GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **126 - 150** of **250** in total

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Pathway Name	Protein Name	UniProt ID ▲	Gene Symbol	Organism
Association of TriC/CCT with target proteins during biosynthesis	Sphingoid long chain base kinase 5 T-complex protein 1 subunit alpha T-complex protein 1 subunit beta T-complex protein 1 subunit delta T-complex protein 1 subunit epsilon T-complex protein 1 subunit eta T-complex protein 1 subunit gamma T-complex protein 1 subunit theta T-complex protein 1 subunit zeta	P12612 P39076 P39077 P39078 P39079 P40413 P42943 P47079 Q06147	ANC2 BIN2 BIN3 CCT1 CCT2 CCT3 CCT4 CCT5 CCT6 CCT7 CCT8 LCB5 TCP1 TCP2 TCP20 TCP3 TCP4 TCP5 TCP6	Saccharomyces cerevisiae (brewer's yeast)
DNA Damage/Telomere Stress Induced Senescence	DNA repair protein RAD50 Double-strand break repair protein MRE11 Histone acetyltransferase ESA1 Serine/threonine-protein kinase TEL1	P12753 P32829 P38110 Q08649	ESA1 MRE11 RAD50 TEL1	Saccharomyces cerevisiae (brewer's yeast)
Sensing of DNA Double Strand Breaks	DNA repair protein RAD50 Double-strand break repair protein MRE11 Histone acetyltransferase ESA1 Serine/threonine-protein kinase TEL1	P12753 P32829 P38110 Q08649	ESA1 MRE11 RAD50 TEL1	Saccharomyces cerevisiae (brewer's yeast)
SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription	Kexin	P13134	KEX2 QDS1	Saccharomyces cerevisiae (brewer's yeast)
Beta-oxidation of pristanoyl-CoA	Acyl-coenzyme A oxidase Peroxisomal acyl-coenzyme A thioester hydrolase 1	P13711 P41903	FOX1 POX1 PTE1 TES1	Saccharomyces cerevisiae (brewer's yeast)
SUMOylation of transcription cofactors	ATP-dependent RNA helicase DBP2 Chromatin modification-related protein YNG2 Dual specificity protein kinase YAK1 Protein YNG1 SUMO-conjugating enzyme UBC9 Transcriptional regulatory protein PHO23 Ubiquitin-like protein SMT3	P14680 P24783 P38806 P50623 P50947 Q08465 Q12306	DBP2 EAF4 NBN1 PHO23 SMT3 UBC9 YAK1 YNG1 YNG2	Saccharomyces cerevisiae (brewer's yeast)
Recycling pathway of L1	AP-1 complex subunit beta-1 AP-2 complex subunit alpha AP-2 complex subunit beta AP-2 complex subunit mu AP-2 complex subunit sigma Clathrin heavy chain Clathrin light chain Mitogen-activated protein kinase FUS3 Mitogen-activated protein kinase KSS1 Mitogen-activated protein kinase SLT2/MPK1 Sporulation-specific mitogen-activated protein kinase SMK1	P14681 P16892 P17891 P22137 P27351 P36000 P38065 P41808 Q00381 Q00772 Q99186	AMP1 APL1 APL2 APL3 APM4 APS2 CHC1 CLC1 DAC2 FUS3 KSS1 MPK1 SLT2 SMK1 YAP17 YAP80	Saccharomyces cerevisiae (brewer's yeast)
Transcriptional and post-translational regulation of MITF-M expression and activity	Exportin-1 Mitogen-activated protein kinase FUS3 Mitogen-activated protein kinase KSS1 Mitogen-activated protein kinase SLT2/MPK1 Protein kinase MCK1 Retrograde regulation protein 3 Serine/threonine-protein kinase MRK1 Serine/threonine-protein kinase RIM11/MSD1 Serine/threonine-protein kinase YPK3 Sporulation-specific mitogen-activated protein kinase SMK1	P14681 P16892 P21965 P30822 P38070 P38165 P38615 P41808 P50873 Q00772	CRM1 DAC2 FUS3 GSK3 KAP124 KSS1 MCK1 MDS1 MPK1 MRK1 RIM11 RTG3 SLT2 SMK1 XPO1 YPK1 YPK3	Saccharomyces cerevisiae (brewer's yeast)
ERK/MAPK targets	Mitogen-activated protein kinase FUS3 Mitogen-activated protein kinase HOG1 Mitogen-activated protein kinase KSS1 Mitogen-activated protein kinase SLT2/MPK1 Protein phosphatase PP2A regulatory subunit A Serine/threonine-protein kinase YPK3 Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform Serine/threonine-protein phosphatase PP2A-1 catalytic subunit Sporulation-specific mitogen-activated protein kinase SMK1	P14681 P16892 P23594 P31383 P32485 P38070 P38903 P41808 Q00772	DAC2 FUS3 HOG1 KSS1 MPK1 PPH21 RTS1 SCS1 SLT2 SMK1 SSK3 TPD3 YPK3	Saccharomyces cerevisiae (brewer's yeast)
ERKs are inactivated	Mitogen-activated protein kinase FUS3 Mitogen-activated protein kinase KSS1 Mitogen-activated protein kinase SLT2/MPK1 Protein phosphatase PP2A regulatory subunit A Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform Serine/threonine-protein phosphatase PP2A-1 catalytic subunit Sporulation-specific mitogen-activated protein kinase SMK1	P14681 P16892 P23594 P31383 P38903 P41808 Q00772	DAC2 FUS3 KSS1 MPK1 PPH21 RTS1 SCS1 SLT2 SMK1 TPD3	Saccharomyces cerevisiae (brewer's yeast)
Negative regulation of MAPK pathway	Mitogen-activated protein kinase FUS3 Mitogen-activated protein kinase KSS1 Mitogen-activated protein kinase SLT2/MPK1 Sporulation-specific mitogen-activated protein kinase SMK1 Tyrosine-protein phosphatase 1 Tyrosine-protein phosphatase 2 Tyrosine-protein phosphatase 3	P14681 P16892 P25044 P29461 P40048 P41808 Q00772	DAC2 FUS3 KSS1 MPK1 PTP1 PTP2 PTP3 SLT2 SMK1	Saccharomyces cerevisiae (brewer's yeast)
phospho-PLA2 pathway	Lysophospholipase 1 Lysophospholipase 2 Lysophospholipase 3 Mitogen-activated protein kinase FUS3 Mitogen-activated protein kinase KSS1 Mitogen-activated protein kinase SLT2/MPK1 Putative meiotic phospholipase SPO1 Sporulation-specific mitogen-activated protein kinase SMK1	P14681 P16892 P39105 P41808 P53541 Q00772 Q03674 Q08108	DAC2 FUS3 KSS1 MPK1 PLB1 PLB2 PLB3 SLT2 SMK1 SPO1	Saccharomyces cerevisiae (brewer's yeast)
RAF/MAP kinase cascade	Mitogen-activated protein kinase FUS3 Mitogen-activated protein kinase KSS1 Mitogen-activated protein kinase SLT2/MPK1 Sporulation-specific mitogen-activated protein kinase SMK1	P14681 P16892 P41808 Q00772	DAC2 FUS3 KSS1 MPK1 SLT2 SMK1	Saccharomyces cerevisiae (brewer's yeast)
RAF-independent MAPK1/3 activation	Mitogen-activated protein kinase FUS3 Mitogen-activated protein kinase KSS1 Mitogen-activated protein kinase SLT2/MPK1 Sporulation-specific mitogen-activated protein kinase SMK1	P14681 P16892 P41808 Q00772	DAC2 FUS3 KSS1 MPK1 SLT2 SMK1	Saccharomyces cerevisiae (brewer's yeast)
SUMOylation of transcription factors	DNA repair protein RAD9 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ2 Fork head protein homolog 1 Forkhead transcription factor HCM1 Retrograde regulation protein 3 SUMO-conjugating enzyme UBC9 Transcriptional regulator CRZ1 Ubiquitin-like protein SMT3	P14737 P25364 P38165 P40466 P50623 P53968 Q04195 Q12216 Q12306	CRZ1 FKH1 HAL8 HCM1 NFI1 RAD9 RTG3 SIZ1 SIZ2 SMT3 TCN1 UBC9 ULL1	Saccharomyces cerevisiae (brewer's yeast)
Transport of Mature mRNA derived from an Intron-Containing Transcript	ATP-dependent RNA helicase FAL1 Nonsense-mediated mRNA decay protein 3 Nuclear cap-binding protein complex subunit 1 Nuclear cap-binding protein subunit 2 Nucleoporin ASM4 Nucleoporin NDC1 Nucleoporin NIC96 Nucleoporin NSP1 Nucleoporin NUP116/NSP116 Nucleoporin NUP120 Nucleoporin NUP133 Nucleoporin NUP170 Nucleoporin NUP188 Nucleoporin NUP192 Nucleoporin NUP1 Nucleoporin NUP2 Nucleoporin NUP42 Nucleoporin NUP57 Nucleoporin NUP82 Nucleoporin NUP84 Nucleoporin NUP85 Nucleoporin SEH1 Protein MLP1 Protein transport protein SEC13 RNA annealing protein YRA1 Ran-specific GTPase-activating protein 1 Ran-specific GTPase-activating protein 2 Uncharacterized protein JIP4 mRNA export factor GLE1 mRNA export factor GLE2 mRNA export factor MEX67 mRNA transport regulator MTR2	P14907 P20676 P32499 P32500 P34077 P34160 P34232 P35729 P36161 P38181 P40066 P40368 P40517 P41920 P46673 P47054 P48412 P48837 P49686 P52593 P52891 P53011 Q02455 Q02630 Q03361 Q04491 Q05166 Q08920 Q12099 Q12159 Q12315 Q99257	ANU3 ASM4 BRR3 CBC1 CBC2 CBP20 CBP80 CST20 FAL1 GCR3 GLE1 GLE2 HTN1 JIP4 MEX67 MLP1 MTR2 MUD13 NDC1 NIC96 NLE3 NSP1 NSP116 NUP1 NUP116 NUP120 NUP133 NUP170 NUP188 NUP192 NUP2 NUP42 NUP57 NUP59 NUP82 NUP84 NUP85 RAE1 RAT2 RAT3 RAT9 RIP1 RSS1 SAE1 SEC13 SEH1 SFO1 STO1 SUA6 SUT1 UIP1 UPF3 YRA1 YRB1 YRB2	Saccharomyces cerevisiae (brewer's yeast)
SUMOylation of RNA binding proteins	Nuclear polyadenylated RNA-binding protein 3 Nucleolar protein 58 Nucleoporin ASM4 Nucleoporin NDC1 Nucleoporin NIC96 Nucleoporin NSP1 Nucleoporin NUP116/NSP116 Nucleoporin NUP120 Nucleoporin NUP133 Nucleoporin NUP170 Nucleoporin NUP188 Nucleoporin NUP192 Nucleoporin NUP1 Nucleoporin NUP2 Nucleoporin NUP42 Nucleoporin NUP57 Nucleoporin NUP82 Nucleoporin NUP84 Nucleoporin NUP85 Nucleoporin SEH1 Protein MLP1 Protein transport protein SEC13 Ran-specific GTPase-activating protein 1 Ran-specific GTPase-activating protein 2 SUMO-conjugating enzyme UBC9 Ubiquitin-like protein SMT3 mRNA export factor GLE2	P14907 P20676 P32499 P32500 P34077 P35729 P36161 P38181 P38996 P40066 P40368 P40517 P41920 P46673 P47054 P48837 P49686 P50623 P52593 P52891 P53011 Q02455 Q02630 Q04491 Q05166 Q12306 Q12499	ANU3 ASM4 CST20 GLE2 HMD1 HTN1 MLP1 NAB3 NDC1 NIC96 NLE3 NOP5 NOP58 NSP1 NSP116 NUP1 NUP116 NUP120 NUP133 NUP170 NUP188 NUP192 NUP2 NUP42 NUP57 NUP59 NUP82 NUP84 NUP85 RAE1 RAT2 RAT3 RAT9 RIP1 SEC13 SEH1 SFO1 SMT3 UBC9 UIP1 YRB1 YRB2	Saccharomyces cerevisiae (brewer's yeast)
SUMOylation of SUMOylation proteins	E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ2 Nucleoporin ASM4 Nucleoporin NDC1 Nucleoporin NIC96 Nucleoporin NSP1 Nucleoporin NUP116/NSP116 Nucleoporin NUP120 Nucleoporin NUP133 Nucleoporin NUP170 Nucleoporin NUP188 Nucleoporin NUP192 Nucleoporin NUP1 Nucleoporin NUP2 Nucleoporin NUP42 Nucleoporin NUP57 Nucleoporin NUP82 Nucleoporin NUP84 Nucleoporin NUP85 Nucleoporin SEH1 Protein MLP1 Protein transport protein SEC13 Ran-specific GTPase-activating protein 1 Ran-specific GTPase-activating protein 2 SUMO-conjugating enzyme UBC9 Ubiquitin-like protein SMT3 mRNA export factor GLE2	P14907 P20676 P32499 P32500 P34077 P35729 P36161 P38181 P40066 P40368 P40517 P41920 P46673 P47054 P48837 P49686 P50623 P52593 P52891 P53011 Q02455 Q02630 Q04195 Q04491 Q05166 Q12216 Q12306	ANU3 ASM4 CST20 GLE2 HTN1 MLP1 NDC1 NFI1 NIC96 NLE3 NSP1 NSP116 NUP1 NUP116 NUP120 NUP133 NUP170 NUP188 NUP192 NUP2 NUP42 NUP57 NUP59 NUP82 NUP84 NUP85 RAE1 RAT2 RAT3 RAT9 RIP1 SEC13 SEH1 SFO1 SIZ1 SIZ2 SMT3 UBC9 UIP1 ULL1 YRB1 YRB2	Saccharomyces cerevisiae (brewer's yeast)
HDMs demethylate histones	DNA damage-responsive transcriptional repressor RPH1 General transcriptional corepressor CYC8 Histone H3-like centromeric protein CSE4 Histone demethylase JHD2 Polyamine oxidase FMS1 Transcriptional activator/repressor GIS1	P14922 P36012 P39956 P47156 P50264 Q03833	CRT8 CSE4 CSL2 CYC8 FMS1 GIS1 JHD2 RPH1 SSN6	Saccharomyces cerevisiae (brewer's yeast)
Retrograde transport at the Trans-Golgi-Network	ADP-ribosylation factor-like protein 1 ADP-ribosylation factor-like protein 3 Alpha-soluble NSF attachment protein GTP-binding protein YPT6 Golgin IMH1 Guanine nucleotide exchange factor subunit RGP1 Guanine nucleotide exchange factor subunit RIC1 Protein SGM1 Protein SYS1 Syntaxin-8 Vacuolar morphogenesis protein 7 Vesicular-fusion protein SEC18 t-SNARE VTI1 t-SNARE affecting a late Golgi compartment protein 1 t-SNARE affecting a late Golgi compartment protein 2	P16664 P18759 P31377 P32602 P32912 P38116 P40395 P41544 P47166 Q02804 Q03322 Q04338 Q06704 Q08144 Q99260	ARF3 ARL1 ARL3 ARP1 IMH1 RGP1 RIC1 SEC17 SEC18 SGM1 SYN8 SYS1 SYS3 TLG1 TLG2 UIP2 VAM7 VTI1 YPT6	Saccharomyces cerevisiae (brewer's yeast)
Miscellaneous transport and binding events	Cystine transporter Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST6 Mitochondrial inner membrane magnesium transporter MFM1 Vacuolar arginine/histidine antiporter YPQ2 Vacuolar histidine transporter YPQ3 Vacuolar lysine transporter YPQ1	P17261 P38279 P48439 Q02783 Q03723 Q06328 Q12010	ERS1 LPE10 MFM1 OST3 OST6 RTC2 YPQ1 YPQ2 YPQ3	Saccharomyces cerevisiae (brewer's yeast)
Transport of inorganic cations/anions and amino acids/oligopeptides	Cystine transporter Putative mitochondrial carrier protein PET8 Vacuolar amino acid transporter 1	P17261 P38921 P47082	AVT1 ERS1 PET8	Saccharomyces cerevisiae (brewer's yeast)
RHOV GTPase cycle	Cell division control protein 42 Clathrin heavy chain GTP-binding protein RHO5 GTPase-activating protein BEM2/IPL2 GTPase-activating protein BEM3 RHO GTPase-activating protein RGD1 Ras GTPase-activating-like protein IQG1 Rho-type GTPase-activating protein 1 Rho-type GTPase-activating protein 2 Serine/threonine-protein kinase CLA4 Serine/threonine-protein kinase SKM1 Serine/threonine-protein kinase STE20 Tropomyosin-1 Uncharacterized protein YHR182W [PSI+] inducibility protein 3 tRNA (34-2'-O)-methyltransferase regulator RTT10	P17536 P19073 P22137 P32873 P38339 P38870 P39083 P39960 P48562 P53879 Q03497 Q06407 Q06449 Q08924 Q12280 Q12469	BEM2 BEM3 CDC42 CHC1 CLA4 CYK1 DBM1 ERE2 IPL2 IQG1 LSB2 PIN3 RGA1 RGA2 RGD1 RHO5 RTT10 SKM1 SRO2 STE20 SUP9 THE1 TPM1 TRM734 YHR182W	Saccharomyces cerevisiae (brewer's yeast)
Clathrin-mediated endocytosis	AP-1 complex subunit beta-1 AP-2 complex subunit alpha AP-2 complex subunit beta AP-2 complex subunit mu AP-2 complex subunit sigma Actin cytoskeleton-regulatory complex protein END3 Actin cytoskeleton-regulatory complex protein PAN1 Clathrin heavy chain Clathrin light chain Cytokinesis protein 2 EH domain-containing and endocytosis protein 1 Increased rDNA silencing protein 4 Phosphatidylinositol 4-phosphate 5-kinase MSS4 Rho-GTPase-activating protein RGD2 Suppressor of yeast profilin deletion	P17891 P22137 P25623 P27351 P32521 P34216 P36000 P36115 P38065 P38994 P39013 P43556 Q00381 Q05080 Q99186	AMP1 APL1 APL2 APL3 APM4 APS2 BUD15 CHC1 CLC1 CYK2 DIM2 EDE1 END3 HOF1 IRS4 MDP3 MIP3 MSS4 PAN1 RGD2 SYP1 YAP17 YAP80	Saccharomyces cerevisiae (brewer's yeast)
Synthesis of PE	Choline kinase Choline/ethanolaminephosphotransferase 1 Cholinephosphotransferase 1 Ethanolamine kinase Ethanolamine-phosphate cytidylyltransferase Phosphatidic acid phosphohydrolase 1	P17898 P20485 P22140 P32567 P33412 Q03764	CKI CKI1 CPT1 ECT1 EKI1 EPT1 MUQ1 PAH1 PAP1 SMP2	Saccharomyces cerevisiae (brewer's yeast)

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