GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 201 - 225 of 263 in total
Pathway Name Protein Name ▼ UniProt ID Gene Symbol Organism GlyTouCan ID
EGFR downregulation
  • AREG
  • ARHGEF7
  • BTC
  • CDC42
  • EGFR
  • EPGN
  • EREG
  • GRB2
  • HBEGF
  • HEGFL
  • RCJMB04_1g20
  • RPS27A
  • SH3GL2
  • SH3GL3
  • SH3P4
  • SPRY1
  • UBA80
  • UBB
Gallus gallus (chicken)
Signaling by EGFR
  • AAMP
  • AREG
  • BTC
  • EGFR
  • EPGN
  • EREG
  • HBEGF
  • HEGFL
  • SRC
Gallus gallus (chicken)
RAF/MAP kinase cascade
  • ACTN2
  • ANGPT1
  • AREG
  • BTC
  • CAMK2A
  • CEK1
  • CEK2
  • CEK3
  • CSF2RA
  • DLG3
  • EGFR
  • EPGN
  • EREG
  • FAK
  • FAK1
  • FGF-18
  • FGF-3
  • FGF1
  • FGF10
  • FGF18
  • FGF19
  • FGF2
  • FGF23
  • FGF3
  • FGF4
  • FGF6
  • FGF7
  • FGF8
  • FGFR1
  • FGFR2
  • FGFR3
  • FGFR4
  • FRS2
  • FYN
  • Fgf16
  • Fgf7
  • GDNFRA
  • GFRA1
  • GRB2
  • GRIN1
  • GRIN2B
  • HBEGF
  • HEGFL
  • HRAS
  • HRAS1
  • IL5
  • IL5RA
  • KIT
  • KITLG
  • KRAS
  • LOC107049501
  • NRAS
  • NRG2
  • PDGF-A (L)
  • PDGFA
  • PIK3CB
  • PIK3R1
  • PIK3R2
  • PTK2
  • PTPRA
  • RASGEF1A
  • RASGRP3
  • RCJMB04_6d2
  • SCF
  • SHC1
  • SOS1
  • SPTBN1
  • TEK
Gallus gallus (chicken)
HS-GAG degradation
  • GPC1
  • GUSB
  • RCJMB04_31l23
  • SDC1
  • SDC2
  • SDC4
Gallus gallus (chicken)
CS/DS degradation
  • DCN
  • HEXB
  • RCJMB04_31l23
Gallus gallus (chicken)
Sialic acid metabolism
  • NANS
  • NEU2
  • RCJMB04_7b17
  • SIAT4A
  • SIAT7A
  • SIAT8C
  • ST3GAL1
  • ST6GAL2
  • ST6GALNAC1
  • ST6GALNAC5
  • ST8SIA4
  • ST8SIA5
  • ST8SIA6
  • Sial-T2
Gallus gallus (chicken)
N-Glycan antennae elongation
  • B4GALT2
  • B4GALT6
  • LOC427873
  • MGAT4A
  • MGAT5
  • SIAT8C
  • ST8SIA6
Gallus gallus (chicken)
Lewis blood group biosynthesis
  • B3GALT1
  • B3GALT5
  • CFTII
  • FUT10
  • FUT7
  • FUT9
  • cFuc-TIX
Gallus gallus (chicken)
Post-translational protein phosphorylation
  • ALB
  • APLP2
  • APOA1
  • BMP4
  • CCN1
  • CDH2
  • CG-1B
  • CST3
  • CYR61
  • DNAJC3
  • FGF23
  • FN1
  • FUCA2
  • HSP90B1
  • IGFBP5
  • IL6
  • MATN3
  • MFGE8
  • MGAT4A
  • MXRA8
  • PENK
  • PNPLA2
  • PRSS23
  • QSCN6
  • QSOX
  • QSOX1
  • RCJMB04_11h1
  • RCN1
  • SDC2
  • SERPIND1
  • SOX
  • STC2
Gallus gallus (chicken)
Regulation of IGF Activity by IGFBP
  • ALB
  • APLP2
  • APOA1
  • BMP4
  • CCN1
  • CDH2
  • CG-1B
  • CST3
  • CYR61
  • DNAJC3
  • FGF23
  • FN1
  • FUCA2
  • HSP90B1
  • IGF1
  • IGF2
  • IGFBP2
  • IGFBP5
  • IL6
  • MATN3
  • MFGE8
  • MGAT4A
  • MXRA8
  • PENK
  • PNPLA2
  • PRSS23
  • QSCN6
  • QSOX
  • QSOX1
  • RCJMB04_11h1
  • RCN1
  • SDC2
  • SERPIND1
  • SOX
  • STC2
Gallus gallus (chicken)
Surfactant metabolism
  • ADORA2B
  • ADRA2A
  • ADRA2C
  • GATA6
  • LL
  • LMCD1
  • SFTPA1
  • SLC34A1
  • SP-A
  • TTF1
Gallus gallus (chicken)
Adenosine P1 receptors
  • ADORA1
  • ADORA2B
Gallus gallus (chicken)
Transcriptional and post-translational regulation of MITF-M expression and activity
  • AIMP1
  • DARS
  • EPRS
  • KIT
  • KITLG
  • RPS6KA
  • RSK
  • SCF
  • WNT3A
  • XPO1
  • chPKCI
Gallus gallus (chicken)
p130Cas linkage to MAPK signaling for integrins
  • CRK
  • FAK
  • FAK1
  • FN1
  • ITGB3
  • PTK2
  • RAP1A
  • RAP1B
  • SRC
Gallus gallus (chicken)
VEGFA-VEGFR2 Pathway
  • BAIAP2
  • CDC42
  • CRK
  • CYFIP1
  • CYFIP2
  • ELMO2
  • FAK
  • FAK1
  • FYN
  • ITGB3
  • KDR
  • MAPK12
  • MAPK14
  • MAPKAPK2
  • MAPKAPK3
  • NCF4
  • NCK1
  • NCKAP1
  • PAK2
  • PIK3CB
  • PIK3R1
  • PIK3R2
  • PTK2
  • RCJMB04_7b13
  • RCJMB04_9e23
  • RHOA
  • SHB
  • SRC
  • VAV3
  • WASF3
  • cRac1A
  • cRhoA
  • rhoA
Gallus gallus (chicken)
Negative regulation of the PI3K/AKT network
  • AKT1
  • PHLPP1
  • THEM4
Gallus gallus (chicken)
Signaling by Activin
  • ACVR1C
  • ACVR2A
  • INHBB
  • LOC769000
  • MADH2
  • MADH3
  • SMAD3
  • TGFBR3
Gallus gallus (chicken)
Signaling by BMP
  • ACVR2A
  • BMP10
  • BMPR1A
  • BMPR1B
  • BRK-3
  • CER1
  • DSL1
  • GREM2
  • MADH5
  • SMAD1
  • SMAD5
  • SMAD6
  • SMAD7
  • TGFBR3
Gallus gallus (chicken)
B-WICH complex positively regulates rRNA expression
  • ACTB
  • DEK
  • H2A-IX
  • H2AF
  • H2AFX
  • H2AZ2
  • H2B-I
  • H2B-II
  • H2B-III
  • H2B-IV
  • H2B-V
  • H2B-VI
  • H2B-VII
  • H2B-VIII
  • H3-I
  • H3-II
  • H3-III
  • H3-IV
  • H3-IX
  • H3-V
  • H3-VI
  • H3-VII
  • H3-VIII
  • H3-X
  • H4-I
  • H4-II
  • H4-III
  • H4-IV
  • H4-V
  • H4-VI
  • H4-VII
  • HIST1H2B5L
  • LOC100859381
  • LOC426037
  • POLR1B
  • POLR2E
  • POLR2L
  • RPB6
  • SF3B1
  • TAF1B
  • TBP
Gallus gallus (chicken)
Stimuli-sensing channels
  • ACCN2
  • ANO10
  • ASIC1
  • BEST3
  • BEST4
  • CATSPER4
  • CLCN4
  • MIL
  • NALCN
  • OSTM1
  • RAF1
  • RCJMB04_16g8
  • RPS27A
  • SCNN1G
  • SGK
  • SGK1
  • SGK2
  • STOM
  • STOML3
  • UBA80
  • UBB
  • WWP1
Gallus gallus (chicken)
Glycosphingolipid catabolism
  • ASAH1
  • HEXB
  • LOC418658
  • M6PR
  • NEU2
  • SMPD2
Gallus gallus (chicken)
Arachidonate production from DAG
  • ABHD12
  • ABHD6
Gallus gallus (chicken)
Synthesis of PC
  • ABHD3
  • CEPT1
  • CHAT
  • CHKA
  • CHPT1
  • MFSD2A
  • NLS1
  • SLC44A5
Gallus gallus (chicken)
ROS and RNS production in phagocytes
  • ATP6V0A1
  • ATP6V0A4
  • ATP6V0B
  • ATP6V0C
  • ATP6V0D2
  • ATP6V0E1
  • ATP6V1A
  • ATP6V1B2
  • ATP6V1G3
  • NCF4
  • NOS2
  • NRAMP1
  • RCJMB04_10e23
  • RCJMB04_38b23
  • RCJMB04_9e23
  • SLC11A1
Gallus gallus (chicken)
Insulin receptor recycling
  • ATP6V0A1
  • ATP6V0A4
  • ATP6V0B
  • ATP6V0C
  • ATP6V0D2
  • ATP6V0E1
  • ATP6V1A
  • ATP6V1B2
  • ATP6V1G3
  • CTSD
  • INS
  • INSR
  • PTPN1
  • RCJMB04_10e23
Gallus gallus (chicken)

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024