Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
rhodopsin
Summary
- Gene Symbol
-
- RHO
- Organism
- Loxodonta africana (African savanna elephant)
Annotation
- Keyword
-
- Acetylation
- Cell projection
- Disulfide bond
- G-protein coupled receptor
- Glycoprotein
- Metal-binding
- Palmitate
- Phosphoprotein
- Reference proteome
- Retinal protein
- Transmembrane helix
- Vision
- Zinc
- Proteins
| UniProt | Protein Name |
|---|---|
| Q68J47 |
|
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| rhodopsin mediated signaling pathway |
|
|
| cellular response to light stimulus | ||
| absorption of visible light |
|
|
| phototransduction | ||
| visual perception |
| GO Term | Evidence Code | PMID |
|---|---|---|
| photoreceptor outer segment membrane |
|
|
| membrane |
|
|
| plasma membrane | ||
| photoreceptor inner segment membrane |
|
|
| photoreceptor outer segment |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| 11-cis retinal binding |
|
|
| metal ion binding |
|
|
| G protein-coupled photoreceptor activity |
GO Hierarchy
OrthoDB (Group)
- Group level
- Eukaryota
- Group Name
- green-sensitive opsin
- Functional Category
-
- G: Carbohydrate transport and metabolism
- O: Posttranslational modification, protein turnover, chaperones
- T: Signal transduction mechanisms
| Gene Ontology |
|---|
| cellular response to light stimulus |
| metal ion binding |
| photoreceptor activity |
| phototransduction |
| visual perception |
| InterPro |
|---|
| G protein-coupled receptor, rhodopsin-like |
| GPCR, rhodopsin-like, 7TM |
| Opsin |
| Rhodopsin, N-terminal |
| Rhodopsin |
| Visual pigments (opsins) retinal binding site |
Ortholog
| Species | Gene ID | OrthoDB | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|---|
| 103176745 | CALMI10786 | |||
| 103210827 | 1230840_0:004440 | |||
| 103228066 | CHLSB10608 | |||
| 103277479 | 1868482_0:00078b | CARSF23591 | ||
| 103591567 | 482537_0:001b97 | |||
| 103669531 | 29073_0:000ffe | URSMA17188 | ||
| 103751457 | 1026970_0:00443f | NANGA03023 | ||
| 103788338 | 9483_0:0043a1 | CALJA13297 | ||
| 103824143 | SERCA21591 | |||
| 104676629 | 61622_0:000010 | RHIRO30626 |
