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hemicentin 1

Summary

Gene Symbol

HMCN1

Organism

Homo sapiens (human)

External Links

NCBI Gene

83872

PubChem

83872

Alliance of Genome Resources

HGNC:19194

Annotation

Keyword

Age-related macular degeneration
Alternative splicing
Basement membrane
Calcium
Cell division
Cell junction
Cytoplasm
Disease variant
Disulfide bond
EGF-like domain
Glycoprotein
Immunoglobulin domain
Reference proteome
Repeat
Signal
Vision

Proteins

Displaying 1 entry
UniProt	Protein Name
Q96RW7	Fibulin-6

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **1 - 5** of 7 in total

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GO Term	Evidence Code	PMID
homophilic cell adhesion via plasma membrane adhesion molecules	IBA
heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules	IBA
visual perception	IEA
response to bacterium	IEA
actin cytoskeleton organization	IMP	29488390

GO Hierarchy

biological process

cellular process [inference]

cell adhesion [inference]

cell-cell adhesion [inference]

cell-cell adhesion via plasma-membrane adhesion molecules [inference]

actin filament-based process [inference]

actin cytoskeleton organization

cell division

cellular component organization or biogenesis [inference]

cellular component organization [inference]

organelle organization [inference]

cytoskeleton organization [inference]

actin cytoskeleton organization

extracellular structure organization [inference]

extracellular matrix organization [inference]

basement membrane organization

external encapsulating structure organization [inference]

extracellular matrix organization [inference]

basement membrane organization

multicellular organismal process [inference]

system process [inference]

nervous system process [inference]

sensory perception [inference]

sensory perception of light stimulus [inference]

visual perception

biological process involved in interspecies interaction between organisms [inference]

response to other organism [inference]

response to bacterium

response to stimulus [inference]

response to external stimulus [inference]

response to external biotic stimulus [inference]

response to other organism [inference]

response to bacterium

response to biotic stimulus [inference]

response to external biotic stimulus [inference]

response to other organism [inference]

response to bacterium

Displaying entries **1 - 5** of 10 in total

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GO Term	Evidence Code	PMID
basement membrane	ISS
cytoplasm	ISS
adherens junction	IBA
muscle tendon junction	ISS
cell cortex	IEA

GO Hierarchy

cellular component

cellular anatomical entity [inference]

cytoplasm

cell cortex

membrane [inference]

plasma membrane region [inference]

cleavage furrow

cell junction [inference]

anchoring junction [inference]

cell-cell junction [inference]

adherens junction

cell-substrate junction [inference]

muscle tendon junction

external encapsulating structure [inference]

extracellular matrix [inference]

collagen-containing extracellular matrix

basement membrane

organelle [inference]

membrane-bounded organelle [inference]

vesicle [inference]

extracellular vesicle [inference]

extracellular exosome

extracellular membrane-bounded organelle [inference]

extracellular vesicle [inference]

extracellular exosome

extracellular organelle [inference]

extracellular membrane-bounded organelle [inference]

extracellular vesicle [inference]

extracellular exosome

Displaying **all 3** entries
GO Term	Evidence Code	PMID
extracellular matrix structural constituent	HDA	28344315
calcium ion binding	IEA
protein binding	IPI	19696174

GO Hierarchy

molecular function

structural molecule activity [inference]

extracellular matrix structural constituent

binding [inference]

protein binding

ion binding [inference]

cation binding [inference]

metal ion binding [inference]

calcium ion binding

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

down syndrome cell adhesion molecule-like protein

Functional Category

G: Carbohydrate transport and metabolism
M: Cell wall/membrane/envelope biogenesis
O: Posttranslational modification, protein turnover, chaperones

Displaying **all 6** entries
InterPro
Immunoglobulin I-set
Immunoglobulin subtype 2
Immunoglobulin subtype
Immunoglobulin-like domain superfamily
Immunoglobulin-like domain
Immunoglobulin-like fold

Disease

Disease Ontology

Displaying 1 entry
DO ID	Disease Name	Source
DOID:0110014	age related macular degeneration 1	Alliance of Genome Resources

Ortholog

Displaying entries **41 - 50** of 70 in total

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Species	Gene ID	Orthologous MAtrix
Poecilia reticulata	103468500	POERE31153
Nannospalax galili	103726701	NANGA01487
Serinus canaria	103814806	SERCA08072
Rhinopithecus roxellana	104664431	RHIRO11202
Macaca nemestrina	105484596	MACNE02744
Mandrillus leucophaeus	105553187	MANLE25948
Cercocebus atys	105579984	CERAT21430
Aotus nancymaae	105711611	AOTNA03436
Cyprinodon variegatus	107085948	CYPVA08739
Sinocyclocheilus grahami	107553432	SINGR28938

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

All Resources

Other Information

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Summary

External Links

Annotation

OrthoDB (Group)

International Collaboration

Acknowledgements