GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **101 - 125** of **263** in total

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Pathway Name ▲	Protein Name	UniProt ID	Gene Symbol	Organism	GlyTouCan ID
Highly calcium permeable nicotinic acetylcholine receptors	Neuronal acetylcholine receptor subunit alpha-3 Neuronal acetylcholine receptor subunit alpha-4 Neuronal acetylcholine receptor subunit beta-4	F1P4U2 P09481 P09482	CHRNA3 CHRNA4 CHRNB4	Gallus gallus (chicken)
Highly calcium permeable postsynaptic nicotinic acetylcholine receptors	Neuronal acetylcholine receptor subunit alpha-3 Neuronal acetylcholine receptor subunit alpha-4 Neuronal acetylcholine receptor subunit alpha-9 Neuronal acetylcholine receptor subunit beta-4	F1P4U2 P09481 P09482 Q9PTS8	CHRNA3 CHRNA4 CHRNA9 CHRNB4	Gallus gallus (chicken)
Highly sodium permeable postsynaptic acetylcholine nicotinic receptors	Neuronal acetylcholine receptor subunit alpha-3 Neuronal acetylcholine receptor subunit alpha-4 Neuronal acetylcholine receptor subunit beta-4	F1P4U2 P09481 P09482	CHRNA3 CHRNA4 CHRNB4	Gallus gallus (chicken)
Hormone ligand-binding receptors	Follitropin subunit beta Glycoprotein hormones alpha chain Progonadoliberin-1 Thyrotropin subunit beta Type 1/III gonadotropin-releasing hormone receptor hexahelical variant	B5G4W1 F1NJD3 O57340 P37042 Q8QGF8	CGA FSH beta FSHB FSHb GNRH1 GNRHR1/III TSHB	Gallus gallus (chicken)
Hyaluronan biosynthesis and export	Hyaluronan synthase 3	O57425	HAS3	Gallus gallus (chicken)	G35674CY
Hyaluronan uptake and degradation	Beta-hexosaminidase Calcineurin B homologous protein 1 Glucuronidase beta Lymphatic vessel endothelial hyaluronan receptor 1	A0A1L1RSD2 E1C9I1 F1NTQ2 Q5ZM44	CHP CHP1 GUSB HEXB LYVE1	Gallus gallus (chicken)	G35674CY
IFNG signaling activates MAPKs	Interferon gamma receptor 2 (interferon gamma transducer 1) Interferon gamma RAF proto-oncogene serine/threonine-protein kinase Tyrosine-protein kinase	A0A1D5PS87 F1NMJ9 P05625 P49708	IFNG IFNGR2 JAK1 MIL RAF1	Gallus gallus (chicken)
IRS-mediated signalling	Phosphatidylinositol 3-kinase regulatory subunit alpha Phosphoinositide-3-kinase regulatory subunit 2 phosphatidylinositol-4,5-bisphosphate 3-kinase	A0A3Q3ACS4 E1C2C5 Q5F4A2	PIK3CB PIK3R1 PIK3R2	Gallus gallus (chicken)
IRS-related events triggered by IGF1R	Insulin-like growth factor I Insulin-like growth factor II	P18254 P33717	IGF1 IGF2	Gallus gallus (chicken)
Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell	Beta-2-microglobulin CD1.2 antigen CD300 molecule like family member g CD40 ligand CD48 CXADR Ig-like cell adhesion molecule Cell surface glycoprotein CD200 receptor 1-A Ig-like domain-containing protein Integrin subunit alpha 4 KRAB domain containing zinc finger protein MHC BF1 class I MHC class I alpha chain 2 Triggering receptor expressed on myeloid cells 2 Uncharacterized protein	A0A1D5PIR0 A0A1D5PKL9 A0A1D5PLP7 A0ZXL5 F1NBK7 F1NSL7 K4L906 P21611 Q2YHT7 Q52Z74 Q5ZKJ6 Q95601 Q9I8D8 R4GFS8	B-FIV B2M BF1 BF2 BFIV21 CD1.2 CD1A2 CD200R1A CD300LG CD40L CD40LG CD48 ITGA4 KRABZFP RCJMB04_10g5 TNFSF5 TREM2 TSTD1	Gallus gallus (chicken)
Inactivation, recovery and regulation of the phototransduction cascade	Cyclic nucleotide-gated channel rod photoreceptor subunit alpha G protein-coupled receptor kinase G protein-coupled receptor kinase Guanylyl cyclase-activating protein 1 Guanylyl cyclase-activating protein 2 Rhodopsin Serine/threonine-protein phosphatase	E1BTX9 E1C4P5 F1P3Y2 P79880 P79881 Q5ZKL2 Q90980	GCAP1 GCAP2 GRK4 GRK7 GUCA1A GUCA1B PPEF1 RHO	Gallus gallus (chicken)
Initial triggering of complement	Collectin-10 Collectin-11 Complement C1q B chain Complement C1q C chain Mannose-binding protein Uncharacterized protein complement subcomponent C1r	A0A1D5PGB2 A0A1D5PIR0 A0A3Q3A736 F1NAB7 F1NH19 Q2LK95 Q98TA4	C1QB C1QC C1R CL1 COLEC10 COLEC11 MBL	Gallus gallus (chicken)	G49108TO G57321FI
Insertion of tail-anchored proteins into the endoplasmic reticulum membrane	Cytochrome b5 Major prion protein homolog Protein transport protein Sec61 subunit beta	F1NWX7 P00174 P27177	CYB5 CYB5A PRN-P PRNP SEC61B	Gallus gallus (chicken)
Insulin receptor recycling	ATPase H+ transporting V0 subunit b Cathepsin D H(+)-transporting two-sector ATPase Insulin Tyrosine-protein kinase receptor V-type proton ATPase proteolipid subunit V-type proton ATPase subunit G V-type proton ATPase subunit a V-type proton ATPase subunit a V-type proton ATPase subunit d 2 V-type proton ATPase subunit VATE1 ATPase Vacuolar proton pump subunit B protein-tyrosine-phosphatase	A0A1D5P5R9 A0A1D5P6L6 A0A1D5P6T3 A0A1D5PCU0 A0A1D5PP57 A0A1I7Q402 A0A1L1RUN2 F1NBW2 P67970 Q05744 Q5ZHL0 Q5ZJ19 Q5ZJC4 Q5ZKJ9	ATP6V0A1 ATP6V0A4 ATP6V0B ATP6V0C ATP6V0D2 ATP6V0E1 ATP6V1A ATP6V1B2 ATP6V1G3 CTSD INS INSR PTPN1 RCJMB04_10e23	Gallus gallus (chicken)
Insulin receptor signalling cascade	Growth factor receptor bound protein 10 Growth factor receptor-bound protein 2 Insulin SHC-transforming protein 1 SOS Ras/Rac guanine nucleotide exchange factor 1 Tyrosine-protein kinase receptor	A0A1D5NYP8 A0A1D5P405 A0A1D5P6T3 A0A1D5PEZ2 A3R0S3 P67970	GRB10 GRB2 INS INSR SHC1 SOS1	Gallus gallus (chicken)
Integrin cell surface interactions	Basigin Collagen type IV alpha 1 chain Fibronectin Integrin alpha-6 Integrin beta Integrin subunit alpha 4 Integrin subunit alpha 9 Leukocyte surface antigen CD47 Lumican	A0A1D5P8P3 A0A1D5PKL9 A0A1D5PQP8 P11722 P17790 P26007 P51890 Q6XFR1 Q92071	BSG CD47 COL4A1 FN1 ITGA4 ITGA6 ITGA9 ITGB3 LDC LUM	Gallus gallus (chicken)
Integrin signaling	3-phosphoinositide-dependent protein kinase 1 Fibronectin Focal adhesion kinase 1 Integrin beta Proto-oncogene tyrosine-protein kinase Src RAC-alpha serine/threonine-protein kinase RAS guanyl-releasing protein 1 Rap guanine nucleotide exchange factor 4 Ras-related protein Rap-1b SHC-transforming protein 1 Tyrosine-protein kinase SYK protein-tyrosine-phosphatase small monomeric GTPase	A0A1D5NYP8 A0A1D5PMC0 A0A1I7Q402 A0A3Q2U4X3 F1N9Y5 F1NSA8 P00523 P11722 Q00944 Q5F3U4 Q5F3V4 Q5ZHX1 Q92071	AKT1 FAK FAK1 FN1 ITGB3 PTK2 PTPN1 RAP1A RAP1B RAPGEF4 RCJMB04_6d2 RCJMB04_6p10 SHC1 SRC SYK	Gallus gallus (chicken)
Interferon alpha/beta signaling	ATP binding cassette subfamily E member 1 Interferon alpha Interferon type A1/A2 Interferon type B Interferon Karyopherin subunit beta 1 Polyubiquitin-B Signal transducer and activator of transcription Suppressor of cytokine signaling 1 Suppressor of cytokine signaling 3 Tyrosine-protein kinase Ubiquitin B Ubiquitin-ribosomal protein eS31 fusion protein	A0A1D5P1W7 A0A1D5P546 B0FLN7 B6RCQ2 F1NMJ9 P0CG62 P42165 P79781 Q5ZJK3 Q5ZJX6 Q90873 Q9PWI5 R4GJH9	ABCE1 IFN-gamma IFN2 IFNA IFNA1 IFNA2 IFNA3 IFNB JAK1 KPNB1 LOC100857947 LOC100858506 LOC100859414 LOC768614 RCJMB04_17i9 RPS27A SOCS1 SOCS3 UBA80 UBB	Gallus gallus (chicken)
Interferon gamma signaling	Interferon gamma receptor 2 (interferon gamma transducer 1) Interferon gamma Protein kinase C delta type Signal transducer and activator of transcription Suppressor of cytokine signaling 1 Suppressor of cytokine signaling 3 Tyrosine-protein kinase calcium/calmodulin-dependent protein kinase	A0A1D5PS87 B6RCQ2 F1NGS8 F1NMJ9 F1P3G1 P49708 Q5ZJK3 R4GJH9	CAMK2A IFNG IFNGR2 JAK1 PRKCD RCJMB04_17i9 SOCS1 SOCS3	Gallus gallus (chicken)
Interleukin-20 family signaling	Interferon lambda receptor 1 Interferon lambda-3 Interleukin 22 receptor subunit alpha 1 Interleukin 22 Interleukin family protein Signal transducer and activator of transcription 3 Signal transducer and activator of transcription Signal transducer and activator of transcription Tyrosine-protein kinase Tyrosine-protein phosphatase non-receptor type 11	A0A1D5PNV3 B4ER10 E1BRV0 E1C1U2 E1C5G0 F1NMJ9 K9JA28 Q5ZJK3 Q6DV79 Q90687	IFNL IFNL3 IFNLR1 IL22 IL22RA1 IL28 IL28B IL28RA JAK1 LOC107055197 PTPN11 RCJMB04_17i9 STAT3 STAT4	Gallus gallus (chicken)
Intestinal hexose absorption	Solute carrier family 2 member 5	F1NVV4	SLC2A5	Gallus gallus (chicken)	G58161NS G93924TT
Intrinsic Pathway of Fibrin Clot Formation	Coagulation factor X Glycoprotein IX platelet Glycoprotein Ib platelet subunit beta Prolylcarboxypeptidase Serpin family D member 1 Serpin family E member 2 Tsukushi	A0A1D5PLZ2 A0A1D5PVG8 A0A3Q3AXX7 E1BWU2 F1P1G3 P25155 Q65Z91	F10 FX GP1BB GP9 LRRC54 PRCP SERPIND1 SERPINE2 TSK TSKU	Gallus gallus (chicken)
Ion homeostasis	ATP-sensitive inward rectifier potassium channel 11 Calcium-transporting ATPase Calcium-transporting ATPase Cardiac phospholamban FXYD domain-containing ion transport regulator Inositol 1,4,5-trisphosphate receptor Plasma membrane calcium-transporting ATPase 1 Short transient receptor potential channel 1 Sodium/calcium exchanger 1 Sodium/potassium-transporting ATPase subunit beta-3 Solute carrier family 8 member A2 Solute carrier family 8 member A3 Stromal interaction molecule 1 calcium/calmodulin-dependent protein kinase	A0A1D5NWP2 A0A1D5PZT6 A0A1L1RKB7 A0A3Q2U0I3 F1NBC9 F1NGS8 F1P023 F1P1X4 P33879 Q000J5 Q5ZM59 Q6DMS2 Q98SH2 R4GK80	ATP1B3 ATP2A2 ATP2B1 ATP2B2 CAMK2A COX16 ITPR2 KCNJ11 NCX1 PLN PMCA1 RCJMB04_3a16 SLC8A1 SLC8A2 STIM1 TRPC1	Gallus gallus (chicken)
Ion influx/efflux at host-pathogen interface	Natural resistance-associated macrophage protein 1 PDZ domain-containing protein 11	P51027 Q5ZIK2	NRAMP1 PDZD11 PDZK11 SLC11A1	Gallus gallus (chicken)
Ion transport by P-type ATPases	Calcium-transporting ATPase Calcium-transporting ATPase Cardiac phospholamban FXYD domain-containing ion transport regulator PDZ domain-containing protein 11 Phospholipid-transporting ATPase Phospholipid-transporting ATPase Phospholipid-transporting ATPase Phospholipid-transporting ATPase Phospholipid-transporting ATPase Plasma membrane calcium-transporting ATPase 1 Sodium/potassium-transporting ATPase subunit alpha Sodium/potassium-transporting ATPase subunit beta-3 Sodium/potassium-transporting ATPase subunit beta calcium/calmodulin-dependent protein kinase	A0A1D5P8E2 A0A1L1RKB7 A0A3Q2U0I3 A0A3Q2U2N5 E1BX05 F1NGS8 F1NUR8 F1NZB7 F1P2K5 P33879 Q07420 Q5ZIK2 Q5ZM59 Q98SH2 R4GK80	ATP10B ATP12A ATP1B3 ATP2A2 ATP2B1 ATP2B2 ATP4B ATP8A1 ATP8A2 ATP9A ATP9B CAMK2A PDZD11 PDZK11 PLN PMCA1 RCJMB04_3a16	Gallus gallus (chicken)

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