GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 26 - 50 of 263 in total
Pathway Name Protein Name ▲ UniProt ID Gene Symbol Organism GlyTouCan ID
Clathrin-mediated endocytosis
  • ACTR2
  • ACTR3
  • AGFG1
  • AP2A2
  • AP2M1
  • AREG
  • ARP2
  • ARP3
  • ARPC1A
  • ARPC3
  • ARPC5
  • BIN1
  • BTC
  • CLTA
  • CLTB
  • EGFR
  • EPGN
  • EPN2
  • EREG
  • GAPVD1
  • GRB2
  • HBEGF
  • HEGFL
  • HSPA8
  • IL7R
  • M6PR
  • NECAP2
  • PACSIN2
  • PACSIN3
  • PIK3C2A
  • PIP5K1C
  • RAB5A
  • RAB5B
  • RAB5C
  • RCJMB04_1g20
  • RPS27A
  • SCARB2
  • SH3GL2
  • SH3GL3
  • SH3P4
  • SLC2A8
  • SNX18
  • SNX9
  • SYBL1
  • SYT1
  • UBA80
  • UBB
  • VAMP3
  • VAMP7
  • WASL
Gallus gallus (chicken)
Cargo recognition for clathrin-mediated endocytosis
  • AGFG1
  • AP2A2
  • AP2M1
  • AREG
  • BTC
  • CLTA
  • COPS2
  • COPS3
  • COPS7A
  • COPS8
  • CSN3
  • EGFR
  • EPGN
  • EPN2
  • EREG
  • GRB2
  • HBEGF
  • HEGFL
  • IL7R
  • M6PR
  • RCJMB04_15i11
  • RCJMB04_1g20
  • RPS27A
  • SCARB2
  • SH3GL2
  • SH3GL3
  • SH3P4
  • SLC2A8
  • SYBL1
  • SYT1
  • TOR1B
  • UBA80
  • UBB
  • VAMP3
  • VAMP7
Gallus gallus (chicken)
VLDLR internalisation and degradation
  • AP2A2
  • AP2M1
  • CLTA
  • NR1H3
  • RCJMB04_3l2
  • RPS27A
  • UBA80
  • UBB
  • VLDLR
  • VTGR
Gallus gallus (chicken)
Platelet degranulation
  • ABCC4
  • ACTG1
  • ACTN1
  • ACTN2
  • ALB
  • ANX5
  • ANXA5
  • APLP2
  • APOA1
  • CD9
  • CDC37L1
  • CLEC3B
  • F13A1
  • FAM3C
  • FAM49B
  • FN1
  • GTPBP2
  • HABP4
  • IGF1
  • IGF2
  • IMP-3
  • ITGB3
  • LHFPL2
  • OGCHI
  • OLA1
  • ORM1
  • PDGF-A (L)
  • PDGFA
  • PLG
  • QSCN6
  • QSOX
  • QSOX1
  • RARRES2
  • RCJMB04_1m12
  • SOX
  • TGFB1
  • TGFB2
  • TIMP3
  • TOR4A
  • VCL
  • VEGFD
  • VINC1
  • VTI1B
  • mage
  • ogchi
Gallus gallus (chicken)
Interferon alpha/beta signaling
  • ABCE1
  • IFN-gamma
  • IFN2
  • IFNA
  • IFNA1
  • IFNA2
  • IFNA3
  • IFNB
  • JAK1
  • KPNB1
  • LOC100857947
  • LOC100858506
  • LOC100859414
  • LOC768614
  • RCJMB04_17i9
  • RPS27A
  • SOCS1
  • SOCS3
  • UBA80
  • UBB
Gallus gallus (chicken)
Glycolysis
  • ALDOB
  • ALDOC
  • ENO2
  • ENO4
  • GAPD
  • GAPDH
  • GNPDA1
  • GNPDA2
  • GPI
  • PFKL
  • PGAM1
  • PGM2L1
  • PKM
  • RCJMB04_32o10
  • TPI1
Gallus gallus (chicken)
Ion homeostasis
  • ATP1B3
  • ATP2A2
  • ATP2B1
  • ATP2B2
  • CAMK2A
  • COX16
  • ITPR2
  • KCNJ11
  • NCX1
  • PLN
  • PMCA1
  • RCJMB04_3a16
  • SLC8A1
  • SLC8A2
  • STIM1
  • TRPC1
Gallus gallus (chicken)
Regulation of insulin secretion
  • CACNA1D
  • CACNB2
  • KCNJ11
  • LOC107050029
  • PRKACB
  • RAPGEF4
Gallus gallus (chicken)
Insulin receptor recycling
  • ATP6V0A1
  • ATP6V0A4
  • ATP6V0B
  • ATP6V0C
  • ATP6V0D2
  • ATP6V0E1
  • ATP6V1A
  • ATP6V1B2
  • ATP6V1G3
  • CTSD
  • INS
  • INSR
  • PTPN1
  • RCJMB04_10e23
Gallus gallus (chicken)
ROS and RNS production in phagocytes
  • ATP6V0A1
  • ATP6V0A4
  • ATP6V0B
  • ATP6V0C
  • ATP6V0D2
  • ATP6V0E1
  • ATP6V1A
  • ATP6V1B2
  • ATP6V1G3
  • NCF4
  • NOS2
  • NRAMP1
  • RCJMB04_10e23
  • RCJMB04_38b23
  • RCJMB04_9e23
  • SLC11A1
Gallus gallus (chicken)
Synthesis of PC
  • ABHD3
  • CEPT1
  • CHAT
  • CHKA
  • CHPT1
  • MFSD2A
  • NLS1
  • SLC44A5
Gallus gallus (chicken)
Arachidonate production from DAG
  • ABHD12
  • ABHD6
Gallus gallus (chicken)
Glycosphingolipid catabolism
  • ASAH1
  • HEXB
  • LOC418658
  • M6PR
  • NEU2
  • SMPD2
Gallus gallus (chicken)
Stimuli-sensing channels
  • ACCN2
  • ANO10
  • ASIC1
  • BEST3
  • BEST4
  • CATSPER4
  • CLCN4
  • MIL
  • NALCN
  • OSTM1
  • RAF1
  • RCJMB04_16g8
  • RPS27A
  • SCNN1G
  • SGK
  • SGK1
  • SGK2
  • STOM
  • STOML3
  • UBA80
  • UBB
  • WWP1
Gallus gallus (chicken)
B-WICH complex positively regulates rRNA expression
  • ACTB
  • DEK
  • H2A-IX
  • H2AF
  • H2AFX
  • H2AZ2
  • H2B-I
  • H2B-II
  • H2B-III
  • H2B-IV
  • H2B-V
  • H2B-VI
  • H2B-VII
  • H2B-VIII
  • H3-I
  • H3-II
  • H3-III
  • H3-IV
  • H3-IX
  • H3-V
  • H3-VI
  • H3-VII
  • H3-VIII
  • H3-X
  • H4-I
  • H4-II
  • H4-III
  • H4-IV
  • H4-V
  • H4-VI
  • H4-VII
  • HIST1H2B5L
  • LOC100859381
  • LOC426037
  • POLR1B
  • POLR2E
  • POLR2L
  • RPB6
  • SF3B1
  • TAF1B
  • TBP
Gallus gallus (chicken)
Signaling by BMP
  • ACVR2A
  • BMP10
  • BMPR1A
  • BMPR1B
  • BRK-3
  • CER1
  • DSL1
  • GREM2
  • MADH5
  • SMAD1
  • SMAD5
  • SMAD6
  • SMAD7
  • TGFBR3
Gallus gallus (chicken)
Signaling by Activin
  • ACVR1C
  • ACVR2A
  • INHBB
  • LOC769000
  • MADH2
  • MADH3
  • SMAD3
  • TGFBR3
Gallus gallus (chicken)
Negative regulation of the PI3K/AKT network
  • AKT1
  • PHLPP1
  • THEM4
Gallus gallus (chicken)
VEGFA-VEGFR2 Pathway
  • BAIAP2
  • CDC42
  • CRK
  • CYFIP1
  • CYFIP2
  • ELMO2
  • FAK
  • FAK1
  • FYN
  • ITGB3
  • KDR
  • MAPK12
  • MAPK14
  • MAPKAPK2
  • MAPKAPK3
  • NCF4
  • NCK1
  • NCKAP1
  • PAK2
  • PIK3CB
  • PIK3R1
  • PIK3R2
  • PTK2
  • RCJMB04_7b13
  • RCJMB04_9e23
  • RHOA
  • SHB
  • SRC
  • VAV3
  • WASF3
  • cRac1A
  • cRhoA
  • rhoA
Gallus gallus (chicken)
p130Cas linkage to MAPK signaling for integrins
  • CRK
  • FAK
  • FAK1
  • FN1
  • ITGB3
  • PTK2
  • RAP1A
  • RAP1B
  • SRC
Gallus gallus (chicken)
Transcriptional and post-translational regulation of MITF-M expression and activity
  • AIMP1
  • DARS
  • EPRS
  • KIT
  • KITLG
  • RPS6KA
  • RSK
  • SCF
  • WNT3A
  • XPO1
  • chPKCI
Gallus gallus (chicken)
Adenosine P1 receptors
  • ADORA1
  • ADORA2B
Gallus gallus (chicken)
Surfactant metabolism
  • ADORA2B
  • ADRA2A
  • ADRA2C
  • GATA6
  • LL
  • LMCD1
  • SFTPA1
  • SLC34A1
  • SP-A
  • TTF1
Gallus gallus (chicken)
Regulation of IGF Activity by IGFBP
  • ALB
  • APLP2
  • APOA1
  • BMP4
  • CCN1
  • CDH2
  • CG-1B
  • CST3
  • CYR61
  • DNAJC3
  • FGF23
  • FN1
  • FUCA2
  • HSP90B1
  • IGF1
  • IGF2
  • IGFBP2
  • IGFBP5
  • IL6
  • MATN3
  • MFGE8
  • MGAT4A
  • MXRA8
  • PENK
  • PNPLA2
  • PRSS23
  • QSCN6
  • QSOX
  • QSOX1
  • RCJMB04_11h1
  • RCN1
  • SDC2
  • SERPIND1
  • SOX
  • STC2
Gallus gallus (chicken)
Post-translational protein phosphorylation
  • ALB
  • APLP2
  • APOA1
  • BMP4
  • CCN1
  • CDH2
  • CG-1B
  • CST3
  • CYR61
  • DNAJC3
  • FGF23
  • FN1
  • FUCA2
  • HSP90B1
  • IGFBP5
  • IL6
  • MATN3
  • MFGE8
  • MGAT4A
  • MXRA8
  • PENK
  • PNPLA2
  • PRSS23
  • QSCN6
  • QSOX
  • QSOX1
  • RCJMB04_11h1
  • RCN1
  • SDC2
  • SERPIND1
  • SOX
  • STC2
Gallus gallus (chicken)

About Release Notes Help Feedback

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International


GlyCosmos Portal v4.0.0

Last updated: August 19, 2024