GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 251 - 275 of 499 in total
Pathway Name Protein Name UniProt ID ▲ Gene Symbol Organism GlyTouCan ID
Ion transport by P-type ATPases
  • W08D2.5
  • cal-5
  • catp-5
  • catp-7
  • catp-8
  • cua-1
  • mca-1
  • mca-2
  • mca-3
  • mca-4
  • pmr-1
  • sca-1
  • tat-1
  • tat-2
  • tat-3
  • tat-4
  • tat-5
  • tat-6
  • unc-43
Caenorhabditis elegans
Apoptotic execution phase
  • 4D656
  • drp-1
Caenorhabditis elegans
Sodium/Proton exchangers
  • nhx-2
  • nhx-3
  • nhx-5
  • nhx-6
  • nhx-7
  • nhx-8
  • nhx-9
  • pbo-4
Caenorhabditis elegans
Hyaluronan uptake and degradation
  • CELE_Y105E8B.9
  • Chnase
  • chhy-1
  • chpf-1
  • hex-1
  • nhx-7
  • pbo-4
Caenorhabditis elegans
Netrin-1 signaling
  • ceh-6
  • erm-1
  • lam-1
  • siah-1
  • tpa-1
  • unc-40
  • unc-5
Caenorhabditis elegans
O-linked glycosylation of mucins
  • C02H6.1
  • C16D9.6
  • C17A2.3
  • C38H2.2
  • C49C3.4
  • CELE_E03H4.3
  • CELE_F56H6.1
  • CELE_W09D10.5
  • CELE_Y38C1AB.1
  • F37A4.3
  • bus-4
  • cnp-2
  • gly-1
  • gly-10
  • gly-11
  • gly-15
  • gly-16
  • gly-17
  • gly-18
  • gly-19
  • gly-3
  • gly-4
  • gly-6
  • gly-7
  • gly-8
  • gly-9
  • paml-1
Caenorhabditis elegans
Sema4D mediated inhibition of cell attachment and migration
  • CELE_F11E6.8
  • R-ras1
  • ced-10
  • mab-20
  • plx-2
  • rac-1
  • ras-1
  • ras1
  • rga-5
  • rho-1
  • rhoa
  • sema-1a
  • smp-1
  • smp-2
  • svh-2
Caenorhabditis elegans
Cross-presentation of particulate exogenous antigens (phagosomes)
  • C03F11.3
  • C05D9.3
  • R07B1.3
  • pat-2
  • pat-3
  • scav-2
  • scav-3
  • scav-4
  • scav-6
Caenorhabditis elegans
TWIK related potassium channel (TREK)
  • B0310.1
  • twk-1
  • twk-11
  • twk-18
  • twk-21
  • twk-22
  • twk-24
  • twk-25
  • twk-26
  • twk-31
  • twk-33
  • twk-34
  • twk-35
  • twk-36
  • twk-42
  • twk-44
  • twk-45
  • twk-49
  • twk-8
Caenorhabditis elegans
Basigin interactions
  • C05D9.3
  • CELE_K03B8.6
  • CELE_T22F3.12
  • cav-1
  • cav-2
  • cyn-4
  • cyp-4
  • ina-1
  • mct-1
  • mct-2
  • mct-3
  • mct-4
  • mct-5
  • mct-6
  • mog-6
  • nkb-1
  • nkb-2
  • nkb-3
  • rig-6
  • slcf-1
  • wrk-1
  • zmp-1
  • zmp-2
  • zmp-3
  • zmp-5
  • zmp-6
Caenorhabditis elegans
EPH-ephrin mediated repulsion of cells
  • CELE_K03B8.6
  • ap50
  • apa-2
  • apb-1
  • aph-1
  • aph-2
  • aps-2
  • ced-10
  • chc-1
  • clic-1
  • dpy-23
  • dyn-1
  • efn-2
  • efn-3
  • efn-4
  • mab-26
  • pen-1
  • pen-2
  • rac-1
  • sel-12
  • src-1
  • tiam-1
  • vab-1
  • vab-2
  • vav-1
  • zmp-1
  • zmp-2
  • zmp-3
  • zmp-5
  • zmp-6
Caenorhabditis elegans
Collagen degradation
  • C16E9.1
  • CELE_K03B8.6
  • clb-2
  • cle-1
  • emb-9
  • eppl-1
  • zmp-1
  • zmp-2
  • zmp-3
  • zmp-5
  • zmp-6
Caenorhabditis elegans
Activation of Matrix Metalloproteinases
  • CELE_K03B8.6
  • CELE_T22A3.6
  • cpl-1
  • kpc-1
  • tag-225
  • timp-1
  • zmp-1
  • zmp-2
  • zmp-3
  • zmp-5
  • zmp-6
Caenorhabditis elegans
EGFR Transactivation by Gastrin
  • CELE_K03B8.6
  • kin-11
  • kin-7
  • let-23
  • let-341
  • let-60
  • lin-34
  • pkc-2
  • sem-5
  • sos-1
  • zmp-1
  • zmp-2
  • zmp-3
  • zmp-5
  • zmp-6
Caenorhabditis elegans
Scavenging of heme from plasma
  • CELE_K03B8.6
  • zmp-1
  • zmp-2
  • zmp-3
  • zmp-5
  • zmp-6
Caenorhabditis elegans
Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha
  • 3L686
  • C14C10.5
  • CELE_F35G12.12
  • ccd-3
  • cul-2
  • div-3
  • egl-9
  • elb-1
  • elc-1
  • hif-1
  • let-70
  • pas-1
  • pas-2
  • pas-3
  • pas-4
  • pas-5
  • pas-6
  • pbs-1
  • pbs-2
  • pbs-3
  • pbs-4
  • pbs-5
  • pbs-7
  • psmd-9
  • psme-3
  • rbx-1
  • rpn-1
  • rpn-10
  • rpn-11
  • rpn-12
  • rpn-2
  • rpn-3
  • rpn-5
  • rpn-6.1
  • rpn-7
  • rpn-8
  • rpn-9
  • rpt-1
  • rpt-2
  • rpt-3
  • rpt-4
  • rpt-5
  • rpt-6
  • ubc-2
  • ubia
  • ubib
  • ubl-1
  • ubq-1
  • ubq-2
  • vhl-1
Caenorhabditis elegans
Adrenoceptors
  • ser-2
  • ser-5
  • tyra-2
Caenorhabditis elegans
Smooth Muscle Contraction
  • C05D9.3
  • C36E8.4
  • alh-1
  • cal-7
  • deb-1
  • lev-11
  • mlc-1
  • mlc-2
  • mlc-3
  • mlc-4
  • mlc-5
  • mlc-6
  • mlc-7
  • nmy-1
  • nmy-2
  • pat-2
  • pat-3
  • sorb-1
  • tln-1
  • tmd-1
  • tmd-2
  • tmy-1
  • unc-94
Caenorhabditis elegans
Downregulation of TGF-beta receptor signaling
  • 1G758
  • cet-1
  • chn-1
  • daf-1
  • daf-4
  • daf-7
  • daf-8
  • dbl-1
  • tag-68
  • ubia
  • ubib
  • ubl-1
  • ubq-1
  • ubq-2
  • unc-129
Caenorhabditis elegans
Regulation of RUNX3 expression and activity
  • CELE_F35G12.12
  • bro-1
  • cet-1
  • daf-7
  • dbl-1
  • mab-2
  • pas-1
  • pas-2
  • pas-3
  • pas-4
  • pas-5
  • pas-6
  • pbs-1
  • pbs-2
  • pbs-3
  • pbs-4
  • pbs-5
  • pbs-7
  • psmd-9
  • psme-3
  • rnt-1
  • rpn-1
  • rpn-10
  • rpn-11
  • rpn-12
  • rpn-2
  • rpn-3
  • rpn-5
  • rpn-6.1
  • rpn-7
  • rpn-8
  • rpn-9
  • rpt-1
  • rpt-2
  • rpt-3
  • rpt-4
  • rpt-5
  • rpt-6
  • run-1
  • src-1
  • ubia
  • ubib
  • ubl-1
  • ubq-1
  • ubq-2
  • unc-129
Caenorhabditis elegans
RUNX3 regulates p14-ARF
  • bro-1
  • cbp-1
  • cet-1
  • cyd-1
  • daf-7
  • dbl-1
  • hda-4
  • hda-7
  • mab-2
  • rnt-1
  • run-1
  • unc-129
Caenorhabditis elegans
RUNX3 regulates CDKN1A transcription
  • cem-3
  • cet-1
  • daf-7
  • daf-8
  • dbl-1
  • mab-2
  • rnt-1
  • run-1
  • sma-4
  • unc-129
  • zfh-2
Caenorhabditis elegans
TGF-beta receptor signaling activates SMADs
  • C05D9.3
  • aka-1
  • cem-3
  • cet-1
  • daf-1
  • daf-4
  • daf-7
  • daf-8
  • dbl-1
  • fkb-2
  • fkb-8
  • kpc-1
  • nid-1
  • pat-2
  • pat-3
  • sli-1
  • sma-4
  • unc-129
Caenorhabditis elegans
Molecules associated with elastic fibres
  • C05D9.3
  • cet-1
  • daf-7
  • dbl-1
  • fbl-1
  • fbln1
  • nid-1
  • pat-2
  • pat-3
  • unc-129
Caenorhabditis elegans
Syndecan interactions
  • C05D9.3
  • cet-1
  • daf-7
  • dbl-1
  • ina-1
  • kin-11
  • let-756
  • pat-2
  • pat-3
  • pkc-2
  • sdn-1
  • unc-129
Caenorhabditis elegans

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

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Supported by JST NBDC Grant Number JPMJND2204

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