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leucine rich repeat, Ig-like and transmembrane domains 3

Summary

Gene Symbol

LRIT3

Organism

Homo sapiens (human)

External Links

NCBI Gene

345193

PubChem

345193

Alliance of Genome Resources

HGNC:24783

Annotation

Keyword

Alternative splicing
Cell projection
Congenital stationary night blindness
Disease variant
Disulfide bond
Endoplasmic reticulum
Glycoprotein
Immunoglobulin domain
Leucine-rich repeat
Reference proteome
Repeat
Signal
Transmembrane helix
Vision

Proteins

Displaying **all 2** entries
UniProt	Protein Name
A0A0A0MR64
Q3SXY7

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **1 - 5** of 7 in total

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GO Term	Evidence Code	PMID
visual perception	IEA
protein localization	IEA
response to light stimulus	IEA
gene expression	IEA
regulation of fibroblast growth factor receptor signaling pathway	IDA	22673519

GO Hierarchy

biological process

metabolic process [inference]

biosynthetic process [inference]

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

gene expression

organic substance biosynthetic process [inference]

macromolecule biosynthetic process [inference]

gene expression

cellular metabolic process [inference]

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

gene expression

organic substance metabolic process [inference]

macromolecule metabolic process [inference]

macromolecule biosynthetic process [inference]

gene expression

organic substance biosynthetic process [inference]

macromolecule biosynthetic process [inference]

gene expression

cellular process [inference]

cell communication [inference]

cell-cell signaling [inference]

synaptic signaling

cellular metabolic process [inference]

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

gene expression

cellular localization [inference]

cellular macromolecule localization [inference]

protein localization

cellular component organization or biogenesis [inference]

cellular component organization [inference]

cellular component assembly [inference]

cell junction assembly [inference]

synapse assembly [inference]

synapse assembly involved in innervation

cell junction organization [inference]

cell junction assembly [inference]

synapse assembly [inference]

synapse assembly involved in innervation

synapse organization [inference]

synapse assembly [inference]

synapse assembly involved in innervation

multicellular organismal process [inference]

system process [inference]

nervous system process [inference]

sensory perception [inference]

sensory perception of light stimulus [inference]

visual perception

response to stimulus [inference]

response to abiotic stimulus [inference]

response to radiation [inference]

response to light stimulus

localization [inference]

macromolecule localization [inference]

cellular macromolecule localization [inference]

protein localization

cellular localization [inference]

cellular macromolecule localization [inference]

protein localization

biological regulation [inference]

regulation of biological process [inference]

regulation of signaling [inference]

regulation of signal transduction [inference]

regulation of fibroblast growth factor receptor signaling pathway

signaling [inference]

cell-cell signaling [inference]

synaptic signaling

regulation of response to stimulus [inference]

regulation of signal transduction [inference]

regulation of fibroblast growth factor receptor signaling pathway

regulation of cellular response to growth factor stimulus [inference]

regulation of fibroblast growth factor receptor signaling pathway

regulation of cellular process [inference]

regulation of cell communication [inference]

regulation of signal transduction [inference]

regulation of fibroblast growth factor receptor signaling pathway

Displaying **all 5** entries
GO Term	Evidence Code	PMID
endoplasmic reticulum membrane	IEA
dendrite	IEA
perikaryon	IEA
synapse	IEA
cell tip	IEA

GO Hierarchy

cellular component

cellular anatomical entity [inference]

membrane [inference]

organelle membrane [inference]

endoplasmic reticulum membrane

cell junction [inference]

synapse

cell projection [inference]

plasma membrane bounded cell projection [inference]

neuron projection [inference]

dendrite

perikaryon

cell pole [inference]

cell tip

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

Leucine-rich repeat

Functional Category

K: Transcription
O: Posttranslational modification, protein turnover, chaperones
T: Signal transduction mechanisms

Displaying **all 10** entries
InterPro
Fibronectin type III superfamily
Fibronectin type III
Immunoglobulin subtype 2
Immunoglobulin subtype
Immunoglobulin-like domain superfamily
Immunoglobulin-like domain
Immunoglobulin-like fold
Leucine-rich repeat domain superfamily
Leucine-rich repeat, typical subtype
Leucine-rich repeat

Disease

Disease Ontology

Displaying 1 entry
DO ID	Disease Name	Source
DOID:0110864	congenital stationary night blindness 1F	Alliance of Genome Resources

Ortholog

Displaying entries **1 - 10** of 63 in total

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Species	Gene ID	Alliance of Genome Resources	Orthologous MAtrix
Mus musculus	242235	Xenbase:XB-GENE-6076513	MOUSE37497
Xenopus tropicalis	345193	Xenbase:XB-GENE-6076513
Rattus norvegicus	502596		RATNO25075
Bos taurus	511618		BOVIN31065
Canis lupus familiaris	610534		CANLF13153
Macaca mulatta	698360		MACMU37305
Pan troglodytes	737084		PANTR34325
Monodelphis domestica	100010253		MONDO27991
Equus caballus	100072841		HORSE27182
Ornithorhynchus anatinus	100074891		ORNAN04055

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

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Summary

External Links

Annotation

OrthoDB (Group)

International Collaboration

Acknowledgements