GlyCosmos Portal

Submissions

opsin 4 (melanopsin)

Summary

Gene Symbol

Opn4

Organism

Mus musculus (house mouse)

External Links

NCBI Gene

30044

PubChem

30044

Alliance of Genome Resources

MGI:1353425

Annotation

Keyword

Alternative splicing
Biological rhythms
Cell membrane
Cell projection
Disulfide bond
G-protein coupled receptor
Glycoprotein
Reference proteome
Retinal protein
Transmembrane helix

Proteins

Displaying 1 entry
UniProt	Protein Name
Q9QXZ9	Opsin-4

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **6 - 10** of 18 in total

« First

‹ Prev

1

2

3

4

Next ›

Last »
GO Term	Evidence Code	PMID
phototransduction	IBA
optokinetic behavior	IMP	26392540
detection of visible light	IEA
rhodopsin mediated signaling pathway
regulation of circadian rhythm	IMP	12808468

GO Hierarchy

biological process

cellular process [inference]

signal transduction [inference]

G protein-coupled receptor signaling pathway

rhodopsin mediated signaling pathway

phototransduction

rhodopsin mediated signaling pathway

cellular response to stimulus [inference]

cellular response to environmental stimulus [inference]

cellular response to abiotic stimulus [inference]

cellular response to radiation [inference]

cellular response to light stimulus

rhodopsin mediated signaling pathway

multicellular organismal process [inference]

system process [inference]

nervous system process [inference]

sensory perception [inference]

sensory perception of light stimulus [inference]

visual perception

behavior [inference]

visual behavior [inference]

optokinetic behavior

developmental process [inference]

anatomical structure development [inference]

retina development in camera-type eye

anatomical structure regression [inference]

hyaloid vascular plexus regression

locomotion [inference]

taxis [inference]

thermotaxis

rhythmic process

response to stimulus [inference]

response to external stimulus [inference]

detection of external stimulus [inference]

detection of light stimulus [inference]

phototransduction

rhodopsin mediated signaling pathway

detection of visible light

detection of temperature stimulus [inference]

detection of temperature stimulus involved in sensory perception [inference]

detection of temperature stimulus involved in thermoception

entrainment of circadian clock [inference]

entrainment of circadian clock by photoperiod

response to abiotic stimulus [inference]

response to temperature stimulus [inference]

detection of temperature stimulus [inference]

detection of temperature stimulus involved in sensory perception [inference]

detection of temperature stimulus involved in thermoception

thermotaxis

response to radiation [inference]

response to light stimulus [inference]

visual behavior [inference]

optokinetic behavior

detection of light stimulus [inference]

phototransduction

rhodopsin mediated signaling pathway

detection of visible light

photoperiodism [inference]

entrainment of circadian clock by photoperiod

cellular response to light stimulus

rhodopsin mediated signaling pathway

cellular response to radiation [inference]

cellular response to light stimulus

rhodopsin mediated signaling pathway

detection of abiotic stimulus [inference]

detection of light stimulus [inference]

phototransduction

rhodopsin mediated signaling pathway

detection of visible light

detection of temperature stimulus [inference]

detection of temperature stimulus involved in sensory perception [inference]

detection of temperature stimulus involved in thermoception

cellular response to abiotic stimulus [inference]

cellular response to radiation [inference]

cellular response to light stimulus

rhodopsin mediated signaling pathway

detection of stimulus [inference]

detection of external stimulus [inference]

detection of light stimulus [inference]

phototransduction

rhodopsin mediated signaling pathway

detection of visible light

detection of temperature stimulus [inference]

detection of temperature stimulus involved in sensory perception [inference]

detection of temperature stimulus involved in thermoception

detection of abiotic stimulus [inference]

detection of light stimulus [inference]

phototransduction

rhodopsin mediated signaling pathway

detection of visible light

detection of temperature stimulus [inference]

detection of temperature stimulus involved in sensory perception [inference]

detection of temperature stimulus involved in thermoception

detection of stimulus involved in sensory perception [inference]

detection of temperature stimulus involved in sensory perception [inference]

detection of temperature stimulus involved in thermoception

cellular response to stimulus [inference]

cellular response to environmental stimulus [inference]

cellular response to abiotic stimulus [inference]

cellular response to radiation [inference]

cellular response to light stimulus

rhodopsin mediated signaling pathway

biological regulation [inference]

regulation of biological process [inference]

regulation of circadian rhythm

entrainment of circadian clock [inference]

entrainment of circadian clock by photoperiod

regulation of circadian sleep/wake cycle [inference]

regulation of circadian sleep/wake cycle, sleep [inference]

positive regulation of circadian sleep/wake cycle, sleep

positive regulation of circadian rhythm [inference]

positive regulation of circadian sleep/wake cycle, sleep

positive regulation of biological process [inference]

positive regulation of circadian rhythm [inference]

positive regulation of circadian sleep/wake cycle, sleep

positive regulation of multicellular organismal process [inference]

positive regulation of behavior [inference]

positive regulation of circadian sleep/wake cycle, sleep

regulation of cellular process [inference]

signal transduction [inference]

G protein-coupled receptor signaling pathway

rhodopsin mediated signaling pathway

phototransduction

rhodopsin mediated signaling pathway

regulation of multicellular organismal process [inference]

regulation of behavior [inference]

regulation of circadian sleep/wake cycle [inference]

regulation of circadian sleep/wake cycle, sleep [inference]

positive regulation of circadian sleep/wake cycle, sleep

positive regulation of behavior [inference]

positive regulation of circadian sleep/wake cycle, sleep

positive regulation of multicellular organismal process [inference]

positive regulation of behavior [inference]

positive regulation of circadian sleep/wake cycle, sleep

Displaying entries **1 - 5** of 8 in total

1

2

Next ›

Last »
GO Term	Evidence Code	PMID
plasma membrane	ISS
plasma membrane	ISO
plasma membrane	IBA
membrane	TAS	10632589
axon	IEA

GO Hierarchy

cellular component

cellular anatomical entity [inference]

membrane

plasma membrane

plasma membrane region [inference]

sperm head plasma membrane

cell projection [inference]

plasma membrane bounded cell projection [inference]

neuron projection [inference]

perikaryon

Displaying **all 5** entries
GO Term	Evidence Code	PMID
11-cis retinal binding	ISS
11-cis retinal binding	ISO
G protein-coupled photoreceptor activity	ISO
G protein-coupled photoreceptor activity	IMP	12808468
G protein-coupled photoreceptor activity	IBA

GO Hierarchy

molecular function

binding [inference]

lipid binding [inference]

isoprenoid binding [inference]

retinoid binding [inference]

retinal binding [inference]

11-cis retinal binding

small molecule binding [inference]

vitamin binding [inference]

retinal binding [inference]

11-cis retinal binding

molecular transducer activity [inference]

signaling receptor activity [inference]

transmembrane signaling receptor activity [inference]

G protein-coupled receptor activity [inference]

G protein-coupled photoreceptor activity

photoreceptor activity [inference]

G protein-coupled photoreceptor activity

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

Opsin

Functional Category

E: Amino acid transport and metabolism
O: Posttranslational modification, protein turnover, chaperones
T: Signal transduction mechanisms

Displaying **all 3** entries
Gene Ontology
cellular response to light stimulus
phototransduction
visual perception

Displaying **all 3** entries
InterPro
G protein-coupled receptor, rhodopsin-like
GPCR, rhodopsin-like, 7TM
Visual pigments (opsins) retinal binding site

Ortholog

Displaying entries **1 - 10** of 75 in total

1

2

3

4

5

…

Next ›

Last »
Species	Gene ID	Alliance of Genome Resources	Orthologous MAtrix
Danio rerio	30044	ZFIN:ZDB-GENE-080415-3
Danio rerio	34615	ZFIN:ZDB-GENE-030314-2
Danio rerio	39887	ZFIN:ZDB-GENE-080415-3
Danio rerio	41889	ZFIN:ZDB-GENE-080415-3
Homo sapiens	42261	HGNC:14449
Danio rerio	42367	ZFIN:ZDB-GENE-080415-3
Danio rerio	42398	ZFIN:ZDB-GENE-030314-2
Homo sapiens	94233		HUMAN02015
Rattus norvegicus	192223	ZFIN:ZDB-GENE-080415-3	RATNO10644
Danio rerio	352918	ZFIN:ZDB-GENE-030314-2