GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 51 - 75 of 128 in total
Pathway Name ▼ Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
Neurotransmitter clearance
  • D2
  • DDB_G0276969
  • DDB_G0279717
  • DDB_G0285555
  • DDB_G0291344
  • cryS
Dictyostelium discoideum
Negative regulation of MAPK pathway
  • DDB_G0267566
  • DDB_G0267686
  • DDB_G0268876
  • DDB_G0270200
  • DDB_G0271350
  • DDB_G0271860
  • DDB_G0272092
  • DDB_G0273199
  • DDB_G0282963
  • DDB_G0290471
  • DDB_G0291516
  • DDB_G0291664
  • DDB_G0292880
  • RacGEF
  • erk1
  • erkA
  • kxcB
  • mpl1
  • mpl2
  • mpl3
  • mrkC
  • phg2
  • ptp1
  • ptp2
  • ptp3
  • ptpA1-1
  • ptpA1-2
  • ptpB
  • ptpC
  • spkA-1
  • spkA-2
Dictyostelium discoideum
Neddylation
  • DDB_G0269686
  • DDB_G0270220
  • DDB_G0271372
  • DDB_G0272016
  • DDB_G0272218
  • DDB_G0272666
  • DDB_G0272951
  • DDB_G0277011
  • DDB_G0277249
  • DDB_G0278671
  • DDB_G0279093
  • DDB_G0280581
  • DDB_G0280895
  • DDB_G0284157
  • DDB_G0284369
  • DDB_G0285813
  • DDB_G0286387
  • DDB_G0286565
  • DDB_G0288453
  • DDB_G0288597
  • DDB_G0289099
  • DDB_G0290025
  • DDB_G0291902
  • DDB_G0292144
  • DDB_G0292302
  • M4
  • appbp1
  • cand1
  • cdcD
  • cnrM
  • commd1
  • commd10
  • commd2
  • commd3
  • commd4
  • commd5
  • commd6
  • commd7
  • commd8
  • csn1
  • csn2
  • csn3
  • csn4
  • csn5
  • csn6
  • csn7
  • csn8
  • cul1
  • cul2
  • cul3
  • cul4
  • cul5
  • culA
  • culB
  • culC
  • culD
  • culE
  • dapA
  • ddb1
  • dpr1
  • ercc8
  • fp21A
  • fp21B
  • fpa1
  • fpa1A
  • fpa1B
  • fpa2
  • fpaA
  • fpaB-1
  • fpaB-2
  • hbx1
  • mtpn
  • nae1
  • nedd8
  • npl4
  • nploc4
  • prdD
  • prdE
  • prtC
  • prtD
  • psmA1
  • psmA2
  • psmA3
  • psmA4
  • psmA5
  • psmA6
  • psmA7
  • psmB2
  • psmB3
  • psmB4-1
  • psmB4-2
  • psmB5
  • psmB6
  • psmB7
  • psmC1
  • psmC2
  • psmC3
  • psmC4
  • psmC6
  • psmD1
  • psmD10
  • psmD11
  • psmD12
  • psmD13
  • psmD14
  • psmD2
  • psmD3
  • psmD4
  • psmD6
  • psmD7
  • psmD8-1
  • psmD8-2
  • psmD9
  • psmE3
  • psmE4
  • psmF1
  • rbbD
  • rbbE
  • rbx1
  • repE
  • skp1A
  • skp1B
  • sks1
  • tbp2
  • tbpB
  • tceb1
  • triA
  • uba3
  • ube1c
  • ube2m
  • ubqB
  • ubqC
  • ubqF
  • ubqG
  • ubqH
  • ubqI
  • ubqJ
  • ubqO
  • ubxd7
  • uch1
  • uchl
  • ufd1
  • veg116
  • warA
  • wdr23
  • wdr5
  • wdr68
  • wdsof1
  • wri
Dictyostelium discoideum
N-glycan trimming in the ER and Calnexin/Calreticulin cycle
  • DDB_G0268520
  • ubqB
  • ubqC
  • ubqF
  • ubqG
  • ubqH
  • ubqI
  • ubqJ
  • ubqO
  • veg116
Dictyostelium discoideum
N-glycan trimming and elongation in the cis-Golgi
  • gnt3
Dictyostelium discoideum
Mitochondrial ABC transporters
  • abcB2
  • abcB3
  • abcB5
  • abcB6
  • abcB7
  • tagA
  • tagB
  • tagC
  • tagD
Dictyostelium discoideum
Metal ion SLC transporters
  • DDB_G0282067
  • DDB_G0285545
  • nramp
  • nramp1
  • slc11a1
Dictyostelium discoideum
Metabolism of Angiotensinogen to Angiotensins
  • D2
  • DDB_G0276969
  • DDB_G0279717
  • DDB_G0285555
  • DDB_G0291344
  • cryS
Dictyostelium discoideum
Macroautophagy
  • DDB_G0269162
  • DDB_G0269272
  • DDB_G0269448
  • DDB_G0271610
  • DDB_G0274833
  • DDB_G0278311
  • DDB_G0281845
  • DDB_G0283567
  • DDB_G0283753
  • DDB_G0284481
  • DDB_G0288175
  • DDB_G0288287
  • DDB_G0288731
  • DDB_G0289807
  • DDB_G0290005
  • DDB_G0290491
  • DDB_G0291948
  • DDB_G0292160
  • DDB_G0293258
  • ampka
  • apg1
  • apg12
  • apg3
  • apg4-1
  • apg4-2
  • apg5
  • apg6B
  • apg7
  • apg8
  • apg9
  • atg1
  • atg12
  • atg18
  • atg3
  • atg4-1
  • atg4-2
  • atg5
  • atg6B
  • atg7
  • atg8
  • atg9
  • chmp2a2
  • chmp3
  • chmp4
  • chmp6
  • chmp7
  • lst8
  • mapbpip
  • mrkB
  • pats1
  • pik3r4
  • pik5
  • pikE
  • prkaa
  • prkab
  • prkag
  • ragA
  • ragC
  • raptor
  • rheb
  • snf7
  • snfA
  • tipD
  • tor
  • vps15
  • vps20
  • vps24
  • vps2B
  • vps32
  • wdr45l
  • wipi2
Dictyostelium discoideum
MHC class II antigen presentation
  • CP1
  • CP2
  • CP3
  • CP4
  • CP5
  • CP6
  • CP7
  • CatD
  • DDB_G0272742
  • DDB_G0274385
  • DDB_G0278401
  • DDB_G0282991
  • DDB_G0286055
  • DDB_G0291191
  • cfaD
  • cprA
  • cprB
  • cprC
  • cprD
  • cprE
  • cprF
  • cprG
  • ctsB
  • ctsD
  • gmsA
Dictyostelium discoideum
Lysosomal oligosaccharide catabolism
  • DDB_G0275917
  • manA
  • manB
  • manC
  • manD
  • manE
  • manF
  • manG
Dictyostelium discoideum
Linoleic acid (LA) metabolism
  • DDB_G0270312
  • DDB_G0271066
  • DDB_G0272012
  • DDB_G0274669
  • DDB_G0277569
  • DDB_G0288001
  • abcD3
  • eloA
  • fcsA
  • fcsB
  • sre1
Dictyostelium discoideum
Lewis blood group biosynthesis
  • DDB_G0270208
  • fut1
  • fut10
  • fut11
  • fut2
  • fut3
  • fut4
  • fut5
  • fut6
  • fut7
  • fut9
Dictyostelium discoideum
Lactose synthesis
  • DDB_G0277773
  • symA
Dictyostelium discoideum
LDL clearance
  • DDB_G0270454
  • DDB_G0276657
  • DDB_G0278295
  • DDB_G0281675
  • DDB_G0282107
  • DDB_G0282109
  • DDB_G0282177
  • DDB_G0282179
  • DDB_G0283413
  • DDB_G0283819
  • DDB_G0285639
  • DDB_G0287185
  • DDB_G0291344
  • ap1b1
  • ap2a1-1
  • ap2a1-2
  • ap2s1
  • apm1
  • apm2
  • apmA
  • chcA
  • clc
  • clcA
  • ctnC
Dictyostelium discoideum
Keratan sulfate degradation
  • glb1
  • hexa1
  • hexa2
  • hexb1
  • hexb2
  • nagA
  • nagE
Dictyostelium discoideum
KEAP1-NFE2L2 pathway
  • DDB_G0270098
  • DDB_G0271372
  • DDB_G0272951
  • DDB_G0279427
  • DDB_G0290491
  • M4
  • apg8
  • atg8
  • cdcD
  • cul3
  • culC
  • dapA
  • dpr1
  • npl4
  • nploc4
  • prdD
  • prdE
  • prtC
  • prtD
  • psmA1
  • psmA2
  • psmA3
  • psmA4
  • psmA5
  • psmA6
  • psmA7
  • psmB2
  • psmB3
  • psmB4-1
  • psmB4-2
  • psmB5
  • psmB6
  • psmB7
  • psmC1
  • psmC2
  • psmC3
  • psmC4
  • psmC6
  • psmD1
  • psmD10
  • psmD11
  • psmD12
  • psmD13
  • psmD14
  • psmD2
  • psmD3
  • psmD4
  • psmD6
  • psmD7
  • psmD8-1
  • psmD8-2
  • psmD9
  • psmE3
  • psmE4
  • psmF1
  • rbx1
  • sks1
  • tbp2
  • tbpB
  • ubqB
  • ubqC
  • ubqF
  • ubqG
  • ubqH
  • ubqI
  • ubqJ
  • ubqO
  • ubxd7
  • ufd1
  • veg116
Dictyostelium discoideum
Iron uptake and transport
  • abcG12
  • abcG22
  • abcG24
  • abcG4
  • abcG7
  • abcG8
  • acnA
  • aco1
  • cand1
  • cul2
  • culB
  • fp21A
  • fp21B
  • fpa1
  • fpa1A
  • fpa1B
  • fpa2
  • fpaA
  • fpaB-1
  • fpaB-2
  • nedd8
  • nramp
  • nramp1
  • skp1A
  • skp1B
  • slc11a1
  • ubqB
  • ubqC
  • ubqF
  • ubqG
  • ubqH
  • ubqI
  • ubqJ
  • ubqO
  • veg116
Dictyostelium discoideum
Ion influx/efflux at host-pathogen interface
  • nramp
  • nramp1
  • slc11a1
Dictyostelium discoideum
Ion homeostasis
  • DDB_G0289473
  • iplA
  • patA
  • redB
Dictyostelium discoideum
Intracellular metabolism of fatty acids regulates insulin secretion
  • lmpA
  • lmpB
  • lmpC
Dictyostelium discoideum
Intestinal hexose absorption
  • DDB_G0277773
  • symA
Dictyostelium discoideum
Interleukin-4 and Interleukin-13 signaling
  • DDB_G0270046
  • DDB_G0279767
  • DDB_G0290073
  • dstA
  • dstB
  • dstC
  • dstD
  • grp94
  • stat5
  • statA
  • statB
  • statC
Dictyostelium discoideum
IRE1alpha activates chaperones
  • ireA
Dictyostelium discoideum
Hydrolysis of LPC
  • plbD
Dictyostelium discoideum

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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