GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **126 - 150** of **263** in total

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Pathway Name ▼	Protein Name	UniProt ID	Gene Symbol	Organism	GlyTouCan ID
Metal ion SLC transporters	Natural resistance-associated macrophage protein 1 Solute carrier family 40 member Solute carrier family 41 member Solute carrier family 41 member	E1C334 F1NWZ7 P51027 Q5F3K3	NRAMP1 SLC11A1 SLC40A1 SLC41A1 SLC41A2	Gallus gallus (chicken)
Metabolism of folate and pterines	Dihydrofolate reductase Proton-coupled folate transporter Reduced folate transporter Solute carrier family 25 member 32 methylenetetrahydrofolate reductase (NADPH)	A0A1D5PVR1 A0A1D5PZX4 A3RKL3 E1BXL1 F1NJ67	DHFR MTHFR PCFT SLC19A1 SLC25A32 SLC46A1	Gallus gallus (chicken)
Metabolism of Angiotensinogen to Angiotensins	Cathepsin D Neprilysin	Q05744 Q67BJ2	CTSD MME	Gallus gallus (chicken)
MHC class II antigen presentation	ADP-ribosylation factor AP complex subunit sigma AP-1 complex subunit gamma AP-1 complex subunit mu-1 AP-2 complex subunit alpha AP-2 complex subunit mu Cathepsin D Cathepsin V Clathrin light chain Endophilin-A1 Invariant chain isoform p41 MHC class II beta chain 2 Major histocompatibility complex class II beta chain BLB1 Peptidase C1A papain C-terminal domain-containing protein	A0A1D5NV94 A0A1D5PLI8 A0A3Q2U5N2 A5HUL4 F1NDA9 F1NHS7 F1NN08 F1NYJ1 Q05744 Q5ZMG7 Q5ZMK0 Q5ZMP6 Q6J613 Q8AXV1	AP1G1 AP1M1 AP1S2 AP2A2 AP2M1 ARF1 BLB1 BLB2 CLTA CTSD CTSV Ii RCJMB04_1m17 SH3GL2 SH3P4	Gallus gallus (chicken)
MAP2K and MAPK activation	14-3-3 protein beta/alpha Dual specificity mitogen-activated protein kinase kinase 1 Fibronectin GTPase HRas GTPase NRas IQ motif containing GTPase activating protein 1 Integrin beta Kinase suppressor of ras 2 Proto-oncogene tyrosine-protein kinase Src RAF proto-oncogene serine/threonine-protein kinase Ras-related protein Rap-1b Serine/threonine-protein kinase B-raf Vinculin small monomeric GTPase small monomeric GTPase	A0A1D5PIZ8 A0A1D5PT95 A0A1D5PX90 F1NSA8 P00523 P05625 P08642 P11722 P12003 Q04982 Q5F352 Q5ZHX1 Q5ZIF0 Q5ZLQ6 Q92071	BRAF FN1 HRAS HRAS1 IQGAP3 ITGB3 KRAS KSR2 MIL NRAS RAF1 RAP1A RAP1B RCJMB04_27f19 RMIL SRC VCL VINC1 YWHAB	Gallus gallus (chicken)
Lysosomal oligosaccharide catabolism				Gallus gallus (chicken)	G00027MO G25577BM G28233ME G70323CJ G90333CG
Lewis blood group biosynthesis	Alpha-(1,3)-fucosyltransferase Fucosyltransferase Fucosyltransferase Hexosyltransferase Hexosyltransferase	E1BZG7 E1C2U3 E1C4T5 Q8UWB9 Q8UWC1	B3GALT1 B3GALT5 CFTII FUT10 FUT7 FUT9 cFuc-TIX	Gallus gallus (chicken)	G90387AM
Lectin-mediated initiation of complement cascade	MAp19 Mannan-binding lectin associated serine protease 2 Mannan-binding lectin associated serine protease 3 Mannose-binding protein	Q6Q1Q7 Q6Q1Q8 Q6Q1Q9 Q98TA4	MASP2 MBL	Gallus gallus (chicken)
Lectin pathway of complement activation	Collectin-10 Collectin-11 Mannose-binding protein	A0A3Q3A736 Q2LK95 Q98TA4	CL1 COLEC10 COLEC11 MBL	Gallus gallus (chicken)	G49108TO G57321FI
Lactose synthesis	Lysozyme C	P00698	LYZ	Gallus gallus (chicken)	G58161NS G74621DY
Keratan sulfate degradation	Beta-hexosaminidase Fibromodulin Keratocan Lumican Mimecan N-acetylglucosamine-6-sulfatase	A0A1D5NTY7 F1NI04 F1NTQ2 O42235 P51890 Q9W6H0	FMOD GNS HEXB KERA LDC LUM OGN	Gallus gallus (chicken)	G09546QO G20239CJ G27025MB G50451AA G80016QC G82768YB G85384LV
Keratan sulfate biosynthesis	Beta-1,4-galactosyltransferase Beta-1,4-galactosyltransferase CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1 Fibromodulin Hexosyltransferase Keratocan Lumican Mimecan Sulfotransferase	A0A1D5NTY7 A0A1D5NVT2 A0A1D5PSH8 A0A3S5ZPV4 O42235 P51890 Q11200 Q5ZK57 Q9W6H0	B3GNT2 B4GALT2 B4GALT6 CHST2 FMOD KERA LDC LUM OGN SIAT4A ST3GAL1	Gallus gallus (chicken)
Iron uptake and transport	Cullin 1 Cullin-associated NEDD8-dissociated protein 1 Cytoplasmic aconitate hydratase Ferritin heavy chain Iron-responsive element-binding protein 2 Plasma membrane ascorbate-dependent reductase CYBRD1 Polyubiquitin-B Proton-coupled folate transporter S-phase kinase-associated protein 1 Solute carrier family 40 member Ubiquitin B Ubiquitin-ribosomal protein eS31 fusion protein	A0A1D5P2L3 A0A1D5P546 A0A1D5PBJ1 A0A1D5PQ17 A0A1D5PQV0 F1NHL2 F1NJ67 P08267 P0CG62 P79781 Q5F3K3 Q5ZKF5	ACO1 CAND1 CUL1 CYBRD1 FTH IREB2 PCFT RPS27A SKP1 SKP1A SLC40A1 SLC46A1 UBA80 UBB	Gallus gallus (chicken)
Ion transport by P-type ATPases	Calcium-transporting ATPase Calcium-transporting ATPase Cardiac phospholamban FXYD domain-containing ion transport regulator PDZ domain-containing protein 11 Phospholipid-transporting ATPase Phospholipid-transporting ATPase Phospholipid-transporting ATPase Phospholipid-transporting ATPase Phospholipid-transporting ATPase Plasma membrane calcium-transporting ATPase 1 Sodium/potassium-transporting ATPase subunit alpha Sodium/potassium-transporting ATPase subunit beta-3 Sodium/potassium-transporting ATPase subunit beta calcium/calmodulin-dependent protein kinase	A0A1D5P8E2 A0A1L1RKB7 A0A3Q2U0I3 A0A3Q2U2N5 E1BX05 F1NGS8 F1NUR8 F1NZB7 F1P2K5 P33879 Q07420 Q5ZIK2 Q5ZM59 Q98SH2 R4GK80	ATP10B ATP12A ATP1B3 ATP2A2 ATP2B1 ATP2B2 ATP4B ATP8A1 ATP8A2 ATP9A ATP9B CAMK2A PDZD11 PDZK11 PLN PMCA1 RCJMB04_3a16	Gallus gallus (chicken)
Ion influx/efflux at host-pathogen interface	Natural resistance-associated macrophage protein 1 PDZ domain-containing protein 11	P51027 Q5ZIK2	NRAMP1 PDZD11 PDZK11 SLC11A1	Gallus gallus (chicken)
Ion homeostasis	ATP-sensitive inward rectifier potassium channel 11 Calcium-transporting ATPase Calcium-transporting ATPase Cardiac phospholamban FXYD domain-containing ion transport regulator Inositol 1,4,5-trisphosphate receptor Plasma membrane calcium-transporting ATPase 1 Short transient receptor potential channel 1 Sodium/calcium exchanger 1 Sodium/potassium-transporting ATPase subunit beta-3 Solute carrier family 8 member A2 Solute carrier family 8 member A3 Stromal interaction molecule 1 calcium/calmodulin-dependent protein kinase	A0A1D5NWP2 A0A1D5PZT6 A0A1L1RKB7 A0A3Q2U0I3 F1NBC9 F1NGS8 F1P023 F1P1X4 P33879 Q000J5 Q5ZM59 Q6DMS2 Q98SH2 R4GK80	ATP1B3 ATP2A2 ATP2B1 ATP2B2 CAMK2A COX16 ITPR2 KCNJ11 NCX1 PLN PMCA1 RCJMB04_3a16 SLC8A1 SLC8A2 STIM1 TRPC1	Gallus gallus (chicken)
Intrinsic Pathway of Fibrin Clot Formation	Coagulation factor X Glycoprotein IX platelet Glycoprotein Ib platelet subunit beta Prolylcarboxypeptidase Serpin family D member 1 Serpin family E member 2 Tsukushi	A0A1D5PLZ2 A0A1D5PVG8 A0A3Q3AXX7 E1BWU2 F1P1G3 P25155 Q65Z91	F10 FX GP1BB GP9 LRRC54 PRCP SERPIND1 SERPINE2 TSK TSKU	Gallus gallus (chicken)
Intestinal hexose absorption	Solute carrier family 2 member 5	F1NVV4	SLC2A5	Gallus gallus (chicken)	G58161NS G93924TT
Interleukin-20 family signaling	Interferon lambda receptor 1 Interferon lambda-3 Interleukin 22 receptor subunit alpha 1 Interleukin 22 Interleukin family protein Signal transducer and activator of transcription 3 Signal transducer and activator of transcription Signal transducer and activator of transcription Tyrosine-protein kinase Tyrosine-protein phosphatase non-receptor type 11	A0A1D5PNV3 B4ER10 E1BRV0 E1C1U2 E1C5G0 F1NMJ9 K9JA28 Q5ZJK3 Q6DV79 Q90687	IFNL IFNL3 IFNLR1 IL22 IL22RA1 IL28 IL28B IL28RA JAK1 LOC107055197 PTPN11 RCJMB04_17i9 STAT3 STAT4	Gallus gallus (chicken)
Interferon gamma signaling	Interferon gamma receptor 2 (interferon gamma transducer 1) Interferon gamma Protein kinase C delta type Signal transducer and activator of transcription Suppressor of cytokine signaling 1 Suppressor of cytokine signaling 3 Tyrosine-protein kinase calcium/calmodulin-dependent protein kinase	A0A1D5PS87 B6RCQ2 F1NGS8 F1NMJ9 F1P3G1 P49708 Q5ZJK3 R4GJH9	CAMK2A IFNG IFNGR2 JAK1 PRKCD RCJMB04_17i9 SOCS1 SOCS3	Gallus gallus (chicken)
Interferon alpha/beta signaling	ATP binding cassette subfamily E member 1 Interferon alpha Interferon type A1/A2 Interferon type B Interferon Karyopherin subunit beta 1 Polyubiquitin-B Signal transducer and activator of transcription Suppressor of cytokine signaling 1 Suppressor of cytokine signaling 3 Tyrosine-protein kinase Ubiquitin B Ubiquitin-ribosomal protein eS31 fusion protein	A0A1D5P1W7 A0A1D5P546 B0FLN7 B6RCQ2 F1NMJ9 P0CG62 P42165 P79781 Q5ZJK3 Q5ZJX6 Q90873 Q9PWI5 R4GJH9	ABCE1 IFN-gamma IFN2 IFNA IFNA1 IFNA2 IFNA3 IFNB JAK1 KPNB1 LOC100857947 LOC100858506 LOC100859414 LOC768614 RCJMB04_17i9 RPS27A SOCS1 SOCS3 UBA80 UBB	Gallus gallus (chicken)
Integrin signaling	3-phosphoinositide-dependent protein kinase 1 Fibronectin Focal adhesion kinase 1 Integrin beta Proto-oncogene tyrosine-protein kinase Src RAC-alpha serine/threonine-protein kinase RAS guanyl-releasing protein 1 Rap guanine nucleotide exchange factor 4 Ras-related protein Rap-1b SHC-transforming protein 1 Tyrosine-protein kinase SYK protein-tyrosine-phosphatase small monomeric GTPase	A0A1D5NYP8 A0A1D5PMC0 A0A1I7Q402 A0A3Q2U4X3 F1N9Y5 F1NSA8 P00523 P11722 Q00944 Q5F3U4 Q5F3V4 Q5ZHX1 Q92071	AKT1 FAK FAK1 FN1 ITGB3 PTK2 PTPN1 RAP1A RAP1B RAPGEF4 RCJMB04_6d2 RCJMB04_6p10 SHC1 SRC SYK	Gallus gallus (chicken)
Integrin cell surface interactions	Basigin Collagen type IV alpha 1 chain Fibronectin Integrin alpha-6 Integrin beta Integrin subunit alpha 4 Integrin subunit alpha 9 Leukocyte surface antigen CD47 Lumican	A0A1D5P8P3 A0A1D5PKL9 A0A1D5PQP8 P11722 P17790 P26007 P51890 Q6XFR1 Q92071	BSG CD47 COL4A1 FN1 ITGA4 ITGA6 ITGA9 ITGB3 LDC LUM	Gallus gallus (chicken)
Insulin receptor signalling cascade	Growth factor receptor bound protein 10 Growth factor receptor-bound protein 2 Insulin SHC-transforming protein 1 SOS Ras/Rac guanine nucleotide exchange factor 1 Tyrosine-protein kinase receptor	A0A1D5NYP8 A0A1D5P405 A0A1D5P6T3 A0A1D5PEZ2 A3R0S3 P67970	GRB10 GRB2 INS INSR SHC1 SOS1	Gallus gallus (chicken)
Insulin receptor recycling	ATPase H+ transporting V0 subunit b Cathepsin D H(+)-transporting two-sector ATPase Insulin Tyrosine-protein kinase receptor V-type proton ATPase proteolipid subunit V-type proton ATPase subunit G V-type proton ATPase subunit a V-type proton ATPase subunit a V-type proton ATPase subunit d 2 V-type proton ATPase subunit VATE1 ATPase Vacuolar proton pump subunit B protein-tyrosine-phosphatase	A0A1D5P5R9 A0A1D5P6L6 A0A1D5P6T3 A0A1D5PCU0 A0A1D5PP57 A0A1I7Q402 A0A1L1RUN2 F1NBW2 P67970 Q05744 Q5ZHL0 Q5ZJ19 Q5ZJC4 Q5ZKJ9	ATP6V0A1 ATP6V0A4 ATP6V0B ATP6V0C ATP6V0D2 ATP6V0E1 ATP6V1A ATP6V1B2 ATP6V1G3 CTSD INS INSR PTPN1 RCJMB04_10e23	Gallus gallus (chicken)

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