Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
|---|---|---|---|---|---|---|---|
|
P-fimbriae
|
GL-III glycolipid
|
Glycolipids
|
Not Binding
|
||||
|
Lectin-like proteins (adhesin)
|
Mr 89,000 PRG (Proline-Rich Glycoprotein)
|
Glycoproteins
|
Binding
|
||||
|
PspC (Lary family) (alias: SpsA/CbpA/PbcA/Hic)
|
IgA
|
Glycoproteins
|
Binding
|
||||
|
17-kDa HBP (Heparin-binding protein)
|
Thrombospondin (TSP)
|
Glycoproteins
|
Binding
|
||||
|
Pertussis toxin
|
Haptoglobin
|
Glycoproteins
|
Binding
|
||||
|
AgfA (curli)
|
Human contact phase proteins
|
Glycoproteins
|
Binding
|
||||
|
PT (subunit S2 of B oligomer)
|
Haptoglobin
|
Glycoproteins
|
Binding
|
||||
|
Type 1-fimbriae
|
alpha-Mannosyl groups on glycoproteins
|
Glycoproteins
|
Binding
|
||||
|
17-kDa HBP (Heparin-binding protein)
|
Thrombospondin (TSP)
|
Glycoproteins
|
Binding
|
||||
|
SpsA
|
IgA
|
Glycoproteins
|
Binding
|
Displaying entries 1821 - 1830 of 1840 in total
International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
