GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **351 - 375** of **499** in total

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Pathway Name	Protein Name	UniProt ID	Gene Symbol ▼	Organism	GlyTouCan ID
Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA	14-3-3-like protein 1 14-3-3-like protein 2 5'-3' exoribonuclease 1 C3H1-type domain-containing protein C3H1-type domain-containing protein C3H1-type domain-containing protein C3H1-type domain-containing protein C3H1-type domain-containing protein C3H1-type domain-containing protein C3H1-type domain-containing protein C3H1-type domain-containing protein C3H1-type domain-containing protein C3H1-type domain-containing protein CCCH-type zinc finger protein moe-3 CCCH-type zinc finger protein oma-1 CCCH-type zinc finger protein oma-2 Exoribonuclease phosphorolytic domain-containing protein Exosome complex component CSL4 homolog Exosome complex component RRP4 homolog Exosome complex component RRP45 Exosome complex component RRP46 homolog MAP kinase-activated protein kinase mak-1 MAP kinase-activated protein kinase mak-2 Pharynx and intestine in excess protein 1 Probable exosome complex exonuclease RRP44 Putative exosome complex component RRP41 RNA-binding protein pos-1 Ribosomal RNA-processing protein 40 Ribosomal RNA-processing protein 42 Ribosomal RNA-processing protein 43 Serine/threonine-protein kinase akt-1 Serine/threonine-protein kinase akt-2 Zinc finger protein mex-5 Zinc finger protein mex-6 m7GpppN-mRNA hydrolase dcap-2 mRNA-decapping enzyme 1	G5EC86 G5ECB9 G5EDS8 G5EF15 G5EG59 O18251 O45289 O45491 O45493 O62255 P41932 Q09436 Q17533 Q17632 Q17941 Q20128 Q20155 Q20655 Q21360 Q23359 Q93830 Q94131 Q95QG7 Q95XD0 Q965G5 Q9BHK7 Q9N363 Q9N4P9 Q9U1Y2 Q9U2V1 Q9U2V2 Q9U2V4 Q9XTG7 Q9XUB2 Q9XV46 Q9XXD2	C35D6.4 CELE_F38C2.7 CELE_Y116A8C.19 CELE_Y116A8C.20 CELE_Y60A9.3 akt-1 akt-2 ccch-1 ccch-2 ccch-5 crn-5 dcap-1 dcap-2 dcp-2 dct-13 dis-3 exos-1 exos-2 exos-3 exos-4.1 exos-4.2 exos-7 exos-8 exos-9 ftt-1 ftt-2 mak-1 mak-2 mex-1 mex-5 mex-6 moe-1 moe-2 moe-3 ndx-5 oma-1 oma-2 par-5 pic-1 pie-1 pos-1 xrn-1	Caenorhabditis elegans
RHOH GTPase cycle	ANK_REP_REGION domain-containing protein Amino acid transporter Amino acid transporter Anion exchange protein Armadillo repeat-containing protein wrm-1 Beta-catenin-like protein hmp-2 Beta-catenin/armadillo-related protein 1 Caveolin-1 Caveolin-2 Excitatory amino acid transporter Glutamate carboxypeptidase 2 homolog Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial N-acetylated-alpha-linked acidic dipeptidase 2 Probable methionine synthase Probable rho GDP-dissociation inhibitor Protein FAM91A1 Protein kinase domain-containing protein Putative NipSnap protein K02D10.1 Putative sodium-dependent excitatory amino acid transporter glt-3 Putative sodium-dependent excitatory amino acid transporter glt-4 Putative sodium-dependent excitatory amino acid transporter glt-6 Rap-GAP domain-containing protein Ras-related protein Rab-18 Ras-related protein Rab-7a Ras-related protein ced-10 Ras-related protein rac-2 Rho-associated protein kinase let-502 Serine/threonine-protein kinase max-2 Serine/threonine-protein kinase pak-1 Serine/threonine-protein kinase pak-2 Stomatin-2 Synaptobrevin-1 Transitional endoplasmic reticulum ATPase homolog 2 Tyrosine protein-kinase src-1 Tyrosine-protein kinase csk-1 Tyrosine-protein kinase Tyrosine-protein kinase Tyrosine-protein kinase Tyrosine-protein kinase Tyrosine-protein kinase Tyrosine-protein kinase UBX domain-containing protein 2 Vang-like protein WD_REPEATS_REGION domain-containing protein	A0A061ADQ6 A0A0K3ARA3 B3WFV9 G5EBM6 G5ECJ6 G5EE56 G5EFU0 G5EGQ3 H2KY90 H2KZ40 O02495 O18210 O44326 O62219 P34492 P54812 P91406 P92199 Q03206 Q09582 Q10901 Q10953 Q17850 Q18462 Q18825 Q18879 Q19958 Q20496 Q21353 Q21751 Q22682 Q23146 Q23571 Q23595 Q93332 Q94051 Q94124 Q9BL44 Q9N2W5 Q9N4S6 Q9U3B5 Q9UAY8 Q9XW34 V6CLC2	C34F11.5 CELE_F33H2.2 CELE_K09B11.5 CELE_R151.1 CELE_T25B9.5 CELE_Y110A7A.9 CELE_Y52D5A.2 CELE_Y69E1A.3 CELE_Y71H2AM.12 CELE_ZK792.4 K02D10.1 abts-1 bar-1 cav-1 cav-2 cdc-48.2 ced-10 csk-1 dbt-1 gcp-2.1 gcp-2.2 glt-1 glt-3 glt-4 glt-5 glt-6 glt-7 hgap-1 hmp-2 kin-21 let-502 max-2 metr-1 pak-1 pak-2 pvl-1 rab-7 rac-1 rac-2 rhi-1 snb-1 spy-1 src-1 sto-2 ubxn-2 vang-1 wrm-1	Caenorhabditis elegans
Lysosomal oligosaccharide catabolism	Alpha-mannosidase Probable beta-mannosidase	Q20829 Q93324	C33G3.4 aman-1	Caenorhabditis elegans	G00027MO G28233ME G70323CJ G90333CG
Recycling of bile acids and salts	ABC transmembrane type-1 domain-containing protein Acyl-coenzyme A thioesterase 1-like BAAT/acyl-CoA thioester hydrolase protein BAAT/acyl-CoA thioester hydrolase protein BAAT_C domain-containing protein Fatty acid-binding protein homolog 5 Fatty acid-binding protein homolog 6 Fatty acid-binding protein homolog 7 Fatty acid-binding protein homolog 8 Long-chain-fatty-acid--CoA ligase Long-chain-fatty-acid--CoA ligase Multidrug resistance protein mrp-7 Multidrug resistance-associated protein 1 Multidrug resistance-associated protein 1 Multidrug resistance-associated protein 1 Multidrug resistance-associated protein 1 P3 protein START domain-containing protein Solute carrier organic anion transporter family member	B3WFZ3 G5EFP3 O01812 O01814 O01862 O02323 O02324 O45003 Q18916 Q19048 Q19878 Q20943 Q21130 Q33BL1 Q3S1M2 Q93550 Q9GYN3 Q9U2G5 Q9XW61	C31H5.6 CELE_F21G4.1 CELE_K02D3.2 CELE_K05B2.4 CELE_T05E7.1 CELE_W03D8.8 CELE_Y71G10AR.4 acs-20 acs-22 lbp-5 lbp-6 lbp-7 lbp-8 mrp-1 mrp-2 mrp-3 mrp-4 mrp-7 mrp-8	Caenorhabditis elegans
Common Pathway of Fibrin Clot Formation	SERPIN domain-containing protein SERPIN domain-containing protein Serine or cysteine protease inhibitor Serine or cysteine protease inhibitor Serine or cysteine protease inhibitor Serpin domain-containing protein Serpin domain-containing protein Serpin domain-containing protein Serpin domain-containing protein	A9Z1L1 G5ECY2 G5EE40 G5EFH4 O17365 O45520 Q18287 Q19651 Q9XVQ1	C28G1.2 CELE_F15D3.4 CELE_F44G3.7 srp-1 srp-2 srp-3 srp-6 srp-7 srp-8	Caenorhabditis elegans
Intrinsic Pathway of Fibrin Clot Formation	SERPIN domain-containing protein SERPIN domain-containing protein Serine or cysteine protease inhibitor Serine or cysteine protease inhibitor Serine or cysteine protease inhibitor Serpin domain-containing protein Serpin domain-containing protein Serpin domain-containing protein Serpin domain-containing protein	A9Z1L1 G5ECY2 G5EE40 G5EFH4 O17365 O45520 Q18287 Q19651 Q9XVQ1	C28G1.2 CELE_F15D3.4 CELE_F44G3.7 srp-1 srp-2 srp-3 srp-6 srp-7 srp-8	Caenorhabditis elegans
Glucocorticoid biosynthesis	SERPIN domain-containing protein SERPIN domain-containing protein Serine or cysteine protease inhibitor Serine or cysteine protease inhibitor Serine or cysteine protease inhibitor Serpin domain-containing protein Serpin domain-containing protein Serpin domain-containing protein Serpin domain-containing protein	A9Z1L1 G5ECY2 G5EE40 G5EFH4 O17365 O45520 Q18287 Q19651 Q9XVQ1	C28G1.2 CELE_F15D3.4 CELE_F44G3.7 srp-1 srp-2 srp-3 srp-6 srp-7 srp-8	Caenorhabditis elegans
Peptide ligand-binding receptors	G-protein coupled receptors family 1 profile domain-containing protein SERPIN domain-containing protein SERPIN domain-containing protein Serine or cysteine protease inhibitor Serine or cysteine protease inhibitor Serine or cysteine protease inhibitor Serpin domain-containing protein Serpin domain-containing protein Serpin domain-containing protein Serpin domain-containing protein	A9Z1L1 G5ECY2 G5EE40 G5EFH4 O17365 O18014 O45520 Q18287 Q19651 Q9XVQ1	C28G1.2 CELE_F15D3.4 CELE_F44G3.7 npr-25 srp-1 srp-2 srp-3 srp-6 srp-7 srp-8	Caenorhabditis elegans
RUNX1 regulates transcription of genes involved in differentiation of keratinocytes	Cathepsin L-like SERPIN domain-containing protein SERPIN domain-containing protein Serine or cysteine protease inhibitor Serine or cysteine protease inhibitor Serine or cysteine protease inhibitor Serpin domain-containing protein Serpin domain-containing protein Serpin domain-containing protein Serpin domain-containing protein	A9Z1L1 G5ECY2 G5EE40 G5EFH4 O17365 O45520 O45734 Q18287 Q19651 Q9XVQ1	C28G1.2 CELE_F15D3.4 CELE_F44G3.7 cpl-1 srp-1 srp-2 srp-3 srp-6 srp-7 srp-8	Caenorhabditis elegans
Cargo concentration in the ER	Cathepsin Z-1 ERGIC-53-like protein Fibronectin type-III domain-containing protein GLutamate Receptor family (AMPA) GLutamate Receptor family (AMPA) GLutamate Receptor family (AMPA) Glutamate receptor 1 Glutamate receptor 2 Glutamate receptor ionotropic, kainate 2 Glutamate receptor ionotropic, kainate glr-3 Golgi SNAP receptor complex member 2 homolog memb-1 L-type lectin-like domain-containing protein Protein cornichon homolog 1 Protein transport protein SEC23 Protein transport protein Sec24C Putative syntaxin-5 SERPIN domain-containing protein SERPIN domain-containing protein Serine or cysteine protease inhibitor Serine or cysteine protease inhibitor Serine or cysteine protease inhibitor Serpin domain-containing protein Serpin domain-containing protein Serpin domain-containing protein Serpin domain-containing protein Small COPII coat GTPase SAR1 Vesicle-trafficking protein SEC22b Yeast SEC homolog	A0A1T5HUM0 A9Z1L1 G5ECY2 G5EDE8 G5EE40 G5EFH4 G5EGA4 G5EGP8 O01623 O17365 O45520 P34299 P41941 Q10914 Q17697 Q18287 Q19371 Q19651 Q20797 Q21415 Q22170 Q22361 Q23368 Q23445 Q8MXV8 Q94241 Q9U2Z1 Q9XVQ1	C28G1.2 CELE_F15D3.4 CELE_F44G3.7 cle-1 cni-1 cnih-2 cpz-1 glr-1 glr-2 glr-3 glr-4 glr-5 glr-6 glr-7 gosr-2.1 ile-1 ile-2 memb-1 sar-1 sec-22 sec-23 sec-24.1 sec-24.2 srp-1 srp-2 srp-3 srp-6 srp-7 srp-8 syn-3 syx-5	Caenorhabditis elegans
Dissolution of Fibrin Clot	Kringle domain-containing protein SERPIN domain-containing protein SERPIN domain-containing protein Serine or cysteine protease inhibitor Serine or cysteine protease inhibitor Serine or cysteine protease inhibitor Serpin domain-containing protein Serpin domain-containing protein Serpin domain-containing protein Serpin domain-containing protein	A9Z1L1 G5ECY2 G5EE40 G5EFH4 O17365 O45520 P91823 Q18287 Q19651 Q9XVQ1	C28G1.2 CELE_F15D3.4 CELE_F44G3.7 CELE_T22A3.6 srp-1 srp-2 srp-3 srp-6 srp-7 srp-8	Caenorhabditis elegans
COPII-mediated vesicle transport	Alpha-soluble NSF attachment protein BET1 Cathepsin Z-1 DUF727 domain-containing protein ERGIC-53-like protein Fibronectin type-III domain-containing protein GLutamate Receptor family (AMPA) GLutamate Receptor family (AMPA) GLutamate Receptor family (AMPA) Gamma-soluble NSF attachment protein Glutamate receptor 1 Glutamate receptor 2 Glutamate receptor ionotropic, kainate 2 Glutamate receptor ionotropic, kainate glr-3 Golgi SNAP receptor complex member 2 homolog memb-1 Golgin subfamily A conserved domain-containing protein L-type lectin-like domain-containing protein PDZ GRASP-type domain-containing protein Probable trafficking protein particle complex subunit 2 Protein SEC13 homolog Protein cornichon homolog 1 Protein tfg-1 Protein transport protein SEC23 Protein transport protein Sec24C Protein transport protein sec-16A.1 Protein transport protein sec16 Putative syntaxin-5 RAB family Rab-GAP TBC domain-containing protein SERPIN domain-containing protein SERPIN domain-containing protein Sec1 family domain-containing protein 1 Serine or cysteine protease inhibitor Serine or cysteine protease inhibitor Serine or cysteine protease inhibitor Serpin domain-containing protein Serpin domain-containing protein Serpin domain-containing protein Serpin domain-containing protein Small COPII coat GTPase SAR1 Trafficking protein particle complex subunit 10 Trafficking protein particle complex subunit 2-like protein Trafficking protein particle complex subunit 3 homolog Trafficking protein particle complex subunit 5 Trafficking protein particle complex subunit 6B Trafficking protein particle complex subunit 9 Trafficking protein particle complex subunit Trafficking protein particle complex subunit Uso1_p115_head domain-containing protein Vesicle-fusing ATPase Vesicle-trafficking protein SEC22b WD_REPEATS_REGION domain-containing protein WD_REPEATS_REGION domain-containing protein YKT6 (Yeast v-SNARE) homolog Yeast SEC homolog	A0A1T5HUM0 A9Z1L1 B1GRL5 B1V899 G4SNB8 G5ECY2 G5EDE8 G5EE40 G5EEU1 G5EFH4 G5EFY6 G5EGA4 G5EGG0 G5EGP8 H2KZQ8 O01623 O02173 O17365 O45520 P34299 P34605 P34643 P41941 Q10914 Q17697 Q18287 Q18921 Q19371 Q19651 Q19989 Q1RPT8 Q20100 Q20364 Q20797 Q21115 Q21415 Q22170 Q22361 Q23368 Q23445 Q8MXV8 Q93330 Q94241 Q94392 Q9N3Y1 Q9N4A7 Q9NA81 Q9NEQ8 Q9TXZ9 Q9U1W1 Q9U2Z1 Q9UAQ6 Q9XU81 Q9XVQ1 Q9XWI2	C28G1.2 CELE_F15D3.4 CELE_F44G3.7 CELE_T10F2.5 CELE_Y42H9AR.1 CELE_Y59A8B.25 CELE_Y59A8B.8 CeSec13R cle-1 cni-1 cnih-2 cpz-1 glr-1 glr-2 glr-3 glr-4 glr-5 glr-6 glr-7 golg-2 gosr-2.1 ile-1 ile-2 memb-1 nbet-1 npp-20 nsf-1 rab-1 sar-1 sec-12 sec-13 sec-16 sec-16A.1 sec-16A.2 sec-16a.2 sec-22 sec-23 sec-24.1 sec-24.2 sec-31 sedl-1 sly-1 snap-1 srp-1 srp-2 srp-3 srp-6 srp-7 srp-8 syn-3 syx-5 tbc-20 tfg-1 trpp-1 trpp-10 trpp-3 trpp-4 trpp-5 trpp-6 trpp-9 uso-1 ykt-6	Caenorhabditis elegans
Aspartate and asparagine metabolism	Asparagine synthetase [glutamine-hydrolyzing] Aspartate aminotransferase, cytoplasmic Aspartate aminotransferase Glutamate carboxypeptidase 2 homolog N-acetylated-alpha-linked acidic dipeptidase 2 Probable calcium-binding mitochondrial carrier K02F3.2 asparaginase	O16924 P91406 Q17994 Q21153 Q22067 Q93332 Q9U3P0	C27A7.5 K02F3.2 asns-1 gcp-2.1 gcp-2.2 got-1 got-1.2 got-2.2	Caenorhabditis elegans
Vitamin B2 (riboflavin) metabolism	Ectonucleotide pyrophosphatase/phosphodiesterase C27A7.1 Ectonucleotide pyrophosphatase/phosphodiesterase C27A7.3 Probable FAD synthase Riboflavin transporter rft-1 Riboflavin transporter rft-2 Tartrate-resistant acid phosphatase type 5 riboflavin kinase	G4SDH4 O01320 P90754 P90755 Q21918 Q22017 Q3LFN0	C27A7.1 C27A7.3 CELE_F02E9.7 flad-1 rfk-1 rft-1 rft-2	Caenorhabditis elegans
GDP-fucose biosynthesis	GDP-L-fucose synthase GDP-fucose transporter GDP-mannose 4,6 dehydratase 1 GHMP kinase N-terminal domain-containing protein L-fucokinase domain-containing protein	G5EER4 Q0PDK5 Q18214 Q18801 Q968A5	C26D10.4 CELE_K03H1.13 bre-1 ger-1 gmd-1 nstp-10	Caenorhabditis elegans	G85196CF
Heme signaling	C-type lectin domain-containing protein C-type lectin domain-containing protein Protein vem-1 Proton-coupled folate transporter SoLute Carrier family Related SoLute Carrier family Related Solute carrier family 46 member 3	A0A061AD52 G5EFM5 H2KZC0 Q20236 Q7YZW5 Q9UAZ6 Q9XWL3	C25G4.17 clec-185 slc-46A slc-46a slcr-46.1 slcr-46.2 slcr-46.3 vem-1	Caenorhabditis elegans
alpha-linolenic acid (ALA) metabolism	ABC transporter domain-containing protein Acyl-coenzyme A oxidase acox-1.3 Delta(5) fatty acid desaturase fat-4 Delta(6)-fatty-acid desaturase fat-3 Elongation of very long chain fatty acids protein Elongation of very long chain fatty acids protein Elongation of very long chain fatty acids protein Long chain fatty acid elongase 1 Long chain fatty acid elongase 2 Long chain fatty acid elongase 5 Long chain fatty acid elongase 6 MaoC-like domain-containing protein Putative fatty acid elongase 3 Putative fatty acid elongase 4 palmitoyl-CoA hydrolase	F3Y5R4 G5EEE5 G5EG11 O45730 O62138 P49191 Q03574 Q19058 Q20300 Q20303 Q20904 Q23221 Q9BIA9 Q9NAC6 Q9XVQ9	C17C3.1 acox-1.3 acox-3 des-5 elo-1 elo-2 elo-3 elo-4 elo-5 elo-6 elo-7 elo-8 elo-9 fat-3 fat-4 maoc-1 pmp-4	Caenorhabditis elegans
Collagen degradation	Collagen alpha-1(IV) chain Ethanolamine-phosphate phospho-lyase homolog 1 Fibronectin type-III domain-containing protein MMP-like protein Matrix metalloproteinase-A Matrix metalloproteinase-B Matrix metalloproteinase-C Peptidase metallopeptidase domain-containing protein Uncharacterized protein VWFA domain-containing protein	G5EBU3 G5ECC4 G5EGA4 G5EGM1 O17913 O44836 P17139 P91408 Q18048 Q21182	C16E9.1 CELE_K03B8.6 clb-2 cle-1 emb-9 eppl-1 zmp-1 zmp-2 zmp-3 zmp-5 zmp-6	Caenorhabditis elegans
Assembly of collagen fibrils and other multimeric structures	Fibronectin type-III domain-containing protein Putative cuticle collagen 99 VWFA domain-containing protein VWFA domain-containing protein VWFA domain-containing protein VWFA domain-containing protein VWFA domain-containing protein VWFA domain-containing protein VWFA domain-containing protein	G5EGA4 G5EGU7 O01545 O76368 O76836 Q18048 Q21394 Q9GZF5 Q9N5F6	C16E9.1 C18H7.1 C29A12.6 CELE_F31F7.2 CELE_K09E2.1 CELE_R193.2 CELE_T19D12.4 cle-1 col-99	Caenorhabditis elegans
Collagen chain trimerization	Collagen alpha-1(IV) chain Fibronectin type-III domain-containing protein Putative cuticle collagen 99 VWFA domain-containing protein VWFA domain-containing protein VWFA domain-containing protein VWFA domain-containing protein VWFA domain-containing protein VWFA domain-containing protein VWFA domain-containing protein	G5EGA4 G5EGU7 O01545 O76368 O76836 P17139 Q18048 Q21394 Q9GZF5 Q9N5F6	C16E9.1 C18H7.1 C29A12.6 CELE_F31F7.2 CELE_K09E2.1 CELE_R193.2 CELE_T19D12.4 clb-2 cle-1 col-99 emb-9	Caenorhabditis elegans
Signaling by PDGF	Discoidin domain-containing receptor tyrosine kinase B Furin-like protease kpc-1 Kringle domain-containing protein Platelet-derived growth factor (PDGF) family profile domain-containing protein Protein kinase domain-containing protein Protein kinase domain-containing protein VWFA domain-containing protein VWFA domain-containing protein VWFA domain-containing protein VWFA domain-containing protein VWFA domain-containing protein VWFA domain-containing protein VWFA domain-containing protein	A0A1I6CMA1 G5EGU7 O01545 O17798 O76836 P91823 Q18048 Q21046 Q21394 Q95ZV7 Q9GZF5 Q9N413 Q9N5F6	C16E9.1 C18H7.1 C29A12.6 CELE_F31F7.2 CELE_F59F5.3 CELE_K09E2.1 CELE_R193.2 CELE_T19D12.4 CELE_T22A3.6 ddr-2 kin-36 kpc-1 pvf-1 svh-4	Caenorhabditis elegans
GTP hydrolysis and joining of the 60S ribosomal subunit	60S ribosomal protein L29 Eukaryotic translation initiation factor 5B Large ribosomal subunit protein P1 Large ribosomal subunit protein P2 Large ribosomal subunit protein eL13 Large ribosomal subunit protein eL14 Large ribosomal subunit protein eL15 Large ribosomal subunit protein eL18 Large ribosomal subunit protein eL19 Large ribosomal subunit protein eL20 Large ribosomal subunit protein eL21 Large ribosomal subunit protein eL22 Large ribosomal subunit protein eL24 Large ribosomal subunit protein eL27 Large ribosomal subunit protein eL28 Large ribosomal subunit protein eL30 Large ribosomal subunit protein eL31 Large ribosomal subunit protein eL32 Large ribosomal subunit protein eL33 Large ribosomal subunit protein eL36 Large ribosomal subunit protein eL38 Large ribosomal subunit protein eL39 Large ribosomal subunit protein eL42 Large ribosomal subunit protein eL43 Large ribosomal subunit protein eL6 Large ribosomal subunit protein eL8 Large ribosomal subunit protein uL10 Large ribosomal subunit protein uL11 Large ribosomal subunit protein uL13 Large ribosomal subunit protein uL14 Large ribosomal subunit protein uL15 Large ribosomal subunit protein uL16 Large ribosomal subunit protein uL18 Large ribosomal subunit protein uL1 Large ribosomal subunit protein uL22 Large ribosomal subunit protein uL23B Large ribosomal subunit protein uL24 Large ribosomal subunit protein uL29 Large ribosomal subunit protein uL2 Large ribosomal subunit protein uL30 Large ribosomal subunit protein uL3 Large ribosomal subunit protein uL4 Large ribosomal subunit protein uL5B Large ribosomal subunit protein uL6 Plectin/S10 N-terminal domain-containing protein Ribosomal Protein, Small subunit Ribosomal protein L37 Small ribosomal subunit protein eS12 Small ribosomal subunit protein eS17 Small ribosomal subunit protein eS19 Small ribosomal subunit protein eS1 Small ribosomal subunit protein eS21 Small ribosomal subunit protein eS24 Small ribosomal subunit protein eS25 Small ribosomal subunit protein eS26 Small ribosomal subunit protein eS27 Small ribosomal subunit protein eS28 Small ribosomal subunit protein eS4 Small ribosomal subunit protein eS6 Small ribosomal subunit protein eS7 Small ribosomal subunit protein eS8 Small ribosomal subunit protein uS10 Small ribosomal subunit protein uS11 Small ribosomal subunit protein uS12 Small ribosomal subunit protein uS13 Small ribosomal subunit protein uS14 Small ribosomal subunit protein uS15 Small ribosomal subunit protein uS17 Small ribosomal subunit protein uS19 Small ribosomal subunit protein uS2 Small ribosomal subunit protein uS3 Small ribosomal subunit protein uS4 Small ribosomal subunit protein uS5 Small ribosomal subunit protein uS7 Small ribosomal subunit protein uS9 Ubiquitin-like domain-containing protein Ubiquitin-like domain-containing protein Ubiquitin-like domain-containing protein Ubiquitin-like protein 1-ribosomal protein eS31 fusion protein	G4S0D4 G5EGT7 O01504 O01692 O01802 O01868 O01869 O02056 O02639 O17218 O17570 O18240 O18650 O44480 O45226 O45499 O45946 O62388 P34334 P34662 P37165 P46769 P47991 P48150 P48152 P48154 P48156 P48158 P48166 P49041 P49180 P49181 P49196 P49197 P49405 P50880 P51403 P51404 P52814 P52819 P52821 P61866 P90983 P91053 P91055 P91128 P91374 P91913 P91914 Q09533 Q19162 Q19869 Q19877 Q1XFY9 Q20206 Q20228 Q20647 Q21930 Q22054 Q22716 Q23312 Q27389 Q8WQA8 Q93572 Q95Y04 Q95Y90 Q966C6 Q9BKU5 Q9BL19 Q9N3X2 Q9N4I4 Q9NEN6 Q9TXP0 Q9U2A8 Q9U332 Q9XVE9 Q9XVF7 Q9XVP0 Q9XWS4	C16C8.14 C16C8.16 C16C8.20 C37A2.7 CELE_W01D2.1 CELE_Y37E3.8 iffb-1 rla-0 rla-1 rpa-0 rpa-1 rpl-1 rpl-10 rpl-10a rpl-11.2 rpl-12 rpl-13 rpl-14 rpl-15 rpl-16 rpl-17 rpl-18 rpl-19 rpl-2 rpl-20 rpl-21 rpl-22 rpl-23 rpl-24.1 rpl-25.2 rpl-26 rpl-27 rpl-28 rpl-29 rpl-3 rpl-30 rpl-31 rpl-32 rpl-33 rpl-35 rpl-36 rpl-36.A rpl-37a rpl-38 rpl-39 rpl-4 rpl-41 rpl-43 rpl-5 rpl-6 rpl-7 rpl-7A rpl-8 rpl-9 rps-0 rps-1 rps-10 rps-11 rps-12 rps-13 rps-14 rps-15 rps-16 rps-17 rps-18 rps-19 rps-2 rps-20 rps-21 rps-22 rps-23 rps-24 rps-25 rps-26 rps-27 rps-28 rps-29 rps-3 rps-4 rps-5 rps-6 rps-7 rps-8 rps-9 ubl-1	Caenorhabditis elegans
Formation of a pool of free 40S subunits	60S ribosomal protein L29 COP9/Signalosome and eIF3 complex-shared subunit 1 Eukaryotic translation initiation factor 3 30 kDa subunit Eukaryotic translation initiation factor 3 subunit A Eukaryotic translation initiation factor 3 subunit B Eukaryotic translation initiation factor 3 subunit C Eukaryotic translation initiation factor 3 subunit D Eukaryotic translation initiation factor 3 subunit E Eukaryotic translation initiation factor 3 subunit F Eukaryotic translation initiation factor 3 subunit G Eukaryotic translation initiation factor 3 subunit H Eukaryotic translation initiation factor 3 subunit I Eukaryotic translation initiation factor 3 subunit K Eukaryotic translation initiation factor 3 subunit L Eukaryotic translation initiation factor 4C Large ribosomal subunit protein P1 Large ribosomal subunit protein P2 Large ribosomal subunit protein eL13 Large ribosomal subunit protein eL14 Large ribosomal subunit protein eL15 Large ribosomal subunit protein eL18 Large ribosomal subunit protein eL19 Large ribosomal subunit protein eL20 Large ribosomal subunit protein eL21 Large ribosomal subunit protein eL22 Large ribosomal subunit protein eL24 Large ribosomal subunit protein eL27 Large ribosomal subunit protein eL28 Large ribosomal subunit protein eL30 Large ribosomal subunit protein eL31 Large ribosomal subunit protein eL32 Large ribosomal subunit protein eL33 Large ribosomal subunit protein eL36 Large ribosomal subunit protein eL38 Large ribosomal subunit protein eL39 Large ribosomal subunit protein eL42 Large ribosomal subunit protein eL43 Large ribosomal subunit protein eL6 Large ribosomal subunit protein eL8 Large ribosomal subunit protein uL10 Large ribosomal subunit protein uL11 Large ribosomal subunit protein uL13 Large ribosomal subunit protein uL14 Large ribosomal subunit protein uL15 Large ribosomal subunit protein uL16 Large ribosomal subunit protein uL18 Large ribosomal subunit protein uL1 Large ribosomal subunit protein uL22 Large ribosomal subunit protein uL23B Large ribosomal subunit protein uL24 Large ribosomal subunit protein uL29 Large ribosomal subunit protein uL2 Large ribosomal subunit protein uL30 Large ribosomal subunit protein uL3 Large ribosomal subunit protein uL4 Large ribosomal subunit protein uL5B Large ribosomal subunit protein uL6 Plectin/S10 N-terminal domain-containing protein Ribosomal Protein, Small subunit Ribosomal protein L37 Small ribosomal subunit protein eS12 Small ribosomal subunit protein eS17 Small ribosomal subunit protein eS19 Small ribosomal subunit protein eS1 Small ribosomal subunit protein eS21 Small ribosomal subunit protein eS24 Small ribosomal subunit protein eS25 Small ribosomal subunit protein eS26 Small ribosomal subunit protein eS27 Small ribosomal subunit protein eS28 Small ribosomal subunit protein eS4 Small ribosomal subunit protein eS6 Small ribosomal subunit protein eS7 Small ribosomal subunit protein eS8 Small ribosomal subunit protein uS10 Small ribosomal subunit protein uS11 Small ribosomal subunit protein uS12 Small ribosomal subunit protein uS13 Small ribosomal subunit protein uS14 Small ribosomal subunit protein uS15 Small ribosomal subunit protein uS17 Small ribosomal subunit protein uS19 Small ribosomal subunit protein uS2 Small ribosomal subunit protein uS3 Small ribosomal subunit protein uS4 Small ribosomal subunit protein uS5 Small ribosomal subunit protein uS7 Small ribosomal subunit protein uS9 Ubiquitin-like domain-containing protein Ubiquitin-like domain-containing protein Ubiquitin-like domain-containing protein Ubiquitin-like protein 1-ribosomal protein eS31 fusion protein	G4S0D4 O01504 O01692 O01802 O01868 O01869 O01974 O02056 O02328 O02639 O17218 O17570 O18240 O18650 O44480 O45226 O45499 O45946 O61820 O62388 P30642 P34334 P34339 P34662 P37165 P46769 P47991 P48150 P48152 P48154 P48156 P48158 P48166 P49041 P49180 P49181 P49196 P49197 P49405 P50880 P51403 P51404 P52814 P52819 P52821 P61866 P90983 P91053 P91055 P91128 P91374 P91913 P91914 Q09533 Q18967 Q19162 Q19706 Q19869 Q19877 Q1XFY9 Q20206 Q20228 Q20647 Q21930 Q22054 Q22716 Q23312 Q27389 Q8WQA8 Q93572 Q94261 Q95QW0 Q95Y04 Q95Y90 Q965S8 Q966C6 Q9BKU5 Q9BL19 Q9N3X2 Q9N4I4 Q9NEN6 Q9TXP0 Q9TXU7 Q9U2A8 Q9U332 Q9XUP3 Q9XVE9 Q9XVF7 Q9XVP0 Q9XWI6 Q9XWP7 Q9XWS4	C16C8.14 C16C8.16 C16C8.20 C37A2.7 CELE_W01D2.1 CELE_Y37E3.8 cif-1 csn-7 egl-45 eif-1.A eif-1.a eif-3.A eif-3.B eif-3.C eif-3.D eif-3.E eif-3.F eif-3.G eif-3.H eif-3.I eif-3.J eif-3.K eif-3.L eif-3.M eif-3.j rla-0 rla-1 rpa-0 rpa-1 rpl-1 rpl-10 rpl-10a rpl-11.2 rpl-12 rpl-13 rpl-14 rpl-15 rpl-16 rpl-17 rpl-18 rpl-19 rpl-2 rpl-20 rpl-21 rpl-22 rpl-23 rpl-24.1 rpl-25.2 rpl-26 rpl-27 rpl-28 rpl-29 rpl-3 rpl-30 rpl-31 rpl-32 rpl-33 rpl-35 rpl-36 rpl-36.A rpl-37a rpl-38 rpl-39 rpl-4 rpl-41 rpl-43 rpl-5 rpl-6 rpl-7 rpl-7A rpl-8 rpl-9 rps-0 rps-1 rps-10 rps-11 rps-12 rps-13 rps-14 rps-15 rps-16 rps-17 rps-18 rps-19 rps-2 rps-20 rps-21 rps-22 rps-23 rps-24 rps-25 rps-26 rps-27 rps-28 rps-29 rps-3 rps-4 rps-5 rps-6 rps-7 rps-8 rps-9 ubl-1	Caenorhabditis elegans
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)	60S ribosomal protein L29 Eukaryotic peptide chain release factor GTP-binding subunit Eukaryotic peptide chain release factor subunit 1 Large ribosomal subunit protein P1 Large ribosomal subunit protein P2 Large ribosomal subunit protein eL13 Large ribosomal subunit protein eL14 Large ribosomal subunit protein eL15 Large ribosomal subunit protein eL18 Large ribosomal subunit protein eL19 Large ribosomal subunit protein eL20 Large ribosomal subunit protein eL21 Large ribosomal subunit protein eL22 Large ribosomal subunit protein eL24 Large ribosomal subunit protein eL27 Large ribosomal subunit protein eL28 Large ribosomal subunit protein eL30 Large ribosomal subunit protein eL31 Large ribosomal subunit protein eL32 Large ribosomal subunit protein eL33 Large ribosomal subunit protein eL36 Large ribosomal subunit protein eL38 Large ribosomal subunit protein eL39 Large ribosomal subunit protein eL42 Large ribosomal subunit protein eL43 Large ribosomal subunit protein eL6 Large ribosomal subunit protein eL8 Large ribosomal subunit protein uL10 Large ribosomal subunit protein uL11 Large ribosomal subunit protein uL13 Large ribosomal subunit protein uL14 Large ribosomal subunit protein uL15 Large ribosomal subunit protein uL16 Large ribosomal subunit protein uL18 Large ribosomal subunit protein uL1 Large ribosomal subunit protein uL22 Large ribosomal subunit protein uL23B Large ribosomal subunit protein uL24 Large ribosomal subunit protein uL29 Large ribosomal subunit protein uL2 Large ribosomal subunit protein uL30 Large ribosomal subunit protein uL3 Large ribosomal subunit protein uL4 Large ribosomal subunit protein uL5B Large ribosomal subunit protein uL6 MIF4G domain-containing protein Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 Plectin/S10 N-terminal domain-containing protein Polyadenylate-binding protein Regulator of nonsense transcripts 1 Ribosomal Protein, Small subunit Ribosomal protein L37 Small ribosomal subunit protein eS12 Small ribosomal subunit protein eS17 Small ribosomal subunit protein eS19 Small ribosomal subunit protein eS1 Small ribosomal subunit protein eS21 Small ribosomal subunit protein eS24 Small ribosomal subunit protein eS25 Small ribosomal subunit protein eS26 Small ribosomal subunit protein eS27 Small ribosomal subunit protein eS28 Small ribosomal subunit protein eS4 Small ribosomal subunit protein eS6 Small ribosomal subunit protein eS7 Small ribosomal subunit protein eS8 Small ribosomal subunit protein uS10 Small ribosomal subunit protein uS11 Small ribosomal subunit protein uS12 Small ribosomal subunit protein uS13 Small ribosomal subunit protein uS14 Small ribosomal subunit protein uS15 Small ribosomal subunit protein uS17 Small ribosomal subunit protein uS19 Small ribosomal subunit protein uS2 Small ribosomal subunit protein uS3 Small ribosomal subunit protein uS4 Small ribosomal subunit protein uS5 Small ribosomal subunit protein uS7 Small ribosomal subunit protein uS9 Ubiquitin-like domain-containing protein Ubiquitin-like domain-containing protein Ubiquitin-like domain-containing protein Ubiquitin-like protein 1-ribosomal protein eS31 fusion protein	A0A486WX07 G4S0D4 O01504 O01692 O01763 O01802 O01868 O01869 O02056 O02639 O16520 O17218 O17570 O18240 O18650 O44480 O45226 O45499 O45622 O45946 O62388 O76512 P34334 P34662 P37165 P46769 P47991 P48150 P48152 P48154 P48156 P48158 P48166 P49041 P49180 P49181 P49196 P49197 P49405 P50880 P51403 P51404 P52814 P52819 P52821 P61866 P90983 P91053 P91055 P91128 P91374 P91913 P91914 Q09533 Q19162 Q19869 Q19877 Q1XFY9 Q20206 Q20228 Q20647 Q21930 Q22054 Q22716 Q23312 Q27389 Q8WQA8 Q93572 Q93594 Q95Y04 Q95Y90 Q966C6 Q9BKU5 Q9BL19 Q9N3X2 Q9N4I4 Q9NEN6 Q9TXP0 Q9U2A8 Q9U302 Q9U332 Q9XVE9 Q9XVF7 Q9XVP0 Q9XWS4	C16C8.14 C16C8.16 C16C8.20 C37A2.7 CELE_W01D2.1 CELE_Y37E3.8 cbp-20 cbp-80 erfa-1 erfa-3 etf-1 ifg-1 ncbp-1 ncbp-2 pab-1 rla-0 rla-1 rpa-0 rpa-1 rpl-1 rpl-10 rpl-10a rpl-11.2 rpl-12 rpl-13 rpl-14 rpl-15 rpl-16 rpl-17 rpl-18 rpl-19 rpl-2 rpl-20 rpl-21 rpl-22 rpl-23 rpl-24.1 rpl-25.2 rpl-26 rpl-27 rpl-28 rpl-29 rpl-3 rpl-30 rpl-31 rpl-32 rpl-33 rpl-35 rpl-36 rpl-36.A rpl-37a rpl-38 rpl-39 rpl-4 rpl-41 rpl-43 rpl-5 rpl-6 rpl-7 rpl-7A rpl-8 rpl-9 rps-0 rps-1 rps-10 rps-11 rps-12 rps-13 rps-14 rps-15 rps-16 rps-17 rps-18 rps-19 rps-2 rps-20 rps-21 rps-22 rps-23 rps-24 rps-25 rps-26 rps-27 rps-28 rps-29 rps-3 rps-4 rps-5 rps-6 rps-7 rps-8 rps-9 smg-2 ubl-1	Caenorhabditis elegans
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)	60S ribosomal protein L29 Eukaryotic peptide chain release factor GTP-binding subunit Eukaryotic peptide chain release factor subunit 1 Large ribosomal subunit protein P1 Large ribosomal subunit protein P2 Large ribosomal subunit protein eL13 Large ribosomal subunit protein eL14 Large ribosomal subunit protein eL15 Large ribosomal subunit protein eL18 Large ribosomal subunit protein eL19 Large ribosomal subunit protein eL20 Large ribosomal subunit protein eL21 Large ribosomal subunit protein eL22 Large ribosomal subunit protein eL24 Large ribosomal subunit protein eL27 Large ribosomal subunit protein eL28 Large ribosomal subunit protein eL30 Large ribosomal subunit protein eL31 Large ribosomal subunit protein eL32 Large ribosomal subunit protein eL33 Large ribosomal subunit protein eL36 Large ribosomal subunit protein eL38 Large ribosomal subunit protein eL39 Large ribosomal subunit protein eL42 Large ribosomal subunit protein eL43 Large ribosomal subunit protein eL6 Large ribosomal subunit protein eL8 Large ribosomal subunit protein uL10 Large ribosomal subunit protein uL11 Large ribosomal subunit protein uL13 Large ribosomal subunit protein uL14 Large ribosomal subunit protein uL15 Large ribosomal subunit protein uL16 Large ribosomal subunit protein uL18 Large ribosomal subunit protein uL1 Large ribosomal subunit protein uL22 Large ribosomal subunit protein uL23B Large ribosomal subunit protein uL24 Large ribosomal subunit protein uL29 Large ribosomal subunit protein uL2 Large ribosomal subunit protein uL30 Large ribosomal subunit protein uL3 Large ribosomal subunit protein uL4 Large ribosomal subunit protein uL5B Large ribosomal subunit protein uL6 MIF4G domain-containing protein MIF4G domain-containing protein Nonsense-mediated mRNA decay factor SMG8 Nonsense-mediated mRNA decay factor SMG9 Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 PIN domain-containing protein Plectin/S10 N-terminal domain-containing protein Polyadenylate-binding protein Probable serine/threonine-protein phosphatase PP2A regulatory subunit Protein CASC3 Protein mago nashi homolog RNA helicase RNA-binding protein rnp-4 RRM domain-containing protein Regulator of nonsense transcripts 1 Ribosomal Protein, Small subunit Ribosomal protein L37 Serine/threonine-protein kinase smg-1 Serine/threonine-protein phosphatase 2A catalytic subunit Serine/threonine-protein phosphatase 2A regulatory subunit sur-6 Small ribosomal subunit protein eS12 Small ribosomal subunit protein eS17 Small ribosomal subunit protein eS19 Small ribosomal subunit protein eS1 Small ribosomal subunit protein eS21 Small ribosomal subunit protein eS24 Small ribosomal subunit protein eS25 Small ribosomal subunit protein eS26 Small ribosomal subunit protein eS27 Small ribosomal subunit protein eS28 Small ribosomal subunit protein eS4 Small ribosomal subunit protein eS6 Small ribosomal subunit protein eS7 Small ribosomal subunit protein eS8 Small ribosomal subunit protein uS10 Small ribosomal subunit protein uS11 Small ribosomal subunit protein uS12 Small ribosomal subunit protein uS13 Small ribosomal subunit protein uS14 Small ribosomal subunit protein uS15 Small ribosomal subunit protein uS17 Small ribosomal subunit protein uS19 Small ribosomal subunit protein uS2 Small ribosomal subunit protein uS3 Small ribosomal subunit protein uS4 Small ribosomal subunit protein uS5 Small ribosomal subunit protein uS7 Small ribosomal subunit protein uS9 UPF3 domain-containing protein Ubiquitin-like domain-containing protein Ubiquitin-like domain-containing protein Ubiquitin-like domain-containing protein Ubiquitin-like protein 1-ribosomal protein eS31 fusion protein	A0A486WX07 C2BR97 G4S0D4 G5EDE4 G5EDR3 G5EGK8 O01504 O01510 O01692 O01763 O01802 O01868 O01869 O02056 O02639 O16520 O17218 O17570 O18240 O18650 O44480 O45226 O45499 O45622 O45946 O62301 O62388 O76512 P34334 P34662 P37165 P46769 P47991 P48150 P48152 P48154 P48156 P48158 P48166 P49029 P49041 P49180 P49181 P49196 P49197 P49405 P50880 P51403 P51404 P52814 P52819 P52821 P61866 P90983 P91053 P91055 P91128 P91374 P91913 P91914 Q09533 Q09543 Q19162 Q19869 Q19877 Q1XFY9 Q20206 Q20228 Q20647 Q21155 Q21832 Q21930 Q22054 Q22716 Q23312 Q27389 Q8WQA8 Q8WQF3 Q93572 Q93594 Q95Y04 Q95Y90 Q966C6 Q9BKU5 Q9BL19 Q9BL61 Q9BL68 Q9N3X2 Q9N4I4 Q9NEN6 Q9TXP0 Q9U2A8 Q9U302 Q9U332 Q9XVE9 Q9XVF7 Q9XVP0 Q9XWJ1 Q9XWS4	C16C8.14 C16C8.16 C16C8.20 C37A2.7 CELE_W01D2.1 CELE_Y37E3.8 RBM8 Y14 casc-3 cbp-20 cbp-80 eif-4A3 erfa-1 erfa-3 etf-1 ifg-1 let-92 mag-1 ncbp-1 ncbp-2 paa-1 pab-1 rla-0 rla-1 rnp-4 rnp-5 rpa-0 rpa-1 rpl-1 rpl-10 rpl-10a rpl-11.2 rpl-12 rpl-13 rpl-14 rpl-15 rpl-16 rpl-17 rpl-18 rpl-19 rpl-2 rpl-20 rpl-21 rpl-22 rpl-23 rpl-24.1 rpl-25.2 rpl-26 rpl-27 rpl-28 rpl-29 rpl-3 rpl-30 rpl-31 rpl-32 rpl-33 rpl-35 rpl-36 rpl-36.A rpl-37a rpl-38 rpl-39 rpl-4 rpl-41 rpl-43 rpl-5 rpl-6 rpl-7 rpl-7A rpl-8 rpl-9 rps-0 rps-1 rps-10 rps-11 rps-12 rps-13 rps-14 rps-15 rps-16 rps-17 rps-18 rps-19 rps-2 rps-20 rps-21 rps-22 rps-23 rps-24 rps-25 rps-26 rps-27 rps-28 rps-29 rps-3 rps-4 rps-5 rps-6 rps-7 rps-8 rps-9 smg-1 smg-2 smg-3 smg-4 smg-6 smg-8 smg-9 sur-6 ubl-1	Caenorhabditis elegans

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