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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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MIRAGE
cadherin related 23
Summary
- Gene Symbol
-
- CDH23
- Organism
- Homo sapiens (human)
Annotation
- Keyword
-
- 3D-structure
- Alternative splicing
- Calcium
- Cell adhesion
- Cell membrane
- Disease variant
- Glycoprotein
- Hearing
- Membrane
- Metal-binding
- Non-syndromic deafness
- Proteomics identification
- Reference proteome
- Repeat
- Retinitis pigmentosa
- Signal
- Transmembrane helix
- Usher syndrome
- Vision
- Proteins
| UniProt | Protein Name |
|---|---|
| A0A087WYR8 |
|
| Q9H251 |
|
| Q8N5B3 |
|
| Q6P152 |
|
| A5D6V9 |
|
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| calcium ion transport | ||
| homophilic cell adhesion via plasma membrane adhesion molecules | ||
| visual perception | ||
| sensory perception of sound | ||
| locomotory behavior |
| GO Term | Evidence Code | PMID |
|---|---|---|
| photoreceptor inner segment | ||
| centrosome | ||
| membrane | ||
| catenin complex | ||
| stereocilium |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| calcium ion binding | ||
| protein binding | ||
| beta-catenin binding | ||
| cadherin binding |
OrthoDB (Group)
- Group level
- Eukaryota
- Group Name
- Cadherin
- Functional Category
-
- E: Amino acid transport and metabolism
- O: Posttranslational modification, protein turnover, chaperones
- Q: Secondary metabolites biosynthesis, transport and catabolism
| Gene Ontology |
|---|
| calcium ion binding |
| homophilic cell adhesion via plasma membrane adhesion molecules |
| InterPro |
|---|
| Cadherin conserved site |
| Cadherin-like superfamily |
| Cadherin-like |
Disease
- Disease Ontology
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:0050565 | autosomal recessive nonsyndromic deafness | |
| DOID:0110467 | autosomal recessive nonsyndromic deafness 12 | |
| DOID:0110831 | Usher syndrome type 1D | |
| DOID:0112008 | pituitary adenoma 5 |
Ortholog
| Species | Gene ID | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|
| 102445964 | PELSI09199 | ||
| 104669929 | RHIRO08086 | ||
| 105466056 | MACNE09899 | ||
| 105597290 | CERAT10285 | ||
| 105825467 | PROCO08331 | ||
| 106576894 | SALSA57132 | ||
| 106579432 | SALSA62345 | ||
| 107549130 | SINGR69146 | ||
| 109048505 | CYPCA80369 | ||
| 109100529 | CYPCA66165 |
