GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **26 - 50** of **263** in total

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Pathway Name	Protein Name ▼	UniProt ID	Gene Symbol	Organism	GlyTouCan ID
Highly calcium permeable nicotinic acetylcholine receptors	Neuronal acetylcholine receptor subunit alpha-3 Neuronal acetylcholine receptor subunit alpha-4 Neuronal acetylcholine receptor subunit beta-4	F1P4U2 P09481 P09482	CHRNA3 CHRNA4 CHRNB4	Gallus gallus (chicken)
Highly calcium permeable postsynaptic nicotinic acetylcholine receptors	Neuronal acetylcholine receptor subunit alpha-3 Neuronal acetylcholine receptor subunit alpha-4 Neuronal acetylcholine receptor subunit alpha-9 Neuronal acetylcholine receptor subunit beta-4	F1P4U2 P09481 P09482 Q9PTS8	CHRNA3 CHRNA4 CHRNA9 CHRNB4	Gallus gallus (chicken)
Metal ion SLC transporters	Natural resistance-associated macrophage protein 1 Solute carrier family 40 member Solute carrier family 41 member Solute carrier family 41 member	E1C334 F1NWZ7 P51027 Q5F3K3	NRAMP1 SLC11A1 SLC40A1 SLC41A1 SLC41A2	Gallus gallus (chicken)
Ion influx/efflux at host-pathogen interface	Natural resistance-associated macrophage protein 1 PDZ domain-containing protein 11	P51027 Q5ZIK2	NRAMP1 PDZD11 PDZK11 SLC11A1	Gallus gallus (chicken)
Receptor-type tyrosine-protein phosphatases	NT-3 growth factor receptor SLIT and NTRK like family member 1 SLIT and NTRK like family member 2	F1NEZ4 F1NZH0 Q91044	LOC121106448 NTRK3 SLITRK1 TRKC	Gallus gallus (chicken)
Activated NTRK3 signals through PLCG1	NT-3 growth factor receptor Neurotrophin-3	A0A3Q2U804 Q91044	NTF3 NTRK3 TRKC	Gallus gallus (chicken)
NTF3 activates NTRK3 signaling	NT-3 growth factor receptor Neurotrophin-3	A0A3Q2U804 Q91044	NTF3 NTRK3 TRKC	Gallus gallus (chicken)
Activated NTRK3 signals through PI3K	NT-3 growth factor receptor Neurotrophin-3 Proto-oncogene tyrosine-protein kinase Src	A0A3Q2U804 P00523 Q91044	NTF3 NTRK3 SRC TRKC	Gallus gallus (chicken)
Nicotinamide salvaging	NAD-capped RNA hydrolase NUDT12 Nicotinamide phosphoribosyltransferase Prostaglandin G/H synthase 2 Sodium-coupled monocarboxylate transporter 1	E1C2E5 F1P5L0 P27607 Q58I02	CEF-147 NAMPTP1 NUDT12 PBEF1 PTGS2 SLC5A8	Gallus gallus (chicken)
Neurotransmitter release cycle	N-acylethanolamine-hydrolyzing acid amidase	F1NCS3	NAAA	Gallus gallus (chicken)
p75NTR recruits signalling complexes	Myeloid differentiation primary response protein MyD88 Polyubiquitin-B Protein kinase C Sequestosome 1 TNF receptor-associated factor Tumor necrosis factor receptor superfamily member 16 Ubiquitin B Ubiquitin-ribosomal protein eS31 fusion protein	A0A1D5P546 A0A1D5PLN4 A5HNF6 E1BWA3 E1C626 P0CG62 P18519 P79781	MYD88 NGFR PRKCI RPS27A SQSTM1 TNFRSF16 TRAF6 UBA80 UBB	Gallus gallus (chicken)
Muscarinic acetylcholine receptors	Muscarinic acetylcholine receptor M2 Muscarinic acetylcholine receptor	F1P0I0 P30372	CHRM2 CHRM5 CM2	Gallus gallus (chicken)
Downregulation of SMAD2/3:SMAD4 transcriptional activity	Mothers against decapentaplegic homolog 3 Mothers against decapentaplegic homolog Mothers against decapentaplegic homolog Polyubiquitin-B Protein ATP1B4 SKI like proto-onco Ski oncogene Ubiquitin B Ubiquitin-ribosomal protein eS31 fusion protein	A0A1D5NUH3 A0A1D5P546 E1BSJ7 F1P0N0 P0CG62 P79781 P84023 Q2HZ96 Q8UWF3	ATP1B4 LOC769000 MADH2 MADH3 RPS27A SKI SKIL SMAD3 UBA80 UBB	Gallus gallus (chicken)
Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein	Mannosyltransferase N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase	A0A1D5PQ50 A0A1L1RT72 F1P077	ALG12 DPAGT1	Gallus gallus (chicken)
Lectin-mediated initiation of complement cascade	MAp19 Mannan-binding lectin associated serine protease 2 Mannan-binding lectin associated serine protease 3 Mannose-binding protein	Q6Q1Q7 Q6Q1Q8 Q6Q1Q9 Q98TA4	MASP2 MBL	Gallus gallus (chicken)
Lactose synthesis	Lysozyme C	P00698	LYZ	Gallus gallus (chicken)	G58161NS G74621DY
P2Y receptors	Lysophosphatidic acid receptor 4 P2Y purinoceptor 1 P2Y purinoceptor 3	E1BWJ9 P34996 Q98907	LPAR4 P2RY1 P2RY3	Gallus gallus (chicken)
TFAP2 (AP-2) family regulates transcription of cell cycle factors	Lysine-specific demethylase 5B Myc proto-oncogene protein Transcription factor AP-2 gamma	E1C5K7 P01109 Q5F3R2	JARID1B KDM5B MYC TFAP2C	Gallus gallus (chicken)
TLR4 cascade	Lymphocyte antigen 96 Monocyte differentiation antigen CD14 Toll-like receptor 4	A0A8V0XHS1 B0BL87 Q7ZTG5	Cd14 LY96 TLR4	Gallus gallus (chicken)
Assembly of active LPL and LIPC lipase complexes	Lipoprotein lipase Uncharacterized protein furin	A0A1L1RJC1 P11602 Q91000	FURIN LOC101747868 LPL	Gallus gallus (chicken)
MyD88:TIRAP-dependent cascade initiated on plasma membrane	Interleukin-1 receptor-associated kinase 4 Interleukin-1 receptor-associated kinase-like 2 Lymphocyte antigen 96 Myeloid differentiation primary response protein MyD88 Toll-like receptor 1-like protein b Toll-like receptor 1 Toll-like receptor 2 type-1 Toll-like receptor 4 Toll/interleukin-1 receptor domain-containing adapter protein	A0A8V0XHS1 A5H0S2 A5HNF6 Q4U127 Q5F382 Q5WA51 Q5ZJM6 Q7ZTG5 Q9DD78	LY96 MYD88 RCJMB04_17b10 RCJMB04_29d24 TIRAP TLR1 TLR1Lb TLR2-1 TLR4	Gallus gallus (chicken)
Interleukin-20 family signaling	Interferon lambda receptor 1 Interferon lambda-3 Interleukin 22 receptor subunit alpha 1 Interleukin 22 Interleukin family protein Signal transducer and activator of transcription 3 Signal transducer and activator of transcription Signal transducer and activator of transcription Tyrosine-protein kinase Tyrosine-protein phosphatase non-receptor type 11	A0A1D5PNV3 B4ER10 E1BRV0 E1C1U2 E1C5G0 F1NMJ9 K9JA28 Q5ZJK3 Q6DV79 Q90687	IFNL IFNL3 IFNLR1 IL22 IL22RA1 IL28 IL28B IL28RA JAK1 LOC107055197 PTPN11 RCJMB04_17i9 STAT3 STAT4	Gallus gallus (chicken)
Regulation of IFNG signaling	Interferon gamma receptor 2 (interferon gamma transducer 1) Interferon gamma Signal transducer and activator of transcription Small ubiquitin-related modifier 1 Suppressor of cytokine signaling 1 Suppressor of cytokine signaling 3 Tyrosine-protein kinase	A0A1D5PS87 B6RCQ2 F1NMJ9 P49708 Q5ZJK3 Q8QGH2 R4GJH9	IFNG IFNGR2 JAK1 RCJMB04_17i9 SOCS1 SOCS3 SUMO1	Gallus gallus (chicken)
IFNG signaling activates MAPKs	Interferon gamma receptor 2 (interferon gamma transducer 1) Interferon gamma RAF proto-oncogene serine/threonine-protein kinase Tyrosine-protein kinase	A0A1D5PS87 F1NMJ9 P05625 P49708	IFNG IFNGR2 JAK1 MIL RAF1	Gallus gallus (chicken)
Interferon gamma signaling	Interferon gamma receptor 2 (interferon gamma transducer 1) Interferon gamma Protein kinase C delta type Signal transducer and activator of transcription Suppressor of cytokine signaling 1 Suppressor of cytokine signaling 3 Tyrosine-protein kinase calcium/calmodulin-dependent protein kinase	A0A1D5PS87 B6RCQ2 F1NGS8 F1NMJ9 F1P3G1 P49708 Q5ZJK3 R4GJH9	CAMK2A IFNG IFNGR2 JAK1 PRKCD RCJMB04_17i9 SOCS1 SOCS3	Gallus gallus (chicken)

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