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opsin 1 (cone pigments), long-wave-sensitive L homeolog

Summary

Gene Symbol

opn1lw.L

Organism

Xenopus laevis (African clawed frog)

External Links

NCBI Gene

399310

PubChem

399310

Alliance of Genome Resources

Xenbase:XB-GENE-955013

Annotation

Keyword

Disulfide bond
G-protein coupled receptor
Glycoprotein
Phosphoprotein
Reference proteome
Retinal protein
Transmembrane helix
Vision

Proteins

Displaying 1 entry
UniProt	Protein Name
O12948	Red cone photoreceptor pigment

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **1 - 5** of 6 in total

1

2

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GO Term	Evidence Code	PMID
G protein-coupled receptor signaling pathway	IEA
visual perception	IEA
phototransduction	IEA
absorption of visible light	IDA	11545071
absorption of UV light	IDA	11545071

GO Hierarchy

biological process

cellular process [inference]

signal transduction [inference]

light absorption [inference]

cellular response to stimulus [inference]

cellular response to environmental stimulus [inference]

cellular response to abiotic stimulus [inference]

cellular response to radiation [inference]

cellular response to light stimulus

multicellular organismal process [inference]

system process [inference]

nervous system process [inference]

sensory perception [inference]

sensory perception of light stimulus [inference]

visual perception

response to stimulus [inference]

response to external stimulus [inference]

detection of external stimulus [inference]

detection of light stimulus [inference]

phototransduction

response to abiotic stimulus [inference]

response to radiation [inference]

response to light stimulus [inference]

detection of light stimulus [inference]

phototransduction

cellular response to light stimulus

cellular response to radiation [inference]

cellular response to light stimulus

detection of abiotic stimulus [inference]

detection of light stimulus [inference]

phototransduction

cellular response to abiotic stimulus [inference]

cellular response to radiation [inference]

cellular response to light stimulus

detection of stimulus [inference]

detection of external stimulus [inference]

detection of light stimulus [inference]

phototransduction

detection of abiotic stimulus [inference]

detection of light stimulus [inference]

phototransduction

cellular response to stimulus [inference]

cellular response to environmental stimulus [inference]

cellular response to abiotic stimulus [inference]

cellular response to radiation [inference]

cellular response to light stimulus

biological regulation [inference]

regulation of biological process [inference]

regulation of cellular process [inference]

signal transduction [inference]

Displaying **all 2** entries
GO Term	Evidence Code	PMID
photoreceptor outer segment
membrane	IEA

GO Hierarchy

cellular component

cellular anatomical entity [inference]

Displaying **all 3** entries
GO Term	Evidence Code	PMID
G protein-coupled receptor activity	IEA
G protein-coupled photoreceptor activity
photoreceptor activity	IEA

GO Hierarchy

molecular function

molecular transducer activity [inference]

signaling receptor activity [inference]

transmembrane signaling receptor activity [inference]

G protein-coupled receptor activity

G protein-coupled photoreceptor activity

photoreceptor activity

G protein-coupled photoreceptor activity

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

Opsin

Functional Category

G: Carbohydrate transport and metabolism
O: Posttranslational modification, protein turnover, chaperones
T: Signal transduction mechanisms

Displaying **all 4** entries
Gene Ontology
cellular response to light stimulus
photoreceptor activity
phototransduction
visual perception

Displaying **all 5** entries
InterPro
G protein-coupled receptor, rhodopsin-like
GPCR, rhodopsin-like, 7TM
Opsin red/green sensitive
Opsin
Visual pigments (opsins) retinal binding site

Ortholog

Displaying **all 9** entries
Species	Gene ID	Alliance of Genome Resources
Xenopus tropicalis	2652	Xenbase:XB-GENE-955009
Xenopus tropicalis	5956	Xenbase:XB-GENE-955009
Xenopus tropicalis	14539	Xenbase:XB-GENE-955009
Xenopus tropicalis	30413	Xenbase:XB-GENE-955009
Xenopus tropicalis	89810	Xenbase:XB-GENE-955009
Xenopus tropicalis	399310	Xenbase:XB-GENE-955009
Xenopus tropicalis	436716	Xenbase:XB-GENE-955009
Xenopus tropicalis	728458	Xenbase:XB-GENE-955009
Xenopus tropicalis	101060233	Xenbase:XB-GENE-955009