Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
G21989SY
Summary
- GlyTouCan ID
-
G21989SY
- IUPAC Condensed
- Fuc(a1-3)Gal(b1-3)[Gal(b1-4)Gal(b1-4)GlcNAc(b1-6)]GalNAc(a1-
- Motifs
- N-acetyllactosamine O-Glycan core 2 Type 2 LN
- Subsumption Level
- Linkage defined saccharide
- Monoisotopic Mass
- 1056.39
3D Structures
- GlycoNAVI
- G21989SY
- GLYCAM
- LFucpa1-3DGalpb1-3[DGalpb1-4DGalpb1-4DGlcpNAcb1-6]DGalpNAca1-OH
Organisms
| Organisms | Evidence |
|---|---|
| Danio rerio (zebrafish) |
Taxonomic Hierarchy
GlycomeAtlas
Tissues in which this glycan is expressed are highlighted in yellow.
- Danio rerio
Literature
- Tissue
-
- heart
- skin gland
- Reference
- Yamakawa N et al. Systems glycomics of adult zebrafish identifies organ-specific sialylation and glycosylation patterns. Nat Commun. 2018;9(1):4647. Published 2018 Nov 7. doi:10.1038/s41467-018-06950-3
- DOI
- 10.1038/s41467-018-06950-3
Localization sites organized by hierarchy by Uber-anatomy ontology (UBERON)
Sequence Descriptors
- GlycoCT
-
RES 1b:a-dgal-HEX-1:5 2s:n-acetyl 3b:b-dgal-HEX-1:5 4b:a-lgal-HEX-1:5|6:d 5b:b-dglc-HEX-1:5 6s:n-acetyl 7b:b-dgal-HEX-1:5 8b:b-dgal-HEX-1:5 LIN 1:1d(2+1)2n 2:1o(3+1)3d 3:3o(3+1)4d 4:1o(6+1)5d 5:5d(2+1)6n 6:5o(4+1)7d 7:7o(4+1)8d
- WURCS
- WURCS=2.0/4,6,5/[a2112h-1a_1-5_2*NCC/3=O][a2112h-1b_1-5][a1221m-1a_1-5][a2122h-1b_1-5_2*NCC/3=O]/1-2-3-4-2-2/a3-b1_a6-d1_b3-c1_d4-e1_e4-f1
