GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **226 - 250** of **263** in total

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Pathway Name	Protein Name ▲	UniProt ID	Gene Symbol	Organism	GlyTouCan ID
Activated NTRK3 signals through PI3K	NT-3 growth factor receptor Neurotrophin-3 Proto-oncogene tyrosine-protein kinase Src	A0A3Q2U804 P00523 Q91044	NTF3 NTRK3 SRC TRKC	Gallus gallus (chicken)
Activated NTRK3 signals through PLCG1	NT-3 growth factor receptor Neurotrophin-3	A0A3Q2U804 Q91044	NTF3 NTRK3 TRKC	Gallus gallus (chicken)
NTF3 activates NTRK3 signaling	NT-3 growth factor receptor Neurotrophin-3	A0A3Q2U804 Q91044	NTF3 NTRK3 TRKC	Gallus gallus (chicken)
Receptor-type tyrosine-protein phosphatases	NT-3 growth factor receptor SLIT and NTRK like family member 1 SLIT and NTRK like family member 2	F1NEZ4 F1NZH0 Q91044	LOC121106448 NTRK3 SLITRK1 TRKC	Gallus gallus (chicken)
Ion influx/efflux at host-pathogen interface	Natural resistance-associated macrophage protein 1 PDZ domain-containing protein 11	P51027 Q5ZIK2	NRAMP1 PDZD11 PDZK11 SLC11A1	Gallus gallus (chicken)
Metal ion SLC transporters	Natural resistance-associated macrophage protein 1 Solute carrier family 40 member Solute carrier family 41 member Solute carrier family 41 member	E1C334 F1NWZ7 P51027 Q5F3K3	NRAMP1 SLC11A1 SLC40A1 SLC41A1 SLC41A2	Gallus gallus (chicken)
Highly calcium permeable postsynaptic nicotinic acetylcholine receptors	Neuronal acetylcholine receptor subunit alpha-3 Neuronal acetylcholine receptor subunit alpha-4 Neuronal acetylcholine receptor subunit alpha-9 Neuronal acetylcholine receptor subunit beta-4	F1P4U2 P09481 P09482 Q9PTS8	CHRNA3 CHRNA4 CHRNA9 CHRNB4	Gallus gallus (chicken)
Highly sodium permeable postsynaptic acetylcholine nicotinic receptors	Neuronal acetylcholine receptor subunit alpha-3 Neuronal acetylcholine receptor subunit alpha-4 Neuronal acetylcholine receptor subunit beta-4	F1P4U2 P09481 P09482	CHRNA3 CHRNA4 CHRNB4	Gallus gallus (chicken)
Highly calcium permeable nicotinic acetylcholine receptors	Neuronal acetylcholine receptor subunit alpha-3 Neuronal acetylcholine receptor subunit alpha-4 Neuronal acetylcholine receptor subunit beta-4	F1P4U2 P09481 P09482	CHRNA3 CHRNA4 CHRNB4	Gallus gallus (chicken)
NF-kB is activated and signals survival	Nuclear factor NF-kappa-B p105 subunit Polyubiquitin-B Sequestosome 1 TNF receptor-associated factor Tumor necrosis factor receptor superfamily member 16 Ubiquitin B Ubiquitin-ribosomal protein eS31 fusion protein	A0A1D5P546 A0A1D5PLN4 E1C626 P0CG62 P18519 P79781 Q04861	NFKB1 NGFR RPS27A SQSTM1 TNFRSF16 TRAF6 UBA80 UBB	Gallus gallus (chicken)
Regulated proteolysis of p75NTR	Nuclear factor NF-kappa-B p105 subunit Presenilin-1 Presenilin TNF receptor-associated factor Tumor necrosis factor alpha converting enzyme Tumor necrosis factor receptor superfamily member 16	E1C626 F1NGP7 P18519 Q04861 Q4JIM4 Q5QHR9	ADAM17 NFKB1 NGFR PSEN1 PSEN2 TNFRSF16 TRAF6	Gallus gallus (chicken)
Opsins	Opsin 3 Opsin 5 Retinal G protein coupled receptor Retinal pigment epithelium-derived rhodopsin homolog Rhodopsin	E1C1F4 F1NEL9 F1NEY2 F1P193 F1P3Y2	OPN3 OPN5 RGR RHO RRH cOpn3m	Gallus gallus (chicken)
The NLRP3 inflammasome	Pannexin SGT1 homolog, MIS12 kinetochore complex assembly cochaperone Thioredoxin	A0A1D5P0I0 F1NAS0 P08629	PANX PANX1 SUGT1 TXN	Gallus gallus (chicken)
IRS-mediated signalling	Phosphatidylinositol 3-kinase regulatory subunit alpha Phosphoinositide-3-kinase regulatory subunit 2 phosphatidylinositol-4,5-bisphosphate 3-kinase	A0A3Q3ACS4 E1C2C5 Q5F4A2	PIK3CB PIK3R1 PIK3R2	Gallus gallus (chicken)
Glycogen breakdown (glycogenolysis)	Phosphoglucomutase-1 glycogenin glucosyltransferase	A0A1D5PAA8 F1NN63	GYG1 PGM1	Gallus gallus (chicken)	G58161NS
Galactose catabolism	Phosphoglucomutase-1	F1NN63	PGM1	Gallus gallus (chicken)	G93924TT
NRIF signals cell death from the nucleus	Polyubiquitin-B Presenilin-1 Presenilin Sequestosome 1 TNF receptor-associated factor Tumor necrosis factor receptor superfamily member 16 Ubiquitin B Ubiquitin-ribosomal protein eS31 fusion protein	A0A1D5P546 A0A1D5PLN4 E1C626 F1NGP7 P0CG62 P18519 P79781 Q4JIM4	NGFR PSEN1 PSEN2 RPS27A SQSTM1 TNFRSF16 TRAF6 UBA80 UBB	Gallus gallus (chicken)
Voltage gated Potassium channels	Potassium voltage-gated channel modifier subfamily F member 1 Potassium voltage-gated channel modifier subfamily G member 1 Potassium voltage-gated channel modifier subfamily G member 4 Potassium voltage-gated channel modifier subfamily S member 2 Potassium voltage-gated channel modifier subfamily S member 3 Potassium voltage-gated channel subfamily A member 10 Potassium voltage-gated channel subfamily A member 2 Potassium voltage-gated channel subfamily A member 3 Potassium voltage-gated channel subfamily A member 4 Potassium voltage-gated channel subfamily B member 1 Potassium voltage-gated channel subfamily B member 2 Potassium voltage-gated channel subfamily C member 4 Potassium voltage-gated channel subfamily D member 2 Potassium voltage-gated channel subfamily D member 3 Potassium voltage-gated channel subfamily G member 2 Potassium voltage-gated channel subfamily H member 1 Potassium voltage-gated channel subfamily H member 8 Potassium voltage-gated channel subfamily Q member 5 Potassium voltage-gated channel subfamily V member 1 Voltage-gated potassium channel subunit beta-1	A0A1D5P1M1 A0A1D5P7T5 A0A1D5PA94 A0A1D5PCF8 A0A1D5PI60 A0A1D5PI98 E1BQU8 E1BS72 E1BWF1 E1BYX3 E1C3M8 E1C3U8 F1NK95 F1NRL8 F1P320 O73606 Q7T199 Q7T1A0 Q9PWR1 Q9YGX8	KCNA10 KCNA2 KCNA3 KCNA4 KCNAB1 KCNB1 KCNB2 KCNC4 KCND2 KCND3 KCNF1 KCNG1 KCNG2 KCNG4 KCNH1 KCNH8 KCNQ5 KCNS2 KCNS3 KCNV1 KVB1.1	Gallus gallus (chicken)
Biosynthesis of DHA-derived SPMs	Prostaglandin G/H synthase 2	P27607	CEF-147 PTGS2	Gallus gallus (chicken)
Biosynthesis of electrophilic ω-3 PUFA oxo-derivatives	Prostaglandin G/H synthase 2	P27607	CEF-147 PTGS2	Gallus gallus (chicken)
Biosynthesis of DPAn-3 SPMs	Prostaglandin G/H synthase 2	P27607	CEF-147 PTGS2	Gallus gallus (chicken)
Biosynthesis of EPA-derived SPMs	Prostaglandin G/H synthase 2	P27607	CEF-147 PTGS2	Gallus gallus (chicken)
WNT ligand biogenesis and trafficking	Protein Wnt-11 Protein Wnt-3a Protein Wnt-4 Protein Wnt-7b Protein Wnt Protein Wnt Protein Wnt Protein Wnt Protein Wnt Protein Wnt Protein Wnt Sorting nexin 3 Transmembrane emp24 domain-containing protein 5 Wntless Wnt ligand secretion mediator	A0A1D5NTF4 A1DYI3 F1P376 P49337 P49339 Q2LMP1 Q3C2H6 Q3L254 Q564K5 Q5ZIA3 Q5ZMT4 Q60GF6 Q9DEB8 Q9YGX6	SNX3 TMED5 WLS WNT-11 WNT-4 WNT10A WNT11 WNT2 WNT3 WNT3A WNT4 WNT5A WNT7A WNT7B Wnt10a Wnt3 Wnt6 Wnt8c	Gallus gallus (chicken)
Response to elevated platelet cytosolic Ca2+	Protein kinase C Protein kinase C	A0A1D5PUY5 R4GHL2	PRKCA PRKCB	Gallus gallus (chicken)
Gamma carboxylation, hypusinylation, hydroxylation, and arylsulfatase activation	Protein-S-isoprenylcysteine O-methyltransferase Protein-tyrosine sulfotransferase Protein-tyrosine sulfotransferase protein-ribulosamine 3-kinase protein-ribulosamine 3-kinase	A0A3Q2UD60 E1BRW8 F1NGS3 Q5ZMU7 R4GG02	FN3K FN3KRP ICMT TPST1 TPST2	Gallus gallus (chicken)

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