GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome November 12, 2024
ECODAB April 1, 2019
Displaying entries 26 - 50 of 124 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism ▲ GlyTouCan ID
Role of phospholipids in phagocytosis
  • DDB_G0271516
  • DDB_G0275547
  • DDB_G0284155
  • DDB_G0284367
  • DDB_G0288795
  • akt
  • dagA
  • pkbA
  • pld1
  • pld3
  • pldA
  • pldB
  • pldC
  • pldY
  • pldZ
Dictyostelium discoideum
TP53 Regulates Metabolic Genes
  • DDB_G0274833
  • DDB_G0279427
  • DDB_G0280527
  • DDB_G0283567
  • DDB_G0288795
  • DDB_G0291948
  • DDB_G0292160
  • akt
  • ampka
  • dagA
  • fttB
  • g6pd-1
  • g6pd-2
  • g6pi
  • gpi
  • gsr
  • lst8
  • mapbpip
  • mrkB
  • pgi
  • pkbA
  • prdx4
  • prdx5
  • prkaa
  • prkab
  • prkag
  • ragA
  • ragC
  • raptor
  • rheb
  • snfA
  • tor
  • trx3
  • trx4
  • trxC
  • trxD
  • zwf
Dictyostelium discoideum
Glycolysis
  • enoA
  • enoB
  • fba
  • g6pi
  • glk
  • gniA
  • gnpda1
  • gpdA
  • gpi
  • gpmA
  • nagB2
  • pgam
  • pgi
  • pgkA
  • pgmB
  • pyk
  • tpiA
Dictyostelium discoideum
Choline catabolism
  • DDB_G0276821
  • DDB_G0288717
  • chdh
  • ctl2
  • slc44a2
Dictyostelium discoideum
Regulation of HSF1-mediated heat shock response
  • DDB_G0278179
  • DDB_G0281165
  • DDB_G0281747
  • DDB_G0285709
  • DDB_G0293674
  • DDB_G0293678
  • bip2
  • erk1
  • erkA
  • fttB
  • gsk3
  • gskA
  • hsc70
  • hsp70
  • hspB
  • hspE-1
  • hspE-2
  • hspH
  • mhsp70
Dictyostelium discoideum
Progressive trimming of alpha-1,2-linked mannose residues from Man9/8/7GlcNAc2 to produce Man5GlcNAc2
  • DDB_G0268754
  • DDB_G0284391
  • DDB_G0284393
  • DDB_G0284395
  • DDB_G0292918
Dictyostelium discoideum
Erythrocytes take up carbon dioxide and release oxygen
  • DDB_G0290691
  • aqpA
  • rhgB
  • wacA
Dictyostelium discoideum
Synthesis of glycosylphosphatidylinositol (GPI)
  • DDB_G0276251
  • DDB_G0280891
  • pigB
  • pigF
  • pigN
  • pigX
  • pigl
  • pigm
  • pigw
  • smp3
Dictyostelium discoideum
Thyroxine biosynthesis
  • noxA
  • noxB
  • noxC
  • poxA
Dictyostelium discoideum
Antimicrobial peptides
  • DDB_G0271242
  • DDB_G0278563
Dictyostelium discoideum
Ion homeostasis
  • DDB_G0289473
  • iplA
  • patA
  • redB
Dictyostelium discoideum
Condensation of Prometaphase Chromosomes
  • DDB_G0281419
  • DDB_G0286481
  • DDB_G0292066
  • DDB_G0293984
  • casK
  • csnk2b
  • smc2
Dictyostelium discoideum
Regulation of PTEN stability and activity
  • DDB_G0267906
  • DDB_G0275865
  • DDB_G0281657
  • DDB_G0283983
  • DDB_G0285063
  • DDB_G0285967
  • DDB_G0286481
  • DDB_G0288795
  • DDB_G0292920
  • M4
  • adrm1-1
  • adrm1-2
  • akt
  • casK
  • cnrN
  • csnk2b
  • dagA
  • dapA
  • pkbA
  • prdD
  • prdE
  • prtC
  • prtD
  • psmA1
  • psmA2
  • psmA3
  • psmA4
  • psmA5
  • psmA6
  • psmA7
  • psmB2
  • psmB3
  • psmB4-1
  • psmB4-2
  • psmB5
  • psmB6
  • psmB7
  • psmC1
  • psmC2
  • psmC3
  • psmC4
  • psmC6
  • psmD1
  • psmD11
  • psmD12
  • psmD13
  • psmD14
  • psmD2
  • psmD3
  • psmD6
  • psmD7
  • psmD8-1
  • psmD8-2
  • pteN
  • ptenA
  • sks1
  • tbp2
  • tbpB
  • ubpA
  • ubqB
  • ubqC
  • ubqF
  • ubqG
  • ubqH
  • ubqI
  • ubqJ
  • ubqO
  • usp5
  • veg116
Dictyostelium discoideum
Zinc influx into cells by the SLC39 gene family
  • zntA
  • zntD
Dictyostelium discoideum
N-glycan trimming in the ER and Calnexin/Calreticulin cycle
  • DDB_G0268520
  • ubqB
  • ubqC
  • ubqF
  • ubqG
  • ubqH
  • ubqI
  • ubqJ
  • ubqO
  • veg116
Dictyostelium discoideum
Recycling of bile acids and salts
  • abcB2
  • abcB3
  • abcB6
  • abcB7
  • abcC10
  • abcC12
  • abcC3
  • abcC5
  • abcC8
  • tagA
  • tagB
  • tagC
  • tagD
Dictyostelium discoideum
Synthesis of IP3 and IP4 in the cytosol
  • DDB_G0275865
  • DDB_G0281737
  • DDB_G0285967
  • DDB_G0292920
  • Dd5P1
  • Dd5P3
  • Dd5P4
  • ITPK1
  • calA
  • calB
  • camA
  • cnrN
  • mlcD
  • pipA
  • plc
  • pld3
  • pldY
  • pldZ
  • pteN
  • ptenA
Dictyostelium discoideum
G alpha (i) signalling events
  • DDB_G0270858
  • DDB_G0273033
  • DDB_G0278897
  • DDB_G0282583
  • DDB_G0286173
  • DDB_G0286817
  • GluPR
  • gpa9
  • gpaI
  • gpbA
  • grlE
  • grlP
  • grlQ
Dictyostelium discoideum
Antigen processing: Ubiquitination & Proteasome degradation
  • DDB_G0268504
  • DDB_G0269704
  • DDB_G0270000
  • DDB_G0271372
  • DDB_G0271726
  • DDB_G0271956
  • DDB_G0272202
  • DDB_G0272218
  • DDB_G0273381
  • DDB_G0273419
  • DDB_G0273451
  • DDB_G0273573
  • DDB_G0274897
  • DDB_G0275145
  • DDB_G0277011
  • DDB_G0277047
  • DDB_G0277053
  • DDB_G0277075
  • DDB_G0277249
  • DDB_G0277429
  • DDB_G0278049
  • DDB_G0278075
  • DDB_G0278671
  • DDB_G0278981
  • DDB_G0279003
  • DDB_G0279093
  • DDB_G0279435
  • DDB_G0279463
  • DDB_G0280089
  • DDB_G0280091
  • DDB_G0280347
  • DDB_G0280581
  • DDB_G0280895
  • DDB_G0281369
  • DDB_G0281657
  • DDB_G0281679
  • DDB_G0281833
  • DDB_G0282391
  • DDB_G0282479
  • DDB_G0283667
  • DDB_G0283893
  • DDB_G0283983
  • DDB_G0284145
  • DDB_G0284325
  • DDB_G0285063
  • DDB_G0285261
  • DDB_G0285581
  • DDB_G0285797
  • DDB_G0286289
  • DDB_G0286387
  • DDB_G0286991
  • DDB_G0287221
  • DDB_G0288345
  • DDB_G0288683
  • DDB_G0289043
  • DDB_G0289099
  • DDB_G0290547
  • DDB_G0290641
  • DDB_G0291131
  • DDB_G0291612
  • DDB_G0291902
  • DDB_G0291984
  • DDB_G0292144
  • DDB_G0292302
  • DDB_G0292362
  • DDB_G0292586
  • DDB_G0293756
  • DDB_G0295713
  • M4
  • adrm1-1
  • adrm1-2
  • anapc1
  • anapc10
  • anapc11
  • anapc2
  • anapc3
  • anapc4
  • anapc5
  • anapc6
  • anapc7
  • anapc8
  • apc1
  • apc10
  • apc11
  • apc2
  • apc3
  • apc4
  • apc5
  • apc6
  • apc7
  • apc8
  • apg7
  • atg7
  • cblA-1
  • cblA-2
  • cdc16
  • cdc20
  • cdc23
  • cdc26
  • cdc27
  • cdh1
  • cnrM
  • cul1
  • cul2
  • cul3
  • cul5
  • culA
  • culB
  • culC
  • culE
  • dapA
  • fp21A
  • fp21B
  • fpa1
  • fpa1A
  • fpa1B
  • fpa2
  • fpaA
  • fpaB-1
  • fpaB-2
  • gacGG
  • hbx1
  • mip1-1
  • mip1-2
  • mtpn
  • nosA
  • prdD
  • prdE
  • prtC
  • prtD
  • psaA
  • psaB
  • psmA1
  • psmA2
  • psmA3
  • psmA4
  • psmA5
  • psmA6
  • psmA7
  • psmB2
  • psmB3
  • psmB4-1
  • psmB4-2
  • psmB5
  • psmB6
  • psmB7
  • psmC1
  • psmC2
  • psmC3
  • psmC4
  • psmC6
  • psmD1
  • psmD11
  • psmD12
  • psmD13
  • psmD14
  • psmD2
  • psmD3
  • psmD6
  • psmD7
  • psmD8-1
  • psmD8-2
  • rbrA
  • rbx1
  • rnf160
  • skp1A
  • skp1B
  • sks1
  • tbp2
  • tbpB
  • tceb1
  • tirA
  • triA
  • uae1
  • uba1
  • uba3
  • uba5
  • ubc2
  • ubcB
  • ubcC
  • ubch10
  • ube1c
  • ube2c
  • ube2j2
  • ube2m
  • ube2n
  • ube2s
  • ube2v
  • ube2w
  • ube3a
  • ubqB
  • ubqC
  • ubqF
  • ubqG
  • ubqH
  • ubqI
  • ubqJ
  • ubqO
  • veg116
  • warA
  • wri
Dictyostelium discoideum
Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol
  • DDB_G0268562
  • abcB2
  • abcB3
  • abcB6
  • abcB7
  • acox1
  • alrA
  • alrB
  • alrC
  • mfe2
  • mfeB
  • tagA
  • tagB
  • tagC
  • tagD
Dictyostelium discoideum
Passive transport by Aquaporins
  • DDB_G0290691
  • aqpA
  • aqpB
  • wacA
Dictyostelium discoideum
Receptor Mediated Mitophagy
  • DDB_G0277699
  • DDB_G0286481
  • DDB_G0290491
  • apg1
  • apg12
  • apg5
  • apg8
  • atg1
  • atg12
  • atg5
  • atg8
  • casK
  • csnk2b
Dictyostelium discoideum
Fructose biosynthesis
  • alrB
Dictyostelium discoideum
Elevation of cytosolic Ca2+ levels
  • iplA
  • p2xA
  • p2xB
  • p2xC
  • p2xD
  • p2xE
Dictyostelium discoideum
Acyl chain remodelling of PE
  • DDB_G0278541
  • DDB_G0283551
  • plbD
Dictyostelium discoideum

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Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

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