GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **1 - 25** of **1070** in total

1

2

3

4

5

…

Next ›

Last »
Pathway Name	Protein Name ▼	UniProt ID	Gene Symbol	Organism	GlyTouCan ID
CREB1 phosphorylation through the activation of Adenylate Cyclase	cAMP-dependent protein kinase catalytic subunit alpha cAMP-dependent protein kinase catalytic subunit beta cAMP-dependent protein kinase type I-alpha regulatory subunit cAMP-dependent protein kinase type I-beta regulatory subunit cAMP-dependent protein kinase type II-alpha regulatory subunit cAMP-dependent protein kinase type II-beta regulatory subunit	P09456 P12368 P12369 P27791 P68182 P81377	Pkacb Prkaca Prkacb Prkar1a Prkar1b Prkar2a Prkar2b	Rattus norvegicus (Norway rat)
PKA activation in glucagon signalling	cAMP-dependent protein kinase catalytic subunit alpha cAMP-dependent protein kinase catalytic subunit beta cAMP-dependent protein kinase type I-alpha regulatory subunit cAMP-dependent protein kinase type I-beta regulatory subunit cAMP-dependent protein kinase type II-alpha regulatory subunit cAMP-dependent protein kinase type II-beta regulatory subunit	P09456 P12368 P12369 P27791 P68182 P81377	Pkacb Prkaca Prkacb Prkar1a Prkar1b Prkar2a Prkar2b	Rattus norvegicus (Norway rat)
Progressive trimming of alpha-1,2-linked mannose residues from Man9/8/7GlcNAc2 to produce Man5GlcNAc2	alpha-1,2-Mannosidase alpha-1,2-Mannosidase alpha-1,2-Mannosidase	A0A0G2JW29 D3Z979 D3ZR49	Man1a1 Man1a2 Man1c1	Rattus norvegicus (Norway rat)	G70323CJ
Presynaptic depolarization and calcium channel opening	Voltage-dependent L-type calcium channel subunit beta-1 Voltage-dependent L-type calcium channel subunit beta-2 Voltage-dependent L-type calcium channel subunit beta-3 Voltage-dependent L-type calcium channel subunit beta-4 Voltage-dependent N-type calcium channel subunit alpha-1B Voltage-dependent P/Q-type calcium channel subunit alpha-1A Voltage-dependent R-type calcium channel subunit alpha-1E Voltage-dependent calcium channel gamma-2 subunit Voltage-dependent calcium channel gamma-4 subunit Voltage-dependent calcium channel subunit alpha-2/delta-2 Voltage-dependent calcium channel subunit alpha-2/delta-3	D4A055 P54282 P54283 P54287 Q02294 Q07652 Q71RJ2 Q8CFG5 Q8CFG6 Q8VGC3 Q8VHW9	Cach4 Cach5 Cach6 Cacn3 Cacna1a Cacna1b Cacna1e Cacna2d2 Cacna2d3 Cacnb1 Cacnb2 Cacnb3 Cacnb4 Cacng2 Cacng4 Cacnl1a4 Cacnl1a5 Cacnl1a6 Cacnlb1 Cacnlb2 Cacnlb3 Stg	Rattus norvegicus (Norway rat)
Phase 0 - rapid depolarisation	Voltage-dependent L-type calcium channel subunit alpha-1C Voltage-dependent L-type calcium channel subunit beta-1 Voltage-dependent L-type calcium channel subunit beta-2 Voltage-dependent calcium channel gamma-4 subunit Voltage-dependent calcium channel gamma-6 subunit Voltage-dependent calcium channel gamma-7 subunit Voltage-dependent calcium channel gamma-8 subunit Voltage-dependent calcium channel subunit alpha-2/delta-2	P22002 P54283 P62957 Q8CFG6 Q8VGC3 Q8VHW5 Q8VHW7 Q8VHW9	Cach2 Cacn2 Cacna1c Cacna2d2 Cacnb1 Cacnb2 Cacng4 Cacng6 Cacng7 Cacng8 Cacnl1a1 Cacnlb1 Cacnlb2 Cchl1a1	Rattus norvegicus (Norway rat)
Beta oxidation of palmitoyl-CoA to myristoyl-CoA	Trifunctional enzyme subunit alpha, mitochondrial Trifunctional enzyme subunit beta, mitochondrial Very long-chain specific acyl-CoA dehydrogenase, mitochondrial	P45953 Q60587 Q64428	Acadvl Hadha Hadhb	Rattus norvegicus (Norway rat)
Regulation of CDH11 gene transcription	Transcription factor Sp1 Zinc finger E-box binding homeobox 2	E9PTC3 Q01714	Sp1 Zeb2	Rattus norvegicus (Norway rat)
Insulin effects increased synthesis of Xylulose-5-Phosphate	Transaldolase Transketolase	P50137 Q9EQS0	Taldo1 Tkt	Rattus norvegicus (Norway rat)
Toll Like Receptor 7/8 (TLR7/8) Cascade	Toll-like receptor 7	A0A8I6AM21	Tlr7	Rattus norvegicus (Norway rat)
Toll Like Receptor 10 (TLR10) Cascade	Toll-like receptor 10	A0A8I6AFM9	Tlr10	Rattus norvegicus (Norway rat)
PI Metabolism	TNF alpha induced protein 8 like 3 Tumor necrosis factor alpha-induced protein 8-like protein 1 Tumor necrosis factor alpha-induced protein 8-like protein 2 Tumor necrosis factor alpha-induced protein 8	A0A8I5ZY03 D4A9G3 F1LX20 Q6AYJ8	Tnfaip8 Tnfaip8l1 Tnfaip8l2 Tnfaip8l3	Rattus norvegicus (Norway rat)
Metabolism of steroid hormones	Steryl-sulfatase	P15589	Sts	Rattus norvegicus (Norway rat)
Neurotransmitter clearance	Solute carrier family 22 member 1 Solute carrier family 22 member 2	Q63089 Q9R0W2	Oct1 Oct2 Slc22a1 Slc22a2	Rattus norvegicus (Norway rat)
Abacavir transmembrane transport	Solute carrier family 22 member 1 Solute carrier family 22 member 2 Solute carrier family 22 member 3	O88446 Q63089 Q9R0W2	Oct1 Oct2 Oct3 Slc22a1 Slc22a2 Slc22a3	Rattus norvegicus (Norway rat)
Lactose synthesis	Solute carrier family 2, facilitated glucose transporter member 1	P11167	Glut1 Slc2a1	Rattus norvegicus (Norway rat)	G58161NS
Proton/oligopeptide cotransporters	Solute carrier family 15 member 1 Solute carrier family 15 member 2 Solute carrier family 15 member 3 Solute carrier family 15 member 4	O09014 P51574 Q63424 Q924V4	Pept1 Pept2 Pht1 Pht2 Slc15a1 Slc15a2 Slc15a3 Slc15a4	Rattus norvegicus (Norway rat)
Cation-coupled Chloride cotransporters	Solute carrier family 12 member 1 Solute carrier family 12 member 2 Solute carrier family 12 member 3 Solute carrier family 12 member 4 Solute carrier family 12 member 5 Solute carrier family 12 member 7 Solute carrier family 12, member 6	E9PTX9 G3V6N7 P55016 P55018 Q5RK27 Q63632 Q63633	Kcc1 Kcc2 Kcc4 Nkcc2 Slc12a1 Slc12a2 Slc12a3 Slc12a4 Slc12a5 Slc12a6 Slc12a7 Tsc	Rattus norvegicus (Norway rat)
Sodium/Proton exchangers	Sodium/hydrogen exchanger 1 Sodium/hydrogen exchanger 2 Sodium/hydrogen exchanger 3 Sodium/hydrogen exchanger 4 Sodium/hydrogen exchanger 5 Sodium/hydrogen exchanger 6 Sodium/hydrogen exchanger 8 Sodium/hydrogen exchanger 9 Sodium/hydrogen exchanger	D3ZCI2 D3ZJ86 D4A7H1 P26431 P26433 P26434 P48763 Q4L208 Q9Z0X2	Nhe1 Nhe2 Nhe3 Nhe4 Nhe5 Nhe8 Nhe9 Slc9a1 Slc9a2 Slc9a3 Slc9a4 Slc9a5 Slc9a6 Slc9a7 Slc9a8 Slc9a9	Rattus norvegicus (Norway rat)
Intestinal hexose absorption	Sodium/glucose cotransporter 1 Solute carrier family 2, facilitated glucose transporter member 2 Solute carrier family 2, facilitated glucose transporter member 5	P12336 P43427 P53790	Glut2 Glut5 Sglt1 Slc2a2 Slc2a5 Slc5a1	Rattus norvegicus (Norway rat)	G58161NS G93924TT
Clearance of seratonin	Sodium-dependent serotonin transporter	P31652	Slc6a4	Rattus norvegicus (Norway rat)
Sodium-coupled phosphate cotransporters	Sodium-dependent phosphate transporter 1 Sodium-dependent phosphate transporter 2	Q63488 Q9JJP0	Pit1 Pit2 Ram1 Slc20a1 Slc20a2	Rattus norvegicus (Norway rat)
Type II Na+/Pi cotransporters	Sodium-dependent phosphate transport protein 2A Sodium-dependent phosphate transport protein 2B Sodium-dependent phosphate transport protein 2C	Q06496 Q8K4R8 Q9JJ09	Slc17a2 Slc34a1 Slc34a2 Slc34a3	Rattus norvegicus (Norway rat)
Reuptake of GABA	Sodium- and chloride-dependent GABA transporter 1 Sodium- and chloride-dependent GABA transporter 2 Sodium- and chloride-dependent GABA transporter 3 Sodium- and chloride-dependent betaine transporter	P23978 P31646 P31647 P48056	Gabt1 Gabt2 Gabt3 Gat-1 Gat-2 Gat-3 Gat-b Gat1 Slc6a1 Slc6a11 Slc6a12 Slc6a13	Rattus norvegicus (Norway rat)
RUNX3 regulates YAP1-mediated transcription	Runt-related transcription factor TEA domain transcription factor 1 TEA domain transcription factor 2 Transcriptional coactivator YAP1 Transcriptional enhancer factor TEF-3 Transcriptional enhancer factor TEF-5	A0A0G2K2S9 A0A0G2K7T0 A0A8I5ZMT2 A0A8I6AIX9 A0A8I6GMF8 Q2EJA0	Runx3 Tead1 Tead2 Tead3 Tead4 Yap Yap1 Yap65	Rattus norvegicus (Norway rat)
PRPP biosynthesis	Ribose-phosphate pyrophosphokinase 1 Ribose-phosphate pyrophosphokinase 1 Ribose-phosphate pyrophosphokinase 2 Ribose-phosphate pyrophosphokinase N-terminal domain-containing protein ribose-phosphate diphosphokinase	A0A0G2JSV3 A0A8I6AC83 M0RBK1 P09330 P60892	ENSRNOG00000063771 LOC314140 Prps1 Prps1l1 Prps1l3 Prps2	Rattus norvegicus (Norway rat)

Download data in CSV format Download data in TSV format Download data in JSON format

Table Filtering

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

All Resources

Other Information

Tools

Search Tools

International Collaboration

Acknowledgements