GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 26 - 50 of 263 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID ▲
Neurotransmitter release cycle
  • NAAA
Gallus gallus (chicken)
PI3K/AKT Signaling
  • AKT1
  • AREG
  • BCAP
  • BTC
  • CEK1
  • CEK2
  • CEK3
  • EGFR
  • EPGN
  • EREG
  • FGF-18
  • FGF-3
  • FGF1
  • FGF10
  • FGF18
  • FGF19
  • FGF2
  • FGF23
  • FGF3
  • FGF4
  • FGF6
  • FGF7
  • FGF8
  • FGFR1
  • FGFR2
  • FGFR3
  • FGFR4
  • FRS2
  • FYN
  • Fgf16
  • Fgf7
  • GRB2
  • HBEGF
  • HEGFL
  • KIT
  • KITLG
  • MAPKAP1
  • MTOR
  • NRG2
  • PDGF-A (L)
  • PDGFA
  • PIK3AP1
  • PIK3CB
  • PIK3CD
  • PIK3R1
  • PIK3R2
  • PTPN11
  • RCJMB04_38b23
  • RCJMB04_6p10
  • RHOG
  • RICTOR
  • SCF
  • SGK
  • SGK1
  • SIN1
  • SRC
  • THEM4
  • TRAT1
  • cRac1A
Gallus gallus (chicken)
ECM proteoglycans
  • CRTL1
  • DCN
  • HAPLN1
  • ITGA9
  • ITGB3
  • MATN3
Gallus gallus (chicken)
Transcriptional regulation by small RNAs
  • AGO1
  • H2A-IX
  • H2AF
  • H2AFX
  • H2AZ2
  • H2B-I
  • H2B-II
  • H2B-III
  • H2B-IV
  • H2B-V
  • H2B-VI
  • H2B-VII
  • H2B-VIII
  • H3-I
  • H3-II
  • H3-III
  • H3-IV
  • H3-IX
  • H3-V
  • H3-VI
  • H3-VII
  • H3-VIII
  • H3-X
  • H4-I
  • H4-II
  • H4-III
  • H4-IV
  • H4-V
  • H4-VI
  • H4-VII
  • HIST1H2B5L
  • LOC100859381
  • LOC426037
  • NUP155
  • NUP37
  • NUP42
  • NUP43
  • NUP50
  • NUP54
  • NUP58
  • POLR2B
  • POLR2C
  • POLR2E
  • POLR2L
  • RAN
  • RPB6
Gallus gallus (chicken)
Regulation of IGF Activity by IGFBP
  • ALB
  • APLP2
  • APOA1
  • BMP4
  • CCN1
  • CDH2
  • CG-1B
  • CST3
  • CYR61
  • DNAJC3
  • FGF23
  • FN1
  • FUCA2
  • HSP90B1
  • IGF1
  • IGF2
  • IGFBP2
  • IGFBP5
  • IL6
  • MATN3
  • MFGE8
  • MGAT4A
  • MXRA8
  • PENK
  • PNPLA2
  • PRSS23
  • QSCN6
  • QSOX
  • QSOX1
  • RCJMB04_11h1
  • RCN1
  • SDC2
  • SERPIND1
  • SOX
  • STC2
Gallus gallus (chicken)
ADP signalling through P2Y purinoceptor 1
  • CPLA2
  • GNA11
  • GNAQ
  • GNB1
  • GNB3
  • GNB4
  • GNG10
  • GNG12
  • GNG13
  • GNG2
  • GNG5
  • GNGT2
  • MAPK14
  • P2RY1
  • PLA2G4
  • PLA2G4A
  • SRC
Gallus gallus (chicken)
Regulation of PLK1 Activity at G2/M Transition
  • ACTR1A
  • BORA
  • CCNB2
  • CDK1
  • CEP41
  • CEP63
  • CEP78
  • CETN1
  • CKAP5
  • CSNK1E
  • CUL1
  • CYCB2
  • DBT
  • DYNC1H1
  • FGFR1OP
  • LIS1
  • LOC420480
  • MBS
  • MYPT1
  • NDE1
  • PAFAH1B1
  • PCM1
  • PLK1
  • PPP1CB
  • PPP1R12A
  • RAB8A
  • RCJMB04_13l14
  • RPS27A
  • SFI1
  • SKP1
  • SKP1A
  • TUBG1
  • UBA80
  • UBB
  • YWHAE
  • YWHAG
Gallus gallus (chicken)
Estrogen-dependent gene expression
  • CBFB
  • DDX5
  • FKBP4
  • FOS
  • FOXA1
  • GATA3
  • GTF2A1
  • GTF2A2
  • H2A-IX
  • H2AF
  • H2AFX
  • H2AZ2
  • H2B-I
  • H2B-II
  • H2B-III
  • H2B-IV
  • H2B-V
  • H2B-VI
  • H2B-VII
  • H2B-VIII
  • H3-I
  • H3-II
  • H3-III
  • H3-IV
  • H3-IX
  • H3-V
  • H3-VI
  • H3-VII
  • H3-VIII
  • H3-X
  • H4-I
  • H4-II
  • H4-III
  • H4-IV
  • H4-V
  • H4-VI
  • H4-VII
  • HDAC1
  • HDAC1A
  • HIST1H2B5L
  • KDM4B
  • LOC100859381
  • LOC426037
  • NCOA1
  • NR5A2
  • NRIP1
  • POLR2B
  • POLR2C
  • POLR2E
  • POLR2L
  • RPB6
  • RUNX1
  • TBP
  • TLE3
  • YY2
Gallus gallus (chicken)
FGFR1b ligand binding and activation
  • CEK1
  • FGF-3
  • FGF1
  • FGF10
  • FGF2
  • FGF3
  • FGFR1
  • TGFBR3
Gallus gallus (chicken)
Adherens junctions interactions
  • ANG
  • CDH12
  • CDH13
  • CDH18
  • CDH2
  • CDH5
  • CDH6
  • CDH7
  • CL2
  • CTNNB1
  • CTNND1
  • JUP
  • NECTIN3
Gallus gallus (chicken)
Disassembly of the destruction complex and recruitment of AXIN to the membrane
  • AXIN1
  • CAV1
  • WNT3A
  • Wnt8c
Gallus gallus (chicken)
Formation of the beta-catenin:TCF transactivating complex
  • BCL9
  • CDC73
  • CTNNB1
  • H2A-IX
  • H2AF
  • H2AFX
  • H2AZ2
  • H2B-I
  • H2B-II
  • H2B-III
  • H2B-IV
  • H2B-V
  • H2B-VI
  • H2B-VII
  • H2B-VIII
  • H3-I
  • H3-II
  • H3-III
  • H3-IV
  • H3-IX
  • H3-V
  • H3-VI
  • H3-VII
  • H3-VIII
  • H3-X
  • H4-I
  • H4-II
  • H4-III
  • H4-IV
  • H4-V
  • H4-VI
  • H4-VII
  • HDAC1
  • HDAC1A
  • HIST1H2B5L
  • LEF1
  • LOC100859381
  • LOC426037
  • PYGO1
  • RBBP5
  • RCJMB04_25e24
  • RUVBL1
  • TCF7
  • TLE1
  • TLE3
Gallus gallus (chicken)
Highly sodium permeable postsynaptic acetylcholine nicotinic receptors
  • CHRNA3
  • CHRNA4
  • CHRNB4
Gallus gallus (chicken)
FRS-mediated FGFR1 signaling
  • CEK1
  • FGF-3
  • FGF1
  • FGF10
  • FGF2
  • FGF23
  • FGF3
  • FGF4
  • FGF6
  • FGF8
  • FGFR1
  • FRS2
  • GRB2
  • HRAS
  • HRAS1
  • KRAS
  • NRAS
  • PTPN11
  • SOS1
Gallus gallus (chicken)
Axonal growth stimulation
  • ARHGDIA
  • NGFR
  • RHOA
  • TNFRSF16
  • cRhoA
  • rhoA
Gallus gallus (chicken)
ROS and RNS production in phagocytes
  • ATP6V0A1
  • ATP6V0A4
  • ATP6V0B
  • ATP6V0C
  • ATP6V0D2
  • ATP6V0E1
  • ATP6V1A
  • ATP6V1B2
  • ATP6V1G3
  • NCF4
  • NOS2
  • NRAMP1
  • RCJMB04_10e23
  • RCJMB04_38b23
  • RCJMB04_9e23
  • SLC11A1
Gallus gallus (chicken)
Transcriptional regulation by the AP-2 (TFAP2) family of transcription factors
  • DEK
Gallus gallus (chicken)
TNFR2 non-canonical NF-kB pathway
  • BAFF
  • CD40L
  • CD40LG
  • TNFRSF1B
  • TNFSF13B
  • TNFSF5
  • TRAF3
Gallus gallus (chicken)
Ion homeostasis
  • ATP1B3
  • ATP2A2
  • ATP2B1
  • ATP2B2
  • CAMK2A
  • COX16
  • ITPR2
  • KCNJ11
  • NCX1
  • PLN
  • PMCA1
  • RCJMB04_3a16
  • SLC8A1
  • SLC8A2
  • STIM1
  • TRPC1
Gallus gallus (chicken)
Arachidonate production from DAG
  • ABHD12
  • ABHD6
Gallus gallus (chicken)
Effects of PIP2 hydrolysis
  • DGKB
  • DGKK
  • ITPR2
  • PRKCD
  • PRKCH
  • TRPC7
Gallus gallus (chicken)
WNT5A-dependent internalization of FZD4
  • FZ4
  • FZD4
  • WNT5A
Gallus gallus (chicken)
Synthesis of PC
  • ABHD3
  • CEPT1
  • CHAT
  • CHKA
  • CHPT1
  • MFSD2A
  • NLS1
  • SLC44A5
Gallus gallus (chicken)
NFG and proNGF binds to p75NTR
  • NGFR
  • TNFRSF16
Gallus gallus (chicken)
Peptide ligand-binding receptors
  • AGTR1
  • APLN
  • APLNR
  • APLNR1
  • BDKRB1
  • BRS3.5
  • CCK1R
  • CCKAR
  • ECE-1
  • EDN2
  • EDNRA
  • F2RL1
  • F2RL2
  • GAL
  • GALR
  • GPER1
  • GPR37L1
  • GRP
  • MC1R
  • MC4R
  • MC5R
  • MLNR
  • Mc1r
  • NMB
  • NMBR
  • NMS
  • NMU
  • NMUR1
  • NMUR2
  • NPBWR1
  • NPSR1
  • NPW
  • NPY
  • NPY1R
  • NPY2R
  • NPY4R
  • NPY5R
  • NTSR1
  • OPRK1
  • OPRL1
  • OPRM1
  • PENK
  • PMCH
  • PNOC
  • PPY
  • PROK2
  • PYY
  • SS1R
  • SS2
  • SS2R
  • SS3R
  • SST
  • SSTR1
  • SSTR2
  • SSTR4
  • SSTR5
  • TRH
  • TRHR
  • UTS2
  • UTS2R
  • XK
Gallus gallus (chicken)

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024