GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **976 - 1000** of **1070** in total

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Pathway Name	Protein Name ▲	UniProt ID	Gene Symbol	Organism
Tight junction interactions	Junctional adhesion molecule A Par-6 family cell polarity regulator beta Par-6 family cell polarity regulator gamma Partitioning defective 3 homolog Partitioning defective 6 homolog alpha Protein kinase C iota type	D4A2F2 E9PT71 F1M7Y5 Q6B4M5 Q9JHY1 Q9Z340	F11r Jam1 Par-6a Par3 Par6a Pard3 Pard6a Pard6b Pard6g Pkcl Prkci	Rattus norvegicus (Norway rat)
Metal sequestration by antimicrobial proteins	Lactotransferrin Neutrophil gelatinase-associated lipocalin Protein S100-A8 Protein S100-A9	D3ZAB1 P30152 P50115 P50116	Lcn2 Ltf Mrp14 Mrp8 S100a8 S100a9	Rattus norvegicus (Norway rat)
Axonal growth inhibition (RHOA activation)	Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 MCF.2 cell line derived transforming sequence Myelin-associated glycoprotein Oligodendrocyte-myelin glycoprotein Reticulon-4 Rho GDP-dissociation inhibitor 1 Transforming protein RhoA Tumor necrosis factor receptor superfamily member 16	A0A8I6A9Q4 F7EYB9 G3V881 P07174 P07722 P61589 Q5XI73 Q9JK11	Arha Arha2 Arhgdia Lingo1 Mag Mcf2 Ngfr Nogo Omg Rhoa Rtn4 Tnfrsf16	Rattus norvegicus (Norway rat)
Transfer of LPS from LBP carrier to CD14	Lipopolysaccharide-binding protein Monocyte differentiation antigen CD14	Q63313 Q63691	Cd14 Lbp	Rattus norvegicus (Norway rat)
Beta oxidation of myristoyl-CoA to lauroyl-CoA	Long-chain specific acyl-CoA dehydrogenase, mitochondrial Trifunctional enzyme subunit alpha, mitochondrial Trifunctional enzyme subunit beta, mitochondrial	P15650 Q60587 Q64428	Acadl Hadha Hadhb	Rattus norvegicus (Norway rat)
MyD88-independent TLR4 cascade	Lymphocyte antigen 96 Monocyte differentiation antigen CD14 NAD(+) hydrolase SARM1 TIR domain containing adaptor molecule 2 TIR domain-containing adapter molecule 1 Toll-like receptor 4	D3ZUM2 D3ZXR7 M0RA08 Q56DL5 Q63691 Q9QX05	Cd14 Ly96 Plin3 Sarm1 Ticam1 Ticam2 Tlr4	Rattus norvegicus (Norway rat)
Lysosphingolipid and LPA receptors	Lysophosphatidic acid receptor 1 Lysophosphatidic acid receptor 2 Lysophosphatidic acid receptor 3 Lysophosphatidic acid receptor 5 Phospholipid phosphatase related 5 Phospholipid phosphatase-related protein type 1 Phospholipid phosphatase-related protein type 2 Phospholipid phosphatase-related protein type 3 Phospholipid phosphatase-related protein type 4 Sphingosine 1-phosphate receptor 1 Sphingosine 1-phosphate receptor 2 Sphingosine 1-phosphate receptor 5 Sphingosine-1-phosphate receptor 3 Sphingosine-1-phosphate receptor 4	A0A0G2K505 A0A8I5ZVX2 D4ADR1 D4AEH8 F1M9D3 P47752 P48303 P61794 Q6W5G4 Q6WAY2 Q7TMB0 Q7TMB7 Q8K5E0 Q9JKM5	Edg1 Edg2 Edg5 Edg7 Edg8 Gpcr91 Lpa1 Lpa3 Lpar1 Lpar2 Lpar3 Lpar5 Lppr1 Lppr2 Lppr3 Lppr4 Nrg1 Php1 Plppr1 Plppr2 Plppr3 Plppr4 Plppr5 Prg1 Prg2 Prg3 Prg4 S1pr1 S1pr2 S1pr3 S1pr4 S1pr5	Rattus norvegicus (Norway rat)
P2Y receptors	Lysophosphatidic acid receptor 4 Lysophosphatidic acid receptor 6 P2Y purinoceptor 12 P2Y purinoceptor 13 P2Y purinoceptor 14 P2Y purinoceptor 1 P2Y purinoceptor 2 P2Y purinoceptor 4 P2Y purinoceptor 6 P2Y receptor family member 10 Uracil nucleotide/cysteinyl leukotriene receptor	A0A8I5ZW42 D3ZHA3 O35811 O35881 P41232 P49651 Q09QM4 Q4G072 Q63371 Q6GUG4 Q9EPX4	Gpr105 Gpr17 Lpar4 Lpar6 P2ru1 P2ry1 P2ry10 P2ry12 P2ry13 P2ry14 P2ry2 P2ry4 P2ry5 P2ry6 P2y12 P2y4 P2y5	Rattus norvegicus (Norway rat)
Crosslinking of collagen fibrils	Lysyl oxidase homolog 2 Lysyl oxidase homolog Metalloendopeptidase Metalloendopeptidase Metalloendopeptidase Peroxidasin Procollagen C-endopeptidase enhancer 1 Protein-lysine 6-oxidase protein-lysine 6-oxidase protein-lysine 6-oxidase	A0A0G2JWB6 B5DF27 D3Z8U5 D3ZP82 D4A9V5 F1M280 F1M798 O08628 P16636 Q5FWS5	Bmp1 Lox Loxl1 Loxl2 Loxl3 Loxl4 Pcolce Pcpe1 Pxdn Tll1 Tll2	Rattus norvegicus (Norway rat)
Signaling by MST1	Macrophage stimulating 1 Serine peptidase inhibitor, Kunitz type 1 Serine peptidase inhibitor, Kunitz type, 2 Serine protease hepsin receptor protein-tyrosine kinase	A0A8I6A5T6 F7FMS0 G3V8S0 Q05511 Q4V8Q2	Hpn Mst1 Mst1r Spint1 Spint2	Rattus norvegicus (Norway rat)
ERK/MAPK targets	Mapk11 protein Mitogen-activated protein kinase 14 Mitogen-activated protein kinase 1 Mitogen-activated protein kinase 3 Mitogen-activated protein kinase 7 Protein phosphatase 2 scaffold subunit A alpha Ribosomal protein S6 kinase alpha-1 Ribosomal protein S6 kinase Ribosomal protein S6 kinase Ribosomal protein S6 kinase Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	A0A8I6A6K6 A0A8I6A7D1 A0A8I6AR08 A0A8I6AWJ2 D4A3U7 P0C865 P21708 P62716 P63086 P63331 P70618 Q4QQT4 Q5XI34 Q63531	Bmk1 Csbp1 Csbp2 Erk1 Erk2 Erk5 Mapk Mapk1 Mapk11 Mapk14 Mapk3 Mapk7 Mapkapk1a Ppp2ca Ppp2cb Ppp2r1a Ppp2r1b Ppp2r5d Prkm1 Prkm3 Rps6ka1 Rps6ka2 Rps6ka3 Rps6ka5 Rsk1	Rattus norvegicus (Norway rat)
Opsins	Medium-wave-sensitive opsin 1 Melanopsin Opsin 3 Opsin 5 Retinal G protein coupled receptor Retinal pigment epithelium derived rhodopsin homolog Rhodopsin Short-wave-sensitive opsin 1	A0A1W2Q6H2 A0A8J8YD44 D3ZFS1 D3ZG87 O35476 P51489 Q63652 Q8R456	Bcp Gcp Opn1mw Opn1sw Opn3 Opn4 Opn5 Rgr Rho Rrh	Rattus norvegicus (Norway rat)
Propionyl-CoA catabolism	Metabolism of cobalamin associated A Methylmalonyl CoA epimerase Methylmalonyl-CoA mutase, mitochondrial Propionyl-CoA carboxylase alpha chain, mitochondrial Propionyl-CoA carboxylase beta chain, mitochondrial	A0A8I5YC26 D3ZKG1 D3ZNY3 P07633 P14882	LOC100361295 Mcee Mmaa Mmut Mut Pcca Pccb	Rattus norvegicus (Norway rat)
Zinc influx into cells by the SLC39 gene family	Metal cation symporter ZIP14 Metal cation symporter ZIP8 Slc39a1 protein Solute carrier family 39 member 2 Zinc transporter ZIP3 Zinc transporter ZIP4 Zinc transporter ZIP6	A0A8I6ABU1 A0JPN2 B5DEF5 D3ZIN1 Q4V887 Q5FVQ0 Q5U1X7	Slc39a1 Slc39a14 Slc39a2 Slc39a3 Slc39a4 Slc39a6 Slc39a8 Zip3 Zip4 Zip6 Zip8	Rattus norvegicus (Norway rat)
LDL remodeling	Microsomal triglyceride transfer protein large subunit Protein disulfide-isomerase	D4A1W8 P04785	Mtp Mttp P4hb Pdia1	Rattus norvegicus (Norway rat)
MDK and PTN in ALK signaling	Midkine Pleiotrophin Receptor-type tyrosine-protein phosphatase zeta Tyrosine-protein kinase receptor	F1LRZ0 P63090 Q62656 Q9R1S9	Alk Mdk Ptn Ptprz Ptprz1 Ptpz	Rattus norvegicus (Norway rat)
Organic anion transporters	Mitochondrial 2-oxoglutarate/malate carrier protein Mitochondrial dicarboxylate carrier Mitochondrial glutamate carrier 1 Mitochondrial glutamate carrier 2 Sodium-coupled monocarboxylate transporter 1 Sodium-dependent phosphate transport protein 1 Sodium/iodide cotransporter Tricarboxylate transport protein, mitochondrial Vesicular glutamate transporter 1 Vesicular glutamate transporter 2 Vesicular glutamate transporter 3	A0A0G2K5L2 A0A8I6A218 O89035 P32089 P97700 Q505J6 Q62634 Q62795 Q63008 Q7TSF2 Q9JI12	Bnpi Dnpi Gc1 Nis Npt1 Slc17a1 Slc17a6 Slc17a7 Slc17a8 Slc20a3 Slc20a4 Slc25a1 Slc25a10 Slc25a11 Slc25a18 Slc25a22 Slc5a5 Slc5a8 Vglut1 Vglut2 Vglut3	Rattus norvegicus (Norway rat)
RHOT2 GTPase cycle	Mitochondrial Rho GTPase 2 Mitofusin-1 Mitofusin-2 Myosin XIX Trafficking kinesin protein 1 Trafficking kinesin-binding protein 2	A0A8I6AI05 D3Z8I9 Q7TSA0 Q8R2H7 Q8R4Z9 Q8R500	Als2cr3 Arht2 Fzo1a Fzo1b Grif1 Mfn1 Mfn2 Myo19 Oip98 Rhot2 Trak1 Trak2	Rattus norvegicus (Norway rat)
Transport of organic anions	Monocarboxylate transporter 8 Solute carrier organic anion transporter family member 1A4 Solute carrier organic anion transporter family member 1B2 Solute carrier organic anion transporter family member 1C1 Solute carrier organic anion transporter family member 2A1 Solute carrier organic anion transporter family member 2B1 Solute carrier organic anion transporter family member 3A1 Solute carrier organic anion transporter family member 4A1 Solute carrier organic anion transporter family member 4C1 Vasopressin-neurophysin 2-copeptin	O35913 P01186 Q00910 Q71MB6 Q8K1P8 Q99N01 Q99N02 Q9EPZ7 Q9JHI3 Q9QZX8	Avp Bsat1 Matr1 Mct8 Oatp1a4 Oatp1b2 Oatp1c1 Oatp2 Oatp2b1 Oatp3a1 Oatp4a1 Oatp4c1 Oatpd Oatpe Oatpf Pgt2 SLC16A2 Slc21a10 Slc21a11 Slc21a12 Slc21a14 Slc21a2 Slc21a20 Slc21a5 Slc21a9 Slco1a4 Slco1b2 Slco1c1 Slco2a1 Slco2b1 Slco3a1 Slco4a1 Slco4c1	Rattus norvegicus (Norway rat)
Opioid Signalling	Mu-type opioid receptor Pro-opiomelanocortin Proenkephalin-B	P01194 P06300 P33535	Oprm1 Pdyn Pomc Pomc2 Ror-b	Rattus norvegicus (Norway rat)
TRP channels	Mucolipin 2 Mucolipin TRP cation channel 1 Mucolipin TRP cation channel 3 Short transient receptor potential channel 1 Short transient receptor potential channel 3 Short transient receptor potential channel 4 Transient receptor potential cation channel subfamily A member 1 Transient receptor potential cation channel subfamily C member 5 Transient receptor potential cation channel subfamily M member 1 Transient receptor potential cation channel subfamily M member 2 Transient receptor potential cation channel subfamily M member 4 Transient receptor potential cation channel subfamily M member 7 Transient receptor potential cation channel subfamily M member 8 Transient receptor potential cation channel subfamily V member 1 Transient receptor potential cation channel subfamily V member 2 Transient receptor potential cation channel subfamily V member 4 Transient receptor potential cation channel subfamily V member 5 Transient receptor potential cation channel subfamily V member 6 Transient receptor potential cation channel, subfamily C, member 7 Transient receptor potential cation channel, subfamily M, member 3 Transient receptor potential cation channel, subfamily M, member 5 Transient receptor potential cation channel, subfamily V, member 3 non-specific serine/threonine protein kinase	A0A8I5ZXW7 A0A8I6ALW5 D3ZRF9 E9PTA2 E9PU00 F1LMD7 F1LQF7 F1M7G0 O35119 O35433 Q2WEA5 Q499S1 Q6RI86 Q8R455 Q8VD38 Q925B3 Q9ERZ8 Q9ESQ5 Q9JIP0 Q9JMI9 Q9QX01 Q9R186 Q9WUD2	Anktm1 Cat2 Cmr1 Ecac Ecac1 Ltrpc4 Mcoln1 Mcoln2 Mcoln3 Sac2b Trp1 Trpa1 Trpc1 Trpc3 Trpc4 Trpc5 Trpc7 Trpm1 Trpm2 Trpm3 Trpm4 Trpm5 Trpm6 Trpm7 Trpm8 Trpv1 Trpv2 Trpv3 Trpv4 Trpv5 Trpv6 Trrp3 Vr1 Vr1l Vrl1 Vroac	Rattus norvegicus (Norway rat)
Synthesis of IPs in the ER lumen	Multiple inositol polyphosphate phosphatase 1	O35217	Minpp1	Rattus norvegicus (Norway rat)
Muscarinic acetylcholine receptors	Muscarinic acetylcholine receptor M1 Muscarinic acetylcholine receptor M2 Muscarinic acetylcholine receptor M3 Muscarinic acetylcholine receptor M4 Muscarinic acetylcholine receptor M5	P08482 P08483 P08485 P08911 P10980	Chrm-1 Chrm-2 Chrm-3 Chrm-4 Chrm-5 Chrm1 Chrm2 Chrm3 Chrm4 Chrm5	Rattus norvegicus (Norway rat)
TFAP2 (AP-2) family regulates transcription of cell cycle factors	Myc proto-oncogene protein Transcription factor AP-2 gamma [histone H3]-trimethyl-L-lysine(4) demethylase	A0A0G2K3N6 F7EWS2 P09416	Kdm5b Myc Tfap2c	Rattus norvegicus (Norway rat)
Neurotransmitter release cycle	N-acylethanolamine-hydrolyzing acid amidase	Q5KTC7	Asahl Naaa	Rattus norvegicus (Norway rat)

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