Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
Resources Genes Glycoproteins Lectins Glycolipids Glycans Pathways Diseases Organisms
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Other Information
Release Statistics Download
Tools
SugarDrawer GlycanBuilder Glycan Converters GlycoMaple GlycomeAtlas LM-GlycomeAtlas GALAXY MCAW GlycoSim GRable
Search Tools
Cross Search Glycan Search Publication Search Programmatic Access
Standards Ontologies Notations
heparan sulfate proteoglycan 2

Summary
Gene Symbol
  • HSPG2
Aliases
  • PRCAN
  • endorepellin
  • perlecan
  • perlecan proteoglycan
Organism
Homo sapiens (human)
External Links
NCBI Gene
3339
HGNC
5273
KEGG Gene ID
hsa:3339
PubChem
3339
Alliance of Genome Resources
Annotation
Keyword
  • 3D-structure
  • Angiogenesis
  • Basement membrane
  • Calcium
  • Direct protein sequencing
  • Disease variant
  • Disulfide bond
  • EGF-like domain
  • Heparan sulfate
  • Immunoglobulin domain
  • Laminin EGF-like domain
  • Metal-binding
  • Reference proteome
  • Repeat
  • Signal
Proteins
Displaying 1 entry
UniProt Protein Name
P98160
  • Perlecan
Annotation information from UniProt.
Gene Ontology (GO)
Displaying entries 6 - 10 of 16 in total
GO Term Evidence Code PMID
response to hypoxia
circulatory system development
lipid metabolic process
embryo implantation
inflammatory response
GO Hierarchy
Gene Ontology information from NCBI Gene and UniProt.
KEGG BRITE Database
Orthology
K06255
Name
basement membrane-specific heparan sulfate proteoglycan core protein
References
Disease
Disease Ontology
Displaying entries 1 - 10 of 344 in total
DO ID Disease Name Source
DOID:0050185 erythema multiforme
DOID:0050426 Stevens-Johnson syndrome
DOID:0050453 lissencephaly
DOID:0050569 Seckel syndrome
DOID:0050663 Bethlem myopathy
DOID:0050741 alcohol dependence
DOID:0050759 myotonic dystrophy type 2
DOID:0050766 choreaacanthocytosis
DOID:0050777 Joubert syndrome
DOID:0050788 proximal symphalangism
The Human Phenotype Ontology
Displaying entries 91 - 100 of 248 in total
HPO ID HPO Term
HP:0001252 Hypotonia
HP:0001263 Global developmental delay
HP:0001265 Hyporeflexia
HP:0001274 Agenesis of corpus callosum
HP:0001276 Hypertonia
HP:0001288 Gait disturbance
HP:0001324 Muscle weakness
HP:0001344 Absent speech
HP:0001362 Calvarial skull defect
HP:0001371 Flexion contracture
Displaying all 5 entries
Disease ID Disease Name
ORPHA:1606
  • chromosome 1p36 deletion syndrome
ORPHA:800
  • Schwartz-Jampel syndrome
ORPHA:1865
  • Silverman-Handmaker type dyssegmental dysplasia
OMIM:255800
  • Schwartz-Jampel syndrome type 1
OMIM:224410
  • Silverman-Handmaker type dyssegmental dysplasia
PubChem Disease
GHR Health Conditions
MedGen Diseases
OMIM Phenotypes
KEGG Diseases
Gene-Disease-Co-Occurrences-in-Literature (PubChem)
Ortholog
Displaying entries 41 - 50 of 58 in total
Species Gene ID Alliance of Genome Resources Orthologous MAtrix
102011947 CHILA13310
108237624 KRYMA12539
105708530 AOTNA06271
101035920 SAIBB24446
111234870 SERDU15608
101977229 ICTTR08811
101604838 JACJA08831
117026763 RHIFE01766
103225428 CHLSB09274
104663240 RHIRO12474
About Release Notes Help Feedback
International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International

GlyCosmos Portal v4.0.0

Last updated: August 19, 2024