-kappa DIP-lambda DIP-theta DIP-zeta Dm1-MMP Dmel\CG14010 Dmel\CG14521 Dmel\CG15312 Dmel\CG15630 Dmel\CG31605 Dmel\CG31646 Dmel\CG31708 Dmel\CG31814 Dmel\CG32055 Dmel\CG32791 Dmel\CG33543 Dmel\CG34391 Dmel\CG42252 Dmel\CG42343 Dmel\CG42368 Dmel\CG45781 Dmel\CG4847 Dmel\CG4859 Dmel\CG5367 Dmel\CG6347 Dmel\CG7147 Fipi GS11410 KUZ Kuz Lac MMP MMP-1 MMP1 MMp1 Mmp 1 Mmp-1 Mmp1 Mmp2 NP6293 anon-WO0140519.196 basigin br38 bsg dMMP1 dm1-MMP dmmp1 fipi fs(2)50Ca gel kuz l(2)03782 l(2)06243 l(2)34Da l(2)SH1217 l(2)SH2 1217 l(2)br38 l(2)c00136 l(2)k01403 l(2)k04809 l(2)k06338 l(2)k09030 l(2)k13638 l(2)k14308 l34Da mmd mmp-1 mmp1 ms(2)08318 pp-CT34319 pp-CT34320 pp-CT34321 soy nut tld tlr tlr-1 tok	Drosophila melanogaster (fruit fly)
Surfactant metabolism	ATP binding cassette subfamily A, isoform B Adenosine receptor, isoform A BcDNA.GH08312 Box A-binding factor Cathepsin D FI19405p1 GATA-binding factor A GATAe, isoform A Peptidase A1 domain-containing protein Testin adenosine deaminase	A1ZAT5 P52168 P52172 Q7K485 Q9VAA2 Q9VEK4 Q9VF00 Q9VKZ0 Q9VRG4 Q9VVK5 Q9Y125	ABCA ABF ADGDF-A ADGF ADGF-A Abca3 Adgf-A Adgf-a AdgfA AdoR Apa BcDNA.GH08312 BcDNA:GH08312 CATH CG10278-PA CG17134 CT3996 CTSD CathD DAPA DmAdoR Dmel\CG10278 Dmel\CG12070 Dmel\CG1548 Dmel\CG1718 Dmel\CG5034 Dmel\CG5860 Dmel\CG5992 Dmel\CG6522 Dmel\CG9753 FBgn0038506 GATA-A GATAd GATAd-RA GATAe Ov9 P110 Sap-R Sap-r Sapr T17 Tes adgf-a adgfa adoR anon-EST:ParkEST270 anon-WO0170980.109 anon-WO0170980.110 cathD dABCA dADOR dAdoR dGATA-D dGATA-E dGATAd dGATAe dTES pnr sap-r srp	Drosophila melanogaster (fruit fly)
RHOJ GTPase cycle	Cdc42 homolog EG GTPase-activating protein CdGAPr LD20667p Pi3K21B, isoform B Rho GTPase-activating protein 100F Rho GTPase-activating protein 190 Rho GTPase-activating protein 68F Rho GTPase-activating protein Graf Trio, isoform A Uncharacterized protein, isoform A Uncharacterized protein, isoform B	A1ZAQ3 A1ZAQ4 O46094 P40793 Q7KTZ2 Q7KVD1 Q9V9S7 Q9VIS1 Q9VPI9 Q9VTU3 Q9VX32 X2JDY8	0368/10 0959/14 1372/03 1386/06 BEST:LD36950 CG15612 CG15613 CG9208 CdGAPr Cdc42 DTrio Dm zir Dmel\CG11376 Dmel\CG15611 Dmel\CG18214 Dmel\CG2699 Dmel\CG30456 Dmel\CG3573 Dp60 EG:86E4.5 FBgn 31216 Graf M89 Ocrl P60 PI(3)K PI3 kinase PI3K PI3K-p60 PI3K-reg PI3K21B PI[[3]]K Pi3K Pi3K21B Pi3Kp60 Pi3k21B RhoGAP100F RhoGAP68F RhoGAPp190 Syd-1 TRIO Trio UNC-73/Trio Zir anon-EST:Posey54 dOCRL dOcrl dP60 dPI3K dTrio deltap60 docrl dp60 droPIK57 l(3)036810 l(3)6D104 l(3)S036810 l(3)S095914 l(3)S137203 l(3)S138606 l(3)S[1372/3] l(3)S[1386/06] l(3)trio ocrl p60 p85 trio	Drosophila melanogaster (fruit fly)
Assembly of active LPL and LIPC lipase complexes	FI01450p FI01825p FI22312p1 Furin-like protease 1, isoforms 1/1-X/2 GH01208p GH15759p IP10831p IP12247p IP13478p LD47264p LP07116p LP08709p Lipase domain-containing protein Lipase domain-containing protein Lipase domain-containing protein Lipase domain-containing protein MIP10846p1 MIP30168p Protein quiver RE23868p RE51539p RE56633p RH13166p RT07891p Uncharacterized protein, isoform A Uncharacterized protein, isoform A Uncharacterized protein, isoform B Uncharacterized protein, isoform B Uncharacterized protein, isoform C Uncharacterized protein, isoform C Uncharacterized protein, isoform C	A1ZAL5 A1ZBJ7 A8DYT7 M9MRT1 M9NFL7 P26016 Q0E8T1 Q4V566 Q7K3Z8 Q9V9P0 Q9VB88 Q9VB89 Q9VB90 Q9VB91 Q9VB92 Q9VB93 Q9VB94 Q9VBQ2 Q9VEY9 Q9VJH1 Q9VLU1 Q9VQ96 Q9VQC2 Q9VRW5 Q9VU78 Q9VX01 Q9VX69 Q9VX70 Q9VZN6 Q9W304 Q9W448	141233_at BP1009 CG10163-RA CG11535 CG18641-RB CG31684 CG31686 CG34448-RA CG6847-RA CG9966 CT41369 DmelL1 DmelL2 DmelL3 DmelL4 DmelL5 DmelL6 DmelL7 Dmel\CG10116 Dmel\CG10163 Dmel\CG10357 Dmel\CG13282 Dmel\CG14034 Dmel\CG17191 Dmel\CG17192 Dmel\CG17292 Dmel\CG18258 Dmel\CG18641 Dmel\CG1986 Dmel\CG34045 Dmel\CG34447 Dmel\CG34448 Dmel\CG4267 Dmel\CG4582 Dmel\CG4979 Dmel\CG5162 Dmel\CG5665 Dmel\CG5966 Dmel\CG6271 Dmel\CG6277 Dmel\CG6283 Dmel\CG6295 Dmel\CG6296 Dmel\CG6431 Dmel\CG6472 Dmel\CG6675 Dmel\CG6847 Dmel\CG7367 Fur1 TL anon-SAGE:Wang-051 anon-SAGE:Wang-122 cg5665 chr2L_10724193_10724543.0 sxe2	Drosophila melanogaster (fruit fly)
Nicotinamide salvaging	ATP-dependent (S)-NAD(P)H-hydrate dehydratase Beta-alanine transporter FI02016p NAD(P)H-hydrate epimerase Nicotinate phosphoribosyltransferase Protein mono-ADP-ribosyltransferase Parp16	A1ZAG4 Q961J5 Q9VGP3 Q9VQX4 Q9VVW8 Q9W2Y3	Balat CG6723-RA Dmel\CG6723 Naprt Naxd Naxe Parp16 bumpel dSLC5A8	Drosophila melanogaster (fruit fly)
Metal sequestration by antimicrobial proteins	Transferrin 2 Transferrin Transferrin Uncharacterized protein	A1ZAC0 Q8IND7 Q9VTZ5 Q9VWV6	143958_at CG14872 Dmel\CG3666 Dmel\CG44014 Dmel\CG6186 MTf TSF1 Tf Trf Tsf1 Tsf2 Tsf3 Tsf3-RA anon-EST:Posey265 lincRNA.S9601 tsf1 tsf3	Drosophila melanogaster (fruit fly)
Receptor-type tyrosine-protein phosphatases	AT31531p Chaoptin Liprin-alpha, isoform E Protein singed wings 2 Protein windpipe Tyrosine-protein phosphatase Lar protein-tyrosine-phosphatase	A1ZAB3 M9PCD4 P12024 P16621 Q8SXT3 Q9VU88 Q9W266	CHT CT18044 DLiprin DLiprin-alpha DPTP52F Dliprin-alpha Dmel\CG10743 Dmel\CG11199 Dmel\CG18243 LIP LIP.1 LIP1 LPR Lar Liprin Liprin-alpha Liprin-beta PTP52F Ptp52F Ptp52F-RB chp lip-alpha liprin liprin-alpha lpr oos ptp52F swi2 wdp	Drosophila melanogaster (fruit fly)
Synaptic adhesion-like molecules	Disks large 1 tumor suppressor protein Eye-enriched kainate receptor, isoform B FI01405p Flotillin-1 Flotillin-2 Glutamate [NMDA] receptor subunit 1 Glutamate receptor 1 Glutamate receptor IB, isoform B IP13856p Ionotropic receptor 21a Ionotropic receptor 25a Ionotropic receptor 8a Ionotropic receptor 93a Kekkon 5, isoform A NMDA receptor 2, isoform C Reticulon-like protein Tyrosine-protein phosphatase Lar protein-tyrosine-phosphatase	A1ZAB3 E1JHT6 E9NA96 M9PHV5 O61491 O61492 P16621 P31007 Q03445 Q0KIF2 Q24418 Q9V4A0 Q9VDH6 Q9VPI2 Q9VW78 Q9VWI6 Q9W365 Q9W581	142893_at 76b 79G8T CG11155-RA CG12122 CG12666 CG14793 CG14794 CG18623 CG42509 CG4481 CG8895 CT10486 CT18044 CT22733 CT30863 CT34603 CT36399 CT7438 DGluR-IB DPTP52F Dm_3L:43677 DmelCG11155 DmelCG9935 DmelGlu-R1B DmelIR76b DmelIR8a DmelNmdar2 Dmel\CG11155 Dmel\CG12199 Dmel\CG18243 Dmel\CG32704 Dmel\CG33113 Dmel\CG33513 Dmel\CG43743 Dmel\CG7385 Dmel\CG9935 DrNR2 EG:80H7.7 ESTS:79G8T Ekar FLODM-1 FLODm-2 Flo Flo-1 Flo-2 Flo1 Flo2 G9 Glu-R1B Glu-RI Glu-RIB GluR1B GluRIA GluRIB GluRIb IR76B IR76b IR8a Ir21a Ir25a Ir76b Ir8a Ir93a Kek5 Lar NMDA-R2 NMDAR NMDAR2 NR1 NR2 Nmdar1 Nmdar2 PTP52F Ptp52F Ptp52F-RB RTNL1 Retl1 Rtn1 Rtnl-1 Rtnl1 anon-sts34 dNR2 dglur-IB dlg1 dnmdar-II dsNR2 ekar ir76b kek-5 kek5 l(1)dlg1 nmr nr2 ptp52F rtnl1	Drosophila melanogaster (fruit fly)
NCAM signaling for neurite out-growth	Chromosomal serine/threonine-protein kinase JIL-1 Cyclic AMP response element-binding protein B Growth factor receptor-bound protein 2 Karst, isoform E Mitogen-activated protein kinase ERK-A Protein son of sevenless Ras-like protein 1 Spectrin alpha chain Spectrin beta chain Tyrosine-protein kinase Src64B Tyrosine-protein phosphatase Lar protein-tyrosine-phosphatase	A1ZAB3 A8JNJ6 P00528 P08646 P13395 P16621 P26675 P40417 Q00963 Q08012 Q9V3I5 Q9VWW0	CT18044 CrebB CrebB-17A DPTP52F Dmel\CG12008 Dmel\CG18243 E(sev)2B ERKa Grb2 JIL-1 Karst Kst Lar MAPK PTP52F Ptp52F Ptp52F-RB Ras1 Ras85D SPEC-A Sos Spec-b Spec-beta[[H]] Src1 Src64B alpha-Spec beta-Spec beta-Spectrin betaH betaH-Spec betaH-spectrin betaHS betaHSpec beta[[H]] beta[[H]]-SPEC beta[[H]]-Sp beta[[H]]-Spec beta[[H]]-Spectrin beta[[H]]spectrin beta[[Heavy]]spectrin beta[[heavy]]-Spec beta[[heavy]]-Spectrin beta[[heavy]]spectrin betah-Spec drk kst l(3)01318 ptp52F rl	Drosophila melanogaster (fruit fly)
Insulin receptor recycling	Insulin-like receptor Probable V-type proton ATPase subunit d 2 Tyrosine-protein phosphatase Lar V-type proton ATPase 16 kDa proteolipid subunit c V-type proton ATPase 16 kDa proteolipid subunit c V-type proton ATPase catalytic subunit A isoform 2 V-type proton ATPase subunit B V-type proton ATPase subunit C V-type proton ATPase subunit D 1 V-type proton ATPase subunit E V-type proton ATPase subunit F 1 V-type proton ATPase subunit G V-type proton ATPase subunit H V-type proton ATPase subunit S1 V-type proton ATPase subunit a V-type proton ATPase subunit a V-type proton ATPase subunit a V-type proton ATPase subunit a V-type proton ATPase subunit a V-type proton ATPase subunit d 1 V-type proton ATPase subunit V-type proton ATPase subunit V-type proton ATPase subunit V-type proton ATPase subunit protein-tyrosine-phosphatase	A1ZAB3 A1ZBF7 P09208 P16621 P23380 P31409 P54611 Q24583 Q27331 Q7JR49 Q9V3J1 Q9V7D2 Q9V7N5 Q9VCQ3 Q9VE75 Q9VE77 Q9VEQ6 Q9VFE3 Q9VKF6 Q9VP18 Q9VZE9 Q9VZG7 Q9W4P5 Q9XZ10 Q9XZH6	ATP6AP1 ATP6V0M9.7-2 BcDNA:AT03238 BcDNA:LD21248 BcDNA:LD21735 CG7625-RA CG7679 CT18044 DPTP52F Dir-a Dmel\CG11589 Dmel\CG12602 Dmel\CG1268 Dmel\CG14909 Dmel\CG1709 Dmel\CG18243 Dmel\CG18617 Dmel\CG30329 Dmel\CG7007 Dmel\CG7625 Dmel\CG7678 IR InR Inr-a Lar PTP52F Ptp52F Ptp52F-RB V0 V0a V0c V100 V100-1 V100-2 VHA VHAA2 Vha M9.7-2 Vha100 Vha100-1 Vha100-2 Vha100-3 Vha100-4 Vha100-5 Vha100-5-RA Vha13 Vha14 Vha14-1 Vha16 Vha16-1 Vha26 Vha36 Vha36-1 Vha44 Vha55 Vha68-2 VhaAC39 VhaAC39-1 VhaAC39-2 VhaAC45 VhaM9.7-1 VhaM9.7-2 VhaM9.7-3 VhaM9.7-4 VhaM9.7-a VhaM9.7-b VhaM9.7-c VhaM9.7-d VhaPPA1 VhaPPA1-1 VhaSFD anon-WO0118547.296 anon-WO0118547.551 l(2)06072 ptp52F v0a1 v100 vha vha100-1 vha100-2 vha100-3 vha100-4 vha100-5 vhaM9.2-1 vhaM9.2-2 vhaM9.7-1 vhaM9.7-2 vhaM9.7-3 vhaM9.7-4 vhaM9.7-b vhaPPA1-1	Drosophila melanogaster (fruit fly)
HS-GAG biosynthesis	Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase Dally-like, isoform A Division abnormally delayed protein Dpr-interacting protein alpha, isoform A Dpr-interacting protein beta, isoform C Dpr-interacting protein delta, isoform D Dpr-interacting protein epsilon Dpr-interacting protein eta, isoform B Dpr-interacting protein gamma Dpr-interacting protein kappa, isoform A Dpr-interacting protein lambda Dpr-interacting protein theta Dpr-interacting protein zeta, isoform A Exostosin-1 Exostosin-2 Factor of interpulse interval GH20068p Heparan sulfate 3-O sulfotransferase-B, isoform A Heparan-sulfate 6-O-sulfotransferase Heparin sulfate O-sulfotransferase Lachesin Neural cell adhesion molecule 2 SP2353, isoform A Syndecan UDP-sugar transporter UST74c Uncharacterized protein, isoform D	A1ZA87 A4IJ70 A8JNC7 B7Z153 M9NDT2 P25722 P49415 Q24114 Q24372 Q59E14 Q7PLL7 Q8IP70 Q8MRE7 Q95YI5 Q9V3L1 Q9V730 Q9VAR6 Q9VDR6 Q9VLF0 Q9VMN6 Q9VMN9 Q9VR25 Q9VUG1 Q9VWJ7 Q9W4R3 Q9Y169	14010 14521 15630 31646 31708 31814 32791 33543 34391 40378 42343 42368 BG:DS08249.1 BP1062 BcDNA:GH12319 BcDNA:RE23430 CG11683 CG12564 CG12565 CG13019 CG13020 CG13103 CG13104 CG13105 CG13981 CG14008 CG14009 CG14583 CG15074 CG15075 CG15076 CG15214 CG15354 CG15355 CG17188 CG17703 CG18533 CG30123 CG30124 CG31646-RA CG31708-RA CG31970 CG33295 CG34019 CG40378 CG40378-RB CG42644 CG43676 CG4814 CG5031 CG9508 CG9511 CT15465 CT16138 CT18665 CT32337 CT32338 CT33566 CT33567 CT34248 CT34319 CT35147 CT35293 CT35363 CT35364 CT35785 D-gpcB DEXT1 DIP-alpha DIP-beta DIP-delta DIP-epsilon DIP-eta DIP-gamma DIP-kappa DIP-lambda DIP-theta DIP-zeta DLP Dally-like Dlp Dly DmHs6st Dmel\CG14010 Dmel\CG14521 Dmel\CG15312 Dmel\CG15630 Dmel\CG31646 Dmel\CG31708 Dmel\CG31814 Dmel\CG32146 Dmel\CG32791 Dmel\CG33147 Dmel\CG33543 Dmel\CG34391 Dmel\CG42343 Dmel\CG42368 Dmel\CG4451 Dmel\CG45781 Dmel\CG7890 Dmel\CG8403 Ext2 Fipi HS3ST HS6ST Hs2st Hs3st-A Hs3st-B Hs6st Lac SP2353 Sdc Syd UST74C anon-WO0140519.196 dHS3OSTA dHS3OSTB dHS6ST dHs3st-B dally dlp dly fipi frc hs6st lincRNA.S3111 pp-CT34319 pp-CT34320 pp-CT34321 sfl sotv ttv	Drosophila melanogaster (fruit fly)
HS-GAG degradation	Alpha-L-iduronidase Beta galactosidase, isoform A Beta-galactosidase Beta-glucuronidase Dally-like, isoform A Division abnormally delayed protein Dpr-interacting protein alpha, isoform A Dpr-interacting protein beta, isoform C Dpr-interacting protein delta, isoform D Dpr-interacting protein epsilon Dpr-interacting protein eta, isoform B Dpr-interacting protein gamma Dpr-interacting protein kappa, isoform A Dpr-interacting protein lambda Dpr-interacting protein theta Dpr-interacting protein zeta, isoform A Factor of interpulse interval Heparanase Iduronate 2-sulfatase LP03571p Lachesin N-sulfoglucosamine sulfohydrolase Neural cell adhesion molecule 2 SP2353, isoform A Syndecan Uncharacterized protein, isoform D	A1ZA87 A1ZBG9 A4IJ70 A8JNC7 B7Z153 M9NDT2 P49415 Q24114 Q24372 Q59E14 Q7PLL7 Q8IP70 Q9VAR6 Q9VE24 Q9VE79 Q9VGE7 Q9VKJ8 Q9VLF0 Q9VLL5 Q9VMJ5 Q9VMN6 Q9VMN9 Q9VR25 Q9VUG1 Q9VZP8 Q9W4R3	14010 14521 15630 172F5T 31646 31708 31814 32791 33543 34391 40378 42343 42368 87A7-9/8 BG:DS08249.1 BP1062 BcDNA:GH12319 BcDNA:RE23430 CG12564 CG12565 CG13019 CG13020 CG13103 CG13104 CG13105 CG13981 CG14008 CG14009 CG14583 CG15117-RB CG15214 CG15354 CG15355 CG17703 CG31646-RA CG31708-RA CG31970 CG33295 CG34019 CG40378 CG40378-RB CG42644 CG43676 CG4814 CG5031 CG9508 CG9511 CT15465 CT16138 CT18665 CT32337 CT32338 CT33566 CT33567 CT34248 CT34319 CT35147 CT35293 CT35363 CT35364 CT35785 D-gpcB DIP-alpha DIP-beta DIP-delta DIP-epsilon DIP-eta DIP-gamma DIP-kappa DIP-lambda DIP-theta DIP-zeta DLP Dally-like Dlp Dly DmelGal Dmel\CG12014 Dmel\CG13397 Dmel\CG14010 Dmel\CG14291 Dmel\CG14309 Dmel\CG14521 Dmel\CG15117 Dmel\CG15312 Dmel\CG15630 Dmel\CG3132 Dmel\CG31646 Dmel\CG31708 Dmel\CG31814 Dmel\CG32146 Dmel\CG32791 Dmel\CG33543 Dmel\CG34391 Dmel\CG42343 Dmel\CG42368 Dmel\CG45781 Dmel\CG8403 Dmel\CG9092 ESTS:172F5T Ect3 Fipi Gal IDS Ids Idua Lac Naglu SGSH SP2353 Sdc Sgsh Syd anon-87Ag anon-EST:Posey282 anon-WO0140519.196 anon-sts19 beta-GAL beta-Gal-1 beta-gal dally dbeta-Gal dlp dly fipi gal lacZ-1 pp-CT34319 pp-CT34320 pp-CT34321	Drosophila melanogaster (fruit fly)	G01550VL G09546QO
CDC42 GTPase cycle	Cdc42 homolog Chondrocyte-derived ezrin-like domain containing protein, isoform G Crossveinless c, isoform C Dynamin associated protein 160, isoform D Ephexin, isoform D FI04035p FI17866p1 FI24033p1 GTPase-activating protein CdGAPr Guanine nucleotide-binding protein subunit alpha homolog LD16419p LD20667p LD43457p Pebble, isoform B Pi3K21B, isoform B Protein still life, isoform SIF type 1 Protein vav RalA-binding protein 1 Rho GTPase activating protein at 15B, isoform C Rho GTPase activating protein at 16F, isoform E Rho GTPase activating protein at 19D, isoform D Rho GTPase activating protein at 1A, isoform E Rho GTPase activating protein at 5A, isoform A Rho GTPase activating protein at 71E, isoform D Rho GTPase-activating protein 100F Rho GTPase-activating protein 190 Rho GTPase-activating protein 68F Rho GTPase-activating protein 92B Rho GTPase-activating protein Graf Rho GTPase-activating protein conundrum Rho guanine nucleotide exchange factor 2, isoform D Rho guanine nucleotide exchange factor 3, isoform L Rho-type guanine nucleotide exchange factor, isoform F Trio, isoform A Uncharacterized protein, isoform A Uncharacterized protein, isoform A Uncharacterized protein, isoform B Uncharacterized protein, isoform C Zizimin, isoform K	A1Z9I5 A1ZAN6 A1ZAQ3 A1ZAQ4 A1ZBA1 A8DZ19 A8JQT5 A8JR05 B7Z058 M9ND00 M9PCG3 M9PHU0 P25157 P40793 P91621 Q0E938 Q7K4E0 Q7KTZ2 Q7KVD1 Q8IQ97 Q8T0G4 Q9NHV9 Q9V9S7 Q9VDE9 Q9VDG2 Q9VDS5 Q9VIS1 Q9VPI9 Q9VTU3 Q9VVC6 Q9VW59 Q9VX32 Q9VX92 Q9W0S2 Q9W4A9 X2JC00 X2JCF3 X2JDY8 X2JEI9	0083/20 0293/09 0368/10 0542/03 0959/14 13345 1372/03 1386/06 1412 38C.40 ARHGEF7 AcGAP BCR BEST:LD36950 BcDNA:AT26639 BcDNA:GH03693 BcDNA:GH05095 BcDNA:LD07615 BcDNA:RH50880 BcDNA:RH71439 C- GAP C-GAP CDEP CG10412 CG10416 CG12183 CG1225 CG12432 CG1283 CG13881 CG13882 CG13883 CG14060 CG14845 CG14846 CG14847 CG14848 CG14849 CG15612 CG15613 CG15819 CG16980 CG17617 CG17960 CG18430 CG2008 CG30115-RE CG31319 CG31330 CG31536 CG34306 CG3799 CG40453 CG42377 CG42378 CG5503 CG6630 CG7396 CG8480 CG8557 CG9208 CTR CdGAPr Cdc42 Cdep CrGAP Cv-c DAP-160 DAP160 DRacGAP DRhoGEF DRhoGEF2 DTrio Dap160 Dap160/intersectin Dm zir Dm ziz Dmel\CG10043 Dmel\CG1099 Dmel\CG11376 Dmel\CG13345 Dmel\CG1412 Dmel\CG15611 Dmel\CG18214 Dmel\CG2699 Dmel\CG30115 Dmel\CG30440 Dmel\CG30456 Dmel\CG3208 Dmel\CG32149 Dmel\CG3421 Dmel\CG34389 Dmel\CG40494 Dmel\CG42533 Dmel\CG42665 Dmel\CG43658 Dmel\CG43976 Dmel\CG44193 Dmel\CG4937 Dmel\CG6424 Dmel\CG7122 Dmel\CG7823 Dmel\CG8114 Dmel\CG9635 Dp60 DrhoGEF DrhoGEF2 DrhoGEF3 DrtGEF ECT2 EG:23E12.2 EG:23E12.5 Ect-2 Exn Exn-RD FBgn 31216 GEF GEFmeso GH05095 Gef2 Graf M89 P60 PBL PI(3)K PI3 kinase PI3K PI3K-p60 PI3K-reg PI3K21B PI[[3]]K Pbl Pbl/Ect2 Peb Pi3K Pi3K21B Pi3Kp60 Pi3k21B Pix RG2 RacGAP RacGAP50C RacGAP50c RacGap RacGap50C Rho-GEF2 Rho/RacGEF RhoGAP RhoGAP-50C14 RhoGAP-71E1 RhoGAP100F RhoGAP15B RhoGAP16F RhoGAP19D RhoGAP1A RhoGAP5A RhoGAP68F RhoGAP71E RhoGAP88C RhoGAP92B RhoGAP93B RhoGAP93B-RA RhoGAPp190 RhoGDI RhoGEF RhoGEF2 RhoGEF3 RhoGF2 RhoGap71E RhoGef2 Rlip RoGAP71E RtGEF Su(Rho1)2B Syd-1 T2 TRIO TUM Trio Tum Tumbleweed UNC-73/Trio Vav Vilse Zir Ziz acGAP anon-EST:Posey54 anon-WO0118547.96 anon-WO0153538.32 anon-WO0153538.33 anon-WO0153538.34 anon-WO0172774.22 anon-WO0172774.25 beta-PIX betaPIX cdep conu cta cv-c dP60 dPI3K dPIX dPix dRhoGEF dRhoGEF2 dTrio dap160 deltap60 dp60 dpix droPIK57 eon exn gap20 i23 i249 l(2)04291 l(3)036810 l(3)06951 l(3)09645 l(3)6D104 l(3)S036810 l(3)S095914 l(3)S137203 l(3)S138606 l(3)S[1372/3] l(3)S[1386/06] l(3)j6B9 l(3)trio noncoding_4110 p160 p60 p85 pbl pix racGAP50 racGAP50C racGAP50c rhoGAP1A rhoGAP88C rhoGEF rhoGEF2 rhoGEF3 rhogap71e rhogef2 rtGEF shar sif trio tum tum-RA vilse	Drosophila melanogaster (fruit fly)
Gap-filling DNA repair synthesis and ligation in TC-NER	CDK-activating kinase assembly factor MAT1 Cullin 4, isoform A Cyclin-H Cyclin-dependent kinase 7 DNA damage-binding protein 1 DNA ligase 1 DNA ligase DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerase II subunit Rpb4 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC5 FI04011p GEO08380p1 GEO11084p1 GH07456p GH17761p General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription and DNA repair factor IIH subunit TFB5 General transcription factor IIH subunit 1 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit LD35209p Polyubiquitin Pre-mRNA-processing factor 19 Pre-mRNA-splicing factor syf1 homolog RE31520p RING-box protein 1A RPB5 homolog Replication factor A protein 2 Replication factor C 38kD subunit, isoform A Replication factor C subunit 1 Replication factor C subunit 2 Replication factor C subunit 3 Replication protein A 70 kDa DNA-binding subunit Transcription elongation factor S-II Ubiquitin carboxyl-terminal hydrolase 7 Ubiquitin-like domain-containing protein Ubiquitin-ribosomal protein eS31 fusion protein Uncharacterized protein, isoform D Zinc finger protein 830	A1Z9G2 B7Z018 O76513 O97183 P04052 P08266 P0CG69 P15357 P20232 P35600 P36958 P53034 Q02870 Q24216 Q24320 Q24492 Q5BI50 Q6IGE3 Q7JZF5 Q7KLW9 Q7KPG8 Q7KSN8 Q7KVP9 Q960E8 Q9U9Q1 Q9VBY5 Q9VC49 Q9VEA5 Q9VFB5 Q9VG84 Q9VHV6 Q9VIH1 Q9VJE4 Q9VKW3 Q9VNP8 Q9VNZ3 Q9VPX4 Q9VUR1 Q9VX15 Q9VYQ8 Q9VYW3 Q9W1H4 Q9W418 Q9W5E1 Q9XYZ5 Q9Y095 R9PY16	142767_at 152117_at 153194_at 154538_at 4208 AT-1 BG:DS00941.10 BcDNA.LD02793 BcDNA:LD02793 BcDNA:LD06837 BcDNA:RH55360 CCNH CD 7 CDK7 CG14037 CG14729 CG14730 CG18282 CG6572 CR11700 CR32744 CT36969 CUL4 Cdk7 Cul-4 Cul4 Cullin4 CycH D-SSB D-rpII33 DDB1 DMcul-4 DNA-ligI DNA-ligII DNAlig1 DNAlig3 DRFC DRP-A DhR3 DhXPD DmCDK7 DmCdk7 DmMO15 DmMo15 DmRFC2 DmRFC3 DmRFC5 DmRP-A DmRPA DmRPB5 DmSII DmUb DmUbi-p5E DmXPD Dmcdk7 Dmel\CG11115 Dmel\CG11246 Dmel\CG11700 Dmel\CG11839 Dmel\CG11979 Dmel\CG15220 Dmel\CG17227 Dmel\CG31155 Dmel\CG31368 Dmel\CG32744 Dmel\CG3319 Dmel\CG34186 Dmel\CG4208 Dmel\CG42373 Dmel\CG5041 Dmel\CG5313 Dmel\CG5519 Dmel\CG6258 Dmel\CG7405 Dmel\CG7614 Dmel\CG7764 Dmel\CG7885 Dmel\CG8142 Dmel\CG8711 Dmel\CG9273 Dmel\CG9433 Dmel\CG9667 Dmp34 Dmp52 Dmp8 EC2-11 ERCC2 ERCC3 ESTS:143G11T ESTS:199A6T GPB Gbp Gnf1 ISY1 LIG3 Lig3 MAT1 Mat1 Mo15 PRP19 Pol II Pol II RPII33 PolII PolIIo Polr2A Polr2B Polr2C Polr2D Polr2E Polr2F Polr2G Polr2H Polr2I Polr2J Polr2K Polr2L Prp19 RFC2 RNA Pol II RNA pol II RNA polII RNAP RP-A RP140 RPA RPA 30 kDa RPA1 RPA2 RPA3 RPA30 RPB1 RPB12 RPB2 RPB3 RPB5 RPB6 RPB7 RPB8 Rbp3 RfC RfC3 RfC38 RfC4 RfC40 Rfc3 Rfc37 Rfc38 Roc1a RpA-30 RpA2 RpABC14 RpII140 RpII15 RpII18 RpII215 RpII33 RpS27A Rpb10 Rpb11 Rpb12 Rpb3 Rpb4 Rpb5 Rpb7 Rpb8 Rpll33 SSL1 Ssb-30 Ssl1 TFB2 TFB4 TFB5 TFB5 (uORF) TTDA TfIIS Tfb1 Tfb2 Tfb4 Tfb5 Tfb5-RB UB UB3-D UBI-F80 Ub Ubi Ubi-m Ubi-p5E Ubi-p5E5 Ubi-p63E Ubiq Ubiquitin Usp7 XPD XPD/ERCC2 XRCC1 XRCC1-RA Xpd Xrcc1 Znf830 anon-WO0118547.648 anon-sts41 br17 cdk-7 cdk7 cul-4 cul-4-RA cul4 dCdk7 dCul4 dPrp19 dRP-A dRPA2 dRpb7 fand fas hay l(1)G0241 l(2)07838 l(2)34Dg l(2)SH1279 l(2)SH2 1279 l(2)SH2 2137 l(2)SH2137 l(2)br17 l(2)k05605 l(2)k13807 l(2)rfc38 l(3)E35 l34Dg lig 3 lig3 lig3-RA lincRNA.843 mrn ms(3)nc16 n(2)k13807 nc16 p34 p40[MO15] p44 p52 p8 pic pol II polII poly-ub prp19 rfc3 rfc38 rpII33 rpb3 ssl1 uORF xpd	Drosophila melanogaster (fruit fly)
Formation of TC-NER Pre-Incision Complex	CDK-activating kinase assembly factor MAT1 COP9 signalosome complex subunit 1b COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 3 COP9 signalosome complex subunit 4 COP9 signalosome complex subunit 5 COP9 signalosome complex subunit 6 COP9 signalosome complex subunit 7 COP9 signalosome complex subunit 8 Cullin 4, isoform A Cyclin-H Cyclin-dependent kinase 7 DNA damage-binding protein 1 DNA repair protein complementing XP-A cells homolog DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerase II subunit Rpb4 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC5 GEO11084p1 GH07456p GH17761p General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription and DNA repair factor IIH subunit TFB5 General transcription factor IIH subunit 1 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit Polyubiquitin Pre-mRNA-processing factor 19 Pre-mRNA-splicing factor syf1 homolog RE31520p RING-box protein 1A RPB5 homolog Transcription elongation factor S-II Ubiquitin carboxyl-terminal hydrolase 7 Ubiquitin-like domain-containing protein Ubiquitin-ribosomal protein eS31 fusion protein Uncharacterized protein, isoform D Zinc finger protein 830	A1Z9G2 B7Z018 O76513 O97183 P04052 P08266 P0CG69 P15357 P20232 P28518 P36958 Q02870 Q24216 Q24320 Q5BI50 Q6IGE3 Q7JZF5 Q7KLW9 Q7KPG8 Q7KSN8 Q7KTH8 Q7KVP9 Q8SYG2 Q94899 Q960E8 Q9V345 Q9V4S8 Q9VBY5 Q9VC49 Q9VCY3 Q9VEA5 Q9VFB5 Q9VHV6 Q9VJE4 Q9VNP8 Q9VNZ3 Q9VPX4 Q9VUR1 Q9VVU5 Q9VYQ8 Q9W418 Q9W5E1 Q9XYZ5 Q9XZ58 R9PY16	142767_at 152117_at 154538_at AT-1 BG:DS00941.10 BcDNA.LD02793 BcDNA:LD02793 CCNH CD 7 CDK7 CG14037 CG14729 CG14730 CG18282 CG6572 CR11700 CR32744 CSN1b CSN2 CSN3 CSN4 CSN5 CSN6 CSN7 CSN8 CT36969 CUL4 Cdk7 Cul-4 Cul4 Cullin4 CycH D-rpII33 DDB1 DMcul-4 DhR3 DhXPD DmCDK7 DmCdk7 DmMO15 DmMo15 DmRPB5 DmSII DmUb DmUbi-p5E DmXPD Dmcdk7 Dmel\CG11115 Dmel\CG11246 Dmel\CG11700 Dmel\CG11839 Dmel\CG11979 Dmel\CG31155 Dmel\CG31368 Dmel\CG32744 Dmel\CG3319 Dmel\CG34186 Dmel\CG42373 Dmel\CG5041 Dmel\CG5519 Dmel\CG7405 Dmel\CG7614 Dmel\CG7764 Dmel\CG7885 Dmel\CG8711 Dmel\CG9433 Dmel\CG9667 Dmp34 Dmp52 Dmp8 EC2-11 ERCC2 ERCC3 ESTS:143G11T ESTS:199A6T GPB Gbp ISY1 MAT1 Mat1 Mo15 PRP19 Pol II Pol II RPII33 PolII PolIIo Polr2A Polr2B Polr2C Polr2D Polr2E Polr2F Polr2G Polr2H Polr2I Polr2J Polr2K Polr2L Prp19 RNA Pol II RNA pol II RNA polII RNAP RP140 RPB1 RPB12 RPB2 RPB3 RPB5 RPB6 RPB7 RPB8 Rbp3 Roc1a RpABC14 RpII140 RpII15 RpII18 RpII215 RpII33 RpS27A Rpb10 Rpb11 Rpb12 Rpb3 Rpb4 Rpb5 Rpb7 Rpb8 Rpll33 SSL1 Ssl1 TFB2 TFB4 TFB5 TFB5 (uORF) TTDA TfIIS Tfb1 Tfb2 Tfb4 Tfb5 Tfb5-RB UB UB3-D UBI-F80 Ub Ubi Ubi-m Ubi-p5E Ubi-p5E5 Ubi-p63E Ubiq Ubiquitin Usp7 XPD XPD/ERCC2 Xpa Xpac Xpd Znf830 alien anon-WO0118547.648 anon-sts41 br17 cdk-7 cdk7 cul-4 cul-4-RA cul4 dCdk7 dCul4 dPrp19 dRpb7 fand fas hay l(2)07838 l(2)34Dg l(2)SH1279 l(2)SH2 1279 l(2)SH2 2137 l(2)SH2137 l(2)br17 l(2)k05605 l(3)E35 l34Dg lincRNA.843 mrn ms(3)nc16 nc16 p34 p40[MO15] p44 p52 p8 pic pol II polII poly-ub prp19 quo rpII33 rpb3 ssl1 uORF xpd	Drosophila melanogaster (fruit fly)
Dual incision in TC-NER	CDK-activating kinase assembly factor MAT1 Cullin 4, isoform A Cyclin-H Cyclin-dependent kinase 7 DNA damage-binding protein 1 DNA polymerase epsilon catalytic subunit 1 DNA polymerase epsilon subunit 2 DNA polymerase epsilon subunit 3 DNA polymerase epsilon subunit 4 DNA repair endonuclease XPF DNA repair protein complementing XP-A cells homolog DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerase II subunit Rpb4 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC5 Ercc1 GEO08380p1 GEO11084p1 GH07456p GH17761p General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription and DNA repair factor IIH subunit TFB5 General transcription factor IIH subunit 1 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit LD35209p Polyubiquitin Pre-mRNA-processing factor 19 Pre-mRNA-splicing factor syf1 homolog Proliferating cell nuclear antigen RE31520p RING-box protein 1A RPB5 homolog Replication factor A protein 2 Replication factor C 38kD subunit, isoform A Replication factor C subunit 1 Replication factor C subunit 2 Replication factor C subunit 3 Replication protein A 70 kDa DNA-binding subunit Transcription elongation factor S-II Ubiquitin carboxyl-terminal hydrolase 7 Ubiquitin-like domain-containing protein Ubiquitin-ribosomal protein eS31 fusion protein Uncharacterized protein, isoform D Zinc finger protein 830	A1Z9G2 B7Z018 O76513 O97183 P04052 P08266 P0CG69 P15357 P17917 P20232 P28518 P35600 P36958 P53034 Q02870 Q24087 Q24216 Q24320 Q24492 Q5BI50 Q6IGE3 Q7JZF5 Q7KLW9 Q7KMG7 Q7KPG8 Q7KSN8 Q7KVP9 Q960E8 Q9U9Q1 Q9V444 Q9VBY5 Q9VC49 Q9VCN1 Q9VEA5 Q9VFB5 Q9VHV6 Q9VIH1 Q9VJE4 Q9VKW3 Q9VNP8 Q9VNZ3 Q9VPX4 Q9VRQ7 Q9VUR1 Q9VX15 Q9VYQ8 Q9VYW3 Q9W256 Q9W418 Q9W5E1 Q9XYZ5 R9PY16	142767_at 152117_at 153194_at 154538_at AT-1 BG:DS00941.10 BcDNA.LD02793 BcDNA:LD02793 BcDNA:LD06837 BcDNA:RH55360 CCNH CD 7 CDK7 CG14037 CG14729 CG14730 CG18282 CG6572 CHRAC CHRAC14 CR11700 CR32744 CT36969 CUL4 Cdk7 Chrac-14 Cul-4 Cul4 Cullin4 CycH D-SSB D-rpII33 DDB1 DMcul-4 DNApol-epsilon DNApol-epsilon255 DNApol-epsilon58 DNApolE2 DNApolE3 DNApolE4 DRFC DRP-A DhR3 DhXPD DmCDK7 DmCdk7 DmMO15 DmMo15 DmRFC2 DmRFC3 DmRFC5 DmRP-A DmRPA DmRPB5 DmSII DmUb DmUbi-p5E DmXPD Dmcdk7 Dmel\CG10215 Dmel\CG11115 Dmel\CG11246 Dmel\CG11700 Dmel\CG11839 Dmel\CG11979 Dmel\CG15220 Dmel\CG31155 Dmel\CG31368 Dmel\CG32744 Dmel\CG3319 Dmel\CG34186 Dmel\CG42373 Dmel\CG5041 Dmel\CG5313 Dmel\CG5519 Dmel\CG6258 Dmel\CG7405 Dmel\CG7614 Dmel\CG7764 Dmel\CG7885 Dmel\CG8142 Dmel\CG8711 Dmel\CG9273 Dmel\CG9433 Dmel\CG9667 Dmp34 Dmp52 Dmp8 EC2-11 ERCC1 ERCC2 ERCC3 ESTS:143G11T ESTS:199A6T Ercc1 GPB Gbp Gnf1 ISY1 MAT1 Mat1 Mes4 Mo15 NF-Yc PCNA PCNA1 PRP19 Pol II Pol II RPII33 PolE1 PolE2 PolE4 PolII PolIIo Polepsilon Polr2A Polr2B Polr2C Polr2D Polr2E Polr2F Polr2G Polr2H Polr2I Polr2J Polr2K Polr2L Prp19 RFC2 RNA Pol II RNA pol II RNA polII RNAP RP-A RP140 RPA RPA 30 kDa RPA1 RPA2 RPA3 RPA30 RPB1 RPB12 RPB2 RPB3 RPB5 RPB6 RPB7 RPB8 Rbp3 RfC RfC3 RfC38 RfC4 RfC40 Rfc3 Rfc37 Rfc38 Roc1a RpA-30 RpA2 RpABC14 RpII140 RpII15 RpII18 RpII215 RpII33 RpS27A Rpb10 Rpb11 Rpb12 Rpb3 Rpb4 Rpb5 Rpb7 Rpb8 Rpll33 SSL1 Ssb-30 Ssl1 TFB2 TFB4 TFB5 TFB5 (uORF) TTDA TfIIS Tfb1 Tfb2 Tfb4 Tfb5 Tfb5-RB UB UB3-D UBI-F80 Ub Ubi Ubi-m Ubi-p5E Ubi-p5E5 Ubi-p63E Ubiq Ubiquitin Usp7 XPD XPD/ERCC2 Xpa Xpac Xpd Znf830 anon-WO0118547.648 anon-sts41 br17 cdk-7 cdk7 cul-4 cul-4-RA cul4 dCdk7 dCul4 dPrp19 dRP-A dRPA2 dRpb7 ercc1 fand fas hay l(1)G0241 l(2)07838 l(2)34Dg l(2)SH1279 l(2)SH2 1279 l(2)SH2 2137 l(2)SH2137 l(2)br17 l(2)k05605 l(2)k13807 l(2)rfc38 l(3)E35 l(3)pl10 l(3)pl10R l34Dg lincRNA.843 mary mei-9 mrn ms(3)nc16 mus209 n(2)k13807 nc16 p34 p40[MO15] p44 p52 p8 pic pol II polII poly-ub prp19 rfc3 rfc38 rpII33 rpb3 ssl1 uORF xpd	Drosophila melanogaster (fruit fly)
Regulation of pyruvate metabolism	AT14039p E3 ubiquitin-protein transferase MAEA FI21269p1 GH10162p GH17761p L-lactate dehydrogenase LD25271p Malic enzyme Polyubiquitin Pyruvate kinase Pyruvate kinase Pyruvate kinase Ran-binding proteins 9/10 homolog Serine/threonine-protein phosphatase Pgam5, mitochondrial Ubiquitin-like domain-containing protein Ubiquitin-ribosomal protein eS31 fusion protein Uncharacterized protein, isoform A Uncharacterized protein WD repeat-containing protein 26 homolog pyruvate kinase	A1Z9F8 E1JIZ4 O46084 O62619 P0CG69 P15357 Q0E9A5 Q4Z8K6 Q7K0L4 Q8MSB1 Q95028 Q9VD23 Q9VFG4 Q9VNZ9 Q9VQH0 Q9VVH0 Q9VWS1 Q9W2N5 Q9W418 R9PY16	CG13638 CG18282 CG7611 CR11700 CR32744 DmMK DmUb DmUbi-p5E Dmel\CG11249 Dmel\CG11700 Dmel\CG12229 Dmel\CG13334 Dmel\CG2964 Dmel\CG31357 Dmel\CG32744 Dmel\CG3295 Dmel\CG5889 Dmel\CG6617 Dmel\CG7069 Dmel\CG7362 Dmel\CG8811 ESTS:143G11T ESTS:199A6T Hou Imp-L3 ImpL3 Kaz Ldh MDH Mdh Men-b NEST:bs27e02 Pgam5 PyK RanBPM RpS27A Sou UB UB3-D UBI-F80 Ub Ubi Ubi-m Ubi-p5E Ubi-p5E5 Ubi-p63E Ubiq Ubiquitin anon-EST:Posey180 anon-EST:Posey79 anon-sts41 muskelin muskelin-RB poly-ub	Drosophila melanogaster (fruit fly)
G0 and Early G1	Chromatin assembly factor 1 p55 subunit Cyclin-dependent kinase 2 G1/S-specific cyclin-E G2/mitotic-specific cyclin-A Histone deacetylase HDAC1 LD06557p LD07342p Lin-52, isoform A Protein lin-54 homolog RE32990p Retinoblastoma family protein Serine/threonine-protein kinase minibrain Transcription factor Dp Transcription factor E2F2	A1Z9E2 O77051 P14785 P23573 P49657 P54733 Q24318 Q24472 Q24572 Q7K159 Q94517 Q9VF04 Q9W482 Q9W542	86E4.4 Caf1 Caf1-55 Cdk2 CycA CycE Dmel\CG15119 Dmel\CG15929 Dmel\CG3480 Dmel\CG5083 Dp E2f2 EG:86E4.4 HDAC1 Lin-52 Lin52 Mip130 Mip130/TWIT Mip130/Twt Mip40 RB RBF2 RBf2 Rbf Rbf2 Rpd3 TWIT Twit cdc2c dLIN-52 dLin-52 dLin52 dlin-52 dlin52 lin-52 mip120 mip130 mip40 mnb p40 rbf2 twit	Drosophila melanogaster (fruit fly)

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