GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 1 - 25 of 88 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
Synthesis of Dolichyl-phosphate
  • SPAC4D7.04c
  • SPAC7D4.09c
  • mvd1
  • nus1
  • pdf1
  • sec59
  • yhc1
Schizosaccharomyces pombe (fission yeast)
Acyl chain remodelling of PE
  • SPAC1786.02
  • SPAC1A6.03c
  • SPAC6G10.03c
  • SPAC977.09c
  • SPBC1348.10c
  • SPCC1450.09c
  • ale1
  • lpt1
  • plb1
Schizosaccharomyces pombe (fission yeast)
Transport of the SLBP independent Mature mRNA
  • SPAC1A6.02
  • SPAC4F10.18
  • SPAC890.06
  • SPBC106.12c
  • amo1
  • caf1
  • cbc1
  • cbc2
  • cut11
  • hba1
  • mex67
  • mug87
  • ndc1
  • nsp1
  • nup107
  • nup120
  • nup124
  • nup131
  • nup133a
  • nup146
  • nup184
  • nup186
  • nup189
  • nup211
  • nup40
  • nup44
  • nup45
  • nup61
  • nup82
  • nup85
  • nup96
  • nup98
  • rae1
  • sbp1
  • sec13
  • seh1
  • tif1
  • tif45
  • tif451
  • tif452
  • yrb1
Schizosaccharomyces pombe (fission yeast)
Digestion of dietary lipid
  • SPBC14C8.15
  • SPBC16A3.12c
  • SPCC1672.09
Schizosaccharomyces pombe (fission yeast)
Glycogen breakdown (glycogenolysis)
  • SPAC1039.11c
  • SPAC30D11.01c
  • SPAC5H10.12c
  • SPBC32F12.10
  • SPBC4C3.09
  • agl
  • agl1
  • mug136
Schizosaccharomyces pombe (fission yeast)
Transport of bile salts and organic acids, metal ions and amine compounds
  • SPAC11D3.06
  • SPAC323.07c
  • SPCC4B3.13
Schizosaccharomyces pombe (fission yeast)
Invadopodia formation
  • mde10
  • mug139
  • ral3
  • scd2
Schizosaccharomyces pombe (fission yeast)
Glutathione synthesis and recycling
  • SPAC11D3.15
  • SPBC31F10.03
  • SPCC737.06c
  • dug1
  • gcs1
  • ggt1
  • ggt2
  • gsa1
  • gsh2
Schizosaccharomyces pombe (fission yeast)
Platelet homeostasis
  • plg7
Schizosaccharomyces pombe (fission yeast)
Postmitotic nuclear pore complex (NPC) reformation
  • SPAC1A6.02
  • SPAC4F10.18
  • SPAC890.06
  • cut11
  • dcd1
  • hus5
  • mug87
  • ndc1
  • nup107
  • nup120
  • nup124
  • nup131
  • nup133a
  • nup146
  • nup184
  • nup186
  • nup189
  • nup40
  • nup85
  • nup96
  • nup98
  • pim1
  • pmt3
  • ptr2
  • rna1
  • sec13
  • seh1
  • smt3
  • spi1
  • ubc9
  • ubl2
Schizosaccharomyces pombe (fission yeast)
Acyl chain remodelling of PC
  • SPAC1786.02
  • SPAC1A6.03c
  • SPAC977.09c
  • SPBC1348.10c
  • SPCC1450.09c
  • ale1
  • lpt1
  • plb1
Schizosaccharomyces pombe (fission yeast)
Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
  • alg1
  • alg12
  • alg13
  • alg14
  • alg2
  • alg3
  • alg6
  • alg8
  • alg9
  • gpt
  • gpt2
Schizosaccharomyces pombe (fission yeast)
Acyl chain remodelling of PI
  • SPAC1786.02
  • SPAC1A6.03c
  • SPAC977.09c
  • SPBC1348.10c
  • SPCC1450.09c
  • ale1
  • lpt1
  • plb1
Schizosaccharomyces pombe (fission yeast)
Keratan sulfate degradation
Schizosaccharomyces pombe (fission yeast)
Hedgehog ligand biogenesis
  • SPBC28F2.08c
  • SPBC365.08c
  • cdc48
  • hrd1
  • ubi4
  • yos9
Schizosaccharomyces pombe (fission yeast)
Synthesis of bile acids and bile salts
  • SPBC2F12.05c
  • erg25
  • obp1
  • osh3
Schizosaccharomyces pombe (fission yeast)
APAP ADME
  • abc1
  • abc2
  • abc3
  • abc4
  • dug1
  • ggt1
  • ggt2
Schizosaccharomyces pombe (fission yeast)
G alpha (i) signalling events
  • gpa2
  • rgs1
Schizosaccharomyces pombe (fission yeast)
Mitochondrial ABC transporters
  • atm1
  • hmt1
  • mdl1
  • pmd1
Schizosaccharomyces pombe (fission yeast)
Acyl chain remodelling of PG
  • SPAC1786.02
  • SPAC1A6.03c
  • SPAC977.09c
  • SPBC1348.10c
  • SPBC428.14
  • SPCC1450.09c
  • crd1
  • plb1
Schizosaccharomyces pombe (fission yeast)
Clathrin-mediated endocytosis
  • SPAC1687.09
  • SPAC9G1.10c
  • SPBC19C2.10
  • SPBC530.09c
  • SPBC800.10c
  • SPCC18.02
  • act2
  • apl1
  • apl2
  • apl3
  • apm4
  • aps2
  • arc1
  • arc16
  • arc2
  • arc21
  • arc3
  • arc34
  • arc4
  • arc5
  • arp2
  • arp20
  • bzz1
  • cdc15
  • chc1
  • clc1
  • end3
  • end4
  • imp2
  • its3
  • pan1
  • rga8
  • rga9
  • sla1
  • sla2
  • sop2
  • ssa1
  • ssa2
  • syj1
  • syj2
  • syp1
  • ucp7
  • ucp8
Schizosaccharomyces pombe (fission yeast)
Lysine catabolism
  • SPAC56E4.03
  • SPAP11E10.01
  • SPBC1773.13
  • SPCC569.07
  • fap2
  • lys9
Schizosaccharomyces pombe (fission yeast)
Galactose catabolism
  • SPBC32F12.10
  • gal10
Schizosaccharomyces pombe (fission yeast)
ADP signalling through P2Y purinoceptor 1
  • SPAC1786.02
  • SPAC1A6.03c
  • SPAC977.09c
  • SPBC1348.10c
  • SPCC1450.09c
  • gpa1
  • hog1
  • phh1
  • plb1
  • spc1
  • sty1
Schizosaccharomyces pombe (fission yeast)
Phosphate bond hydrolysis by NTPDase proteins
  • gdp1
  • ynd1
Schizosaccharomyces pombe (fission yeast)

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Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024