GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 101 - 125 of 263 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID ▼
MyD88 cascade initiated on plasma membrane
  • H2
  • MYD88
  • RCJMB04_17b10
  • RCJMB04_29d24
  • TLR15
  • TLR5
  • flaF
  • fliC
  • fljB
  • hag
Gallus gallus (chicken)
FGFRL1 modulation of FGFR1 signaling
  • FGF-18
  • FGF-3
  • FGF10
  • FGF18
  • FGF2
  • FGF23
  • FGF3
  • FGF4
  • FGF8
  • FGFRL1
Gallus gallus (chicken)
Activated NTRK2 signals through PLCG1
  • BDNF
  • NTRK2
  • TRKB
Gallus gallus (chicken)
Interleukin-20 family signaling
  • IFNL
  • IFNL3
  • IFNLR1
  • IL22
  • IL22RA1
  • IL28
  • IL28B
  • IL28RA
  • JAK1
  • LOC107055197
  • PTPN11
  • RCJMB04_17i9
  • STAT3
  • STAT4
Gallus gallus (chicken)
Signaling by Type 1 Insulin-like Growth Factor 1 Receptor (IGF1R)
  • IGF1
  • IGF2
Gallus gallus (chicken)
MHC class II antigen presentation
  • AP1G1
  • AP1M1
  • AP1S2
  • AP2A2
  • AP2M1
  • ARF1
  • BLB1
  • BLB2
  • CLTA
  • CTSD
  • CTSV
  • Ii
  • RCJMB04_1m17
  • SH3GL2
  • SH3P4
Gallus gallus (chicken)
Generic Transcription Pathway
  • CCNC
  • LOC101747670
  • MED1
  • MED17
  • MED20
  • MED30
  • MED31
  • MED4
  • MED7
  • TRFP
  • ZNF704
  • ZNF706
Gallus gallus (chicken)
RAF/MAP kinase cascade
  • ACTN2
  • ANGPT1
  • AREG
  • BTC
  • CAMK2A
  • CEK1
  • CEK2
  • CEK3
  • CSF2RA
  • DLG3
  • EGFR
  • EPGN
  • EREG
  • FAK
  • FAK1
  • FGF-18
  • FGF-3
  • FGF1
  • FGF10
  • FGF18
  • FGF19
  • FGF2
  • FGF23
  • FGF3
  • FGF4
  • FGF6
  • FGF7
  • FGF8
  • FGFR1
  • FGFR2
  • FGFR3
  • FGFR4
  • FRS2
  • FYN
  • Fgf16
  • Fgf7
  • GDNFRA
  • GFRA1
  • GRB2
  • GRIN1
  • GRIN2B
  • HBEGF
  • HEGFL
  • HRAS
  • HRAS1
  • IL5
  • IL5RA
  • KIT
  • KITLG
  • KRAS
  • LOC107049501
  • NRAS
  • NRG2
  • PDGF-A (L)
  • PDGFA
  • PIK3CB
  • PIK3R1
  • PIK3R2
  • PTK2
  • PTPRA
  • RASGEF1A
  • RASGRP3
  • RCJMB04_6d2
  • SCF
  • SHC1
  • SOS1
  • SPTBN1
  • TEK
Gallus gallus (chicken)
Activated NTRK3 signals through PLCG1
  • NTF3
  • NTRK3
  • TRKC
Gallus gallus (chicken)
PRC2 methylates histones and DNA
  • AEBP2
  • DNMT3A
  • Dnmt3a
  • EED
  • H2A-IX
  • H2AF
  • H2AFX
  • H2AZ2
  • H2B-I
  • H2B-II
  • H2B-III
  • H2B-IV
  • H2B-V
  • H2B-VI
  • H2B-VII
  • H2B-VIII
  • H3-I
  • H3-II
  • H3-III
  • H3-IV
  • H3-IX
  • H3-V
  • H3-VI
  • H3-VII
  • H3-VIII
  • H3-X
  • H4-I
  • H4-II
  • H4-III
  • H4-IV
  • H4-V
  • H4-VI
  • H4-VII
  • HIST1H2B5L
  • LOC100859381
  • LOC426037
  • RBBP4
Gallus gallus (chicken)
Regulation of IFNG signaling
  • IFNG
  • IFNGR2
  • JAK1
  • RCJMB04_17i9
  • SOCS1
  • SOCS3
  • SUMO1
Gallus gallus (chicken)
Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell
  • B-FIV
  • B2M
  • BF1
  • BF2
  • BFIV21
  • CD1.2
  • CD1A2
  • CD200R1A
  • CD300LG
  • CD40L
  • CD40LG
  • CD48
  • ITGA4
  • KRABZFP
  • RCJMB04_10g5
  • TNFSF5
  • TREM2
  • TSTD1
Gallus gallus (chicken)
Ion transport by P-type ATPases
  • ATP10B
  • ATP12A
  • ATP1B3
  • ATP2A2
  • ATP2B1
  • ATP2B2
  • ATP4B
  • ATP8A1
  • ATP8A2
  • ATP9A
  • ATP9B
  • CAMK2A
  • PDZD11
  • PDZK11
  • PLN
  • PMCA1
  • RCJMB04_3a16
Gallus gallus (chicken)
NF-kB is activated and signals survival
  • NFKB1
  • NGFR
  • RPS27A
  • SQSTM1
  • TNFRSF16
  • TRAF6
  • UBA80
  • UBB
Gallus gallus (chicken)
Negative regulation of the PI3K/AKT network
  • AKT1
  • PHLPP1
  • THEM4
Gallus gallus (chicken)
MAP2K and MAPK activation
  • BRAF
  • FN1
  • HRAS
  • HRAS1
  • IQGAP3
  • ITGB3
  • KRAS
  • KSR2
  • MIL
  • NRAS
  • RAF1
  • RAP1A
  • RAP1B
  • RCJMB04_27f19
  • RMIL
  • SRC
  • VCL
  • VINC1
  • YWHAB
Gallus gallus (chicken)
Lectin-mediated initiation of complement cascade
  • MASP2
  • MBL
Gallus gallus (chicken)
Phospholipase C-mediated cascade; FGFR2
  • CEK3
  • FGF-18
  • FGF-3
  • FGF1
  • FGF10
  • FGF18
  • FGF2
  • FGF23
  • FGF3
  • FGF4
  • FGF6
  • FGF7
  • FGF8
  • FGFR2
  • Fgf16
  • Fgf7
Gallus gallus (chicken)
Butyrophilin (BTN) family interactions
Gallus gallus (chicken)
Aspirin ADME
  • ABCC3
  • ALB
  • BSG
  • CYP2D6
  • RCJMB04_4e8
Gallus gallus (chicken)
Surfactant metabolism
  • ADORA2B
  • ADRA2A
  • ADRA2C
  • GATA6
  • LL
  • LMCD1
  • SFTPA1
  • SLC34A1
  • SP-A
  • TTF1
Gallus gallus (chicken)
B-WICH complex positively regulates rRNA expression
  • ACTB
  • DEK
  • H2A-IX
  • H2AF
  • H2AFX
  • H2AZ2
  • H2B-I
  • H2B-II
  • H2B-III
  • H2B-IV
  • H2B-V
  • H2B-VI
  • H2B-VII
  • H2B-VIII
  • H3-I
  • H3-II
  • H3-III
  • H3-IV
  • H3-IX
  • H3-V
  • H3-VI
  • H3-VII
  • H3-VIII
  • H3-X
  • H4-I
  • H4-II
  • H4-III
  • H4-IV
  • H4-V
  • H4-VI
  • H4-VII
  • HIST1H2B5L
  • LOC100859381
  • LOC426037
  • POLR1B
  • POLR2E
  • POLR2L
  • RPB6
  • SF3B1
  • TAF1B
  • TBP
Gallus gallus (chicken)
Deposition of new CENPA-containing nucleosomes at the centromere
  • APITD1
  • CENPH
  • CENPI
  • CENPL
  • CENPM
  • CENPN
  • CENPO
  • CENPS
  • CENPT
  • CENPW
  • H2A-IX
  • H2AF
  • H2AFX
  • H2AZ2
  • H2B-I
  • H2B-II
  • H2B-III
  • H2B-IV
  • H2B-V
  • H2B-VI
  • H2B-VII
  • H2B-VIII
  • H4-I
  • H4-II
  • H4-III
  • H4-IV
  • H4-V
  • H4-VI
  • H4-VII
  • HIST1H2B5L
  • LOC100859381
  • LOC426037
  • MIS18A
  • OIP5
  • RBBP4
  • RUVBL1
Gallus gallus (chicken)
GRB2:SOS provides linkage to MAPK signaling for Integrins
  • FAK
  • FAK1
  • FN1
  • GRB2
  • ITGB3
  • PTK2
  • RAP1A
  • RAP1B
  • SOS1
  • SRC
Gallus gallus (chicken)
G alpha (i) signalling events
  • ADORA1
  • ADRA2A
  • ADRA2C
  • APLN
  • APLNR
  • APLNR1
  • BDKRB1
  • CCL19
  • CCL20
  • CCL26
  • CCL4
  • CCLL4
  • CCLi10
  • CCLi6
  • CCLi7
  • CCLi8
  • CCLi9
  • CCR5
  • CCR7
  • CCR8
  • CCRa
  • CEF4
  • CHRM2
  • CM2
  • CX3CL1
  • CX3CR1
  • CXCL13
  • CXCL8
  • CXCR1
  • CXCR4
  • CXCR5
  • DRD3
  • DRD4
  • EMF1
  • EP3
  • GABBR2
  • GAL
  • GALR
  • GNAI1
  • GNAI2
  • GNAI3
  • GNAT2
  • GNAT3
  • GNB1
  • GNB3
  • GNB4
  • GNG10
  • GNG12
  • GNG13
  • GNG2
  • GNG5
  • GNGT2
  • GPER1
  • GPR1
  • GPR18
  • GPR37L1
  • GPR55
  • GPSM2
  • GRM3
  • Galphai3
  • HTR1B
  • HTR1D
  • HTR1E
  • HTR1F
  • IL8
  • LOC100857191
  • LOC101747503
  • LOC428525
  • LPAR1
  • LPAR3
  • MIP-3alpha
  • MTNR1B
  • NMS
  • NMU
  • NMUR1
  • NMUR2
  • NPBWR1
  • NPW
  • NPY
  • NPY1R
  • NPY2R
  • NPY4R
  • NPY5R
  • OPN3
  • OPN5
  • OPRK1
  • OPRL1
  • OPRM1
  • PENK
  • PMCH
  • PNOC
  • PPY
  • PTGER3
  • PYY
  • RGR
  • RGS17
  • RGS18
  • RGS20
  • RGS4
  • RGS5
  • RGS7
  • RGS8
  • RHO
  • RRH
  • S1PR2
  • SCYA4
  • SRC
  • SS1R
  • SS2
  • SS2R
  • SS3R
  • SST
  • SSTR1
  • SSTR2
  • SSTR4
  • SSTR5
  • SUCNR1
  • TAS2R1
  • TAS2R40
  • TAS2R7
  • UTS2R
  • XCL1
  • cOpn3m
  • k60
  • scyc1
Gallus gallus (chicken)

About Release Notes Help Feedback

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International


GlyCosmos Portal v4.0.0

Last updated: August 19, 2024