GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **26 - 50** of **499** in total

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Pathway Name	Protein Name	UniProt ID ▼	Gene Symbol	Organism	GlyTouCan ID
Other semaphorin interactions	Sema domain-containing protein Sema domain-containing protein Semaphorin-1A Semaphorin-2A Tyrosine-protein phosphatase Lar-like	Q17330 Q95XP4 Q9BMN8 Q9TYS4 U4PRY7	mab-20 plx-1 ptp-3 sema-1a smp-1 smp-2	Caenorhabditis elegans
N-glycan trimming and elongation in the cis-Golgi	Putative alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase	Q11068	gly-13	Caenorhabditis elegans
Glycerophospholipid biosynthesis	Uncharacterized protein F52C9.3	Q10123	F52C9.3	Caenorhabditis elegans
IRE1alpha activates chaperones	Serine/threonine-protein kinase/endoribonuclease ire-1	Q09499	ire-1	Caenorhabditis elegans
Nucleotide catabolism	Deoxynucleoside triphosphate triphosphohydrolase sahd-1	Q09374	sahd-1	Caenorhabditis elegans
Clearance of dopamine	Sodium-dependent dopamine transporter	Q03614	dat-1	Caenorhabditis elegans
Glycerophospholipid catabolism	GP-PDE domain-containing protein Patatin-like phospholipase domain-containing protein ZK370.4 Putative patatin-like phospholipase domain-containing protein M110.7 glycerophosphocholine cholinephosphodiesterase	Q02331 Q21534 Q22129 Q9UAW8	CELE_T03G6.3 CELE_T12B3.3 M110.7 ZK370.4	Caenorhabditis elegans
Digestion of dietary carbohydrate	Alpha-amylase Glycoside hydrolase family 1 protein P-type domain-containing protein P-type domain-containing protein Probable endochitinase	P91982 Q11174 Q18758 Q19004 Q21750	C50B6.7 aagr-1 aagr-2 cht-1 klo-1	Caenorhabditis elegans	G58161NS G74621DY G80384UV G93924TT G96370VA
Nicotinate metabolism	Glutamine-dependent NAD(+) synthetase NAD kinase 2, mitochondrial Nicotinamide-nucleotide adenylyltransferase Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 2	P91851 Q9XXI5 Q9XXK6 Q9XXM2	nadk-2 nmat-1 nmat-2 qns-1	Caenorhabditis elegans
Activation of NF-kappaB in B cells	Protein kinase C-like 2	P90980	kin-11 pkc-2	Caenorhabditis elegans
Response to elevated platelet cytosolic Ca2+	Protein kinase C-like 2	P90980	kin-11 pkc-2	Caenorhabditis elegans
Acetylcholine regulates insulin secretion	Protein kinase C-like 2	P90980	kin-11 pkc-2	Caenorhabditis elegans
Progressive trimming of alpha-1,2-linked mannose residues from Man9/8/7GlcNAc2 to produce Man5GlcNAc2	Mannosyl-oligosaccharide 1,2-alpha-mannosidase C52E4.5 alpha-1,2-Mannosidase	P90787 Q18788	C52E4.5 mans-1	Caenorhabditis elegans	G70323CJ
TP53 regulates transcription of several additional cell death genes whose specific roles in p53-dependent apoptosis remain uncertain	Geranylgeranyl transferase type-2 subunit alpha Probable geranylgeranyl transferase type-2 subunit beta Rab proteins geranylgeranyltransferase component A 1	P41992 Q9BKQ5 Q9TYY0	CELE_M57.2 ggtb-1 rep-1	Caenorhabditis elegans
PKA-mediated phosphorylation of key metabolic factors	Protein WBSCR14 homolog	P41846	mio mml-1	Caenorhabditis elegans
Frs2-mediated activation	14-3-3-like protein 1 14-3-3-like protein 2 Dual specificity mitogen-activated protein kinase kinase mek-2 Mitogen-activated protein kinase mpk-1 Raf homolog serine/threonine-protein kinase Ras-related protein Rap-1	P39745 P41932 Q07292 Q10664 Q18246 Q20655	ftt-1 ftt-2 lin-45 mek-2 mpk-1 par-5 raf-1 rap-1 sur-1	Caenorhabditis elegans
VEGFR2 mediated cell proliferation	Protein kinase C-like 1 Protein kinase C-like 2 Protein kinase C-like 3 Sphingosine kinase 1 non-specific serine/threonine protein kinase	P34722 P90980 Q18425 Q19266 Q9UA62	CELE_W04B5.5 aPKC kin-11 pkc-2 pkc-3 sphk-1 tag-274 tpa-1	Caenorhabditis elegans
Calmodulin induced events	EF-hand domain-containing protein G protein-coupled receptor kinase 2 Protein kinase C-like 1 Protein kinase C-like 2	P34722 P90980 Q09639 Q18136	cal-5 grk-2 kin-11 pkc-2 tpa-1	Caenorhabditis elegans
DAG and IP3 signaling	Protein kinase C-like 1 Protein kinase C-like 1B	P34722 P34885	kin-13 pkc-1 tpa-1 ttx-4	Caenorhabditis elegans
VLDLR internalisation and degradation	AP complex subunit beta AP complex subunit sigma AP-2 complex subunit alpha AP-2 complex subunit mu Clathrin light chain EGF-like domain-containing protein Probable clathrin heavy chain 1	P34574 P35603 P90961 Q19123 Q22601 Q7JP80 Q9N4F3	ap50 apa-2 apb-1 aps-2 chc-1 clic-1 dpy-23 gldi-2	Caenorhabditis elegans
Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell	Integrin alpha pat-2 Uncharacterized integrin beta-like protein C05D9.3	P34446 Q9GYK2	C05D9.3 pat-2	Caenorhabditis elegans
Fibronectin matrix formation	Fibronectin type-III domain-containing protein Integrin alpha pat-2 Uncharacterized integrin beta-like protein C05D9.3	P34446 Q18096 Q9GYK2	C05D9.3 C18E9.7 pat-2	Caenorhabditis elegans
Intestinal lipid absorption	NPC intracellular cholesterol transporter 1 homolog 1 NPC intracellular cholesterol transporter 1 homolog 2	P34389 Q19127	ncr-1 ncr-2 npc-1 npc-2	Caenorhabditis elegans
KSRP (KHSRP) binds and destabilizes mRNA	14-3-3-like protein 1 14-3-3-like protein 2 K Homology domain-containing protein K Homology domain-containing protein K Homology domain-containing protein K Homology domain-containing protein KH domain-containing protein C06G4.1 Serine/threonine-protein kinase akt-1 Serine/threonine-protein kinase akt-2	P34307 P41932 P91393 Q17936 Q17941 Q20655 Q23487 Q9BLA0 Q9XTG7	C06G4.1 akt-1 akt-2 ftt-1 ftt-2 fubl-1 fubl-2 fubl-3 fubl-4 fubp-3.1 fubp-3.2 fubp-3.3 fubp-3.4 par-5	Caenorhabditis elegans
Nicotinamide salvaging	ATP-dependent (S)-NAD(P)H-hydrate dehydratase NAD(P)H-hydrate epimerase NAD-capped RNA hydrolase ndx-9 Nicotinamide N-methyltransferase Nicotinate phosphoribosyltransferase Organic cation transporter 1 Sodium-dependent multivitamin transporter	P32740 P34254 Q19427 Q23616 Q95XX1 Q9U539 Q9XW15	R107.2 Y18D10A.3 anmt-1 ndx-9 nprt-1 oct-1 slc-5A12	Caenorhabditis elegans

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