GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 101 - 125 of 128 in total
Pathway Name ▼ Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
Digestion
  • DDB_G0291472
Dictyostelium discoideum
Detoxification of Reactive Oxygen Species
  • DDB_G0273153
  • DDB_G0282517
  • DDB_G0284939
  • cat
  • catA
  • ccs
  • ccsA
  • cytC
  • gsr
  • gsta1
  • gsta2-1
  • gsta2-2
  • gsta3
  • gsta4
  • gsta5
  • noxA
  • noxB
  • noxC
  • prdx4
  • prdx5
  • sod2
  • sodB
  • sodC
  • sodD
  • sodE
  • sodF
  • trx3
  • trx4
  • trxC
  • trxD
Dictyostelium discoideum
Degradation of the extracellular matrix
  • CP2
  • CP3
  • CP4
  • CP5
  • CP6
  • CP7
  • DDB_G0272742
  • DDB_G0278401
  • DDB_G0282991
  • cfaD
  • cprB
  • cprC
  • cprD
  • cprE
  • cprF
  • cprG
Dictyostelium discoideum
DARPP-32 events
  • Pde4
  • pde2
  • pde3
  • regA
Dictyostelium discoideum
DAG and IP3 signaling
  • DDB_G0288795
  • akt
  • dagA
  • pkbA
Dictyostelium discoideum
Cyclin D associated events in G1
  • DDB_G0279813
  • E2F
  • PP2A
  • PP2Ac
  • Rb
  • cks1
  • cul2
  • culB
  • fp21A
  • fp21B
  • fpa1
  • fpa1A
  • fpa1B
  • fpa2
  • fpaA
  • fpaB-1
  • fpaB-2
  • pho2a
  • phr2aB
  • pppA
  • pppD
  • rblA
  • rcdB
  • skp1A
  • skp1B
  • tfdp2
  • ubqB
  • ubqC
  • ubqF
  • ubqG
  • ubqH
  • ubqI
  • ubqJ
  • ubqO
  • veg116
  • veg124
Dictyostelium discoideum
Condensation of Prometaphase Chromosomes
  • DDB_G0281419
  • DDB_G0286481
  • DDB_G0292066
  • DDB_G0293984
  • casK
  • csnk2b
  • smc2
Dictyostelium discoideum
Clathrin-mediated endocytosis
  • DDB_G0267588
  • DDB_G0271676
  • DDB_G0271812
  • DDB_G0272638
  • DDB_G0274261
  • DDB_G0274695
  • DDB_G0279059
  • DDB_G0279493
  • DDB_G0280377
  • DDB_G0281155
  • DDB_G0281235
  • DDB_G0286115
  • DDB_G0286699
  • DDB_G0292190
  • DDB_G0292610
  • PIPkinA
  • abcC1
  • abcC13
  • abcC14
  • abcC15
  • abcC2
  • abcC6
  • abcC7
  • abcC9
  • ap1b1
  • ap2a1-1
  • ap2a1-2
  • ap2s1
  • apm1
  • apm2
  • apmA
  • chcA
  • clc
  • clcA
  • clmA
  • eps15
  • gacBB
  • lmpC
  • mgp1
  • mrrA
  • pik1
  • pik2
  • pik3
  • pikA
  • pikB
  • pikC
  • pikF
  • pikG
  • pikH
  • sybA
  • sybB
Dictyostelium discoideum
Class C/3 (Metabotropic glutamate/pheromone receptors)
  • GluPR
  • grlE
  • grlP
  • grlQ
Dictyostelium discoideum
Choline catabolism
  • DDB_G0276821
  • DDB_G0288717
  • chdh
  • ctl2
  • slc44a2
Dictyostelium discoideum
Cholesterol biosynthesis
  • DDB_G0269788
  • DDB_G0271544
  • DDB_G0281069
  • DDB_G0281487
  • Dipi
  • arv1
  • cas1
  • cyp51
  • erg24
  • fdfT
  • fps
  • ggps1
  • hgsB
  • hmgA
  • idi
  • ipi
  • mvd
  • mvk
  • sqle
Dictyostelium discoideum
Cellular hexose transport
  • DDB_G0276801
  • DDB_G0277773
  • DDB_G0281155
  • DDB_G0286151
  • slc50a1
  • symA
Dictyostelium discoideum
Cargo recognition for clathrin-mediated endocytosis
  • DDB_G0268156
  • DDB_G0274261
  • DDB_G0279059
  • DDB_G0279493
  • DDB_G0281155
  • DDB_G0286699
  • DDB_G0292610
  • abcC1
  • abcC13
  • abcC14
  • abcC15
  • abcC2
  • abcC6
  • abcC7
  • abcC9
  • ap1b1
  • ap2a1-1
  • ap2a1-2
  • ap2s1
  • apm1
  • apm2
  • apmA
  • clmA
  • csn1
  • csn2
  • csn3
  • csn4
  • csn5
  • csn6
  • csn7
  • csn8
  • epnA
  • eps15
  • lmpC
  • mrrA
  • nedd8
  • sonA
  • sybA
  • sybB
  • ubqln
Dictyostelium discoideum
Cargo concentration in the ER
  • DDB_G0268452
  • DDB_G0269942
  • DDB_G0271968
  • ctsZ
  • gmsA
  • sarA
  • sec23
  • sec24
  • sec24l
  • syn5
Dictyostelium discoideum
Cam-PDE 1 activation
  • Pde4
  • calA
  • calB
  • camA
  • mlcD
  • pde2
  • pde3
  • regA
Dictyostelium discoideum
Calnexin/calreticulin cycle
  • cnxA
  • crtA
  • pdi2
Dictyostelium discoideum
CS/DS degradation
  • DDB_G0288289
  • hexa1
  • hexa2
  • hexb1
  • hexb2
  • nagA
  • nagE
Dictyostelium discoideum
COPII-mediated vesicle transport
  • DDB_G0268044
  • DDB_G0268452
  • DDB_G0269584
  • DDB_G0269942
  • DDB_G0270566
  • DDB_G0271968
  • DDB_G0274803
  • DDB_G0275331
  • DDB_G0276935
  • DDB_G0281693
  • DDB_G0282433
  • DDB_G0283055
  • DDB_G0286167
  • DDB_G0291694
  • DDB_G0293712
  • cak1-1
  • cak1-2
  • cnrM
  • ctsZ
  • gmsA
  • grpA
  • nsfA
  • ppp6c
  • pppD
  • rab1A
  • rab1B
  • rab1D
  • rab1E
  • rabA
  • rabF1-1
  • rabF1-2
  • rabS
  • rabU
  • rabW
  • rabY
  • rsmM
  • sarA
  • scfd1
  • sec13
  • sec23
  • sec24
  • sec24l
  • sec31
  • snpA
  • snpC
  • syn5
  • syn7
  • syn7A
  • tmem1-1
  • tmem1-2
  • trapcc10-1
  • trapcc10-2
  • trappc1-1
  • trappc1-2
  • trappc2
  • trappc2l
  • trappc3
  • trappc4
  • trappc5
  • wimA
Dictyostelium discoideum
Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
  • alg1
  • alg12
  • alg2
  • alg3
  • alg6
  • alg7
  • alg8
  • alg9
  • mntA
  • mpdu1
Dictyostelium discoideum
Atorvastatin ADME
  • DDB_G0268184
  • abcB2
  • abcB3
  • abcB6
  • abcB7
  • abcC10
  • abcC12
  • abcC3
  • abcC5
  • abcC8
  • tagA
  • tagB
  • tagC
  • tagD
  • ugt2
  • ugt3
Dictyostelium discoideum
Aspirin ADME
  • D2
  • DDB_G0268184
  • DDB_G0276969
  • DDB_G0279717
  • DDB_G0285555
  • DDB_G0291344
  • abcC10
  • abcC12
  • abcC3
  • abcC5
  • abcC8
  • cryS
  • cyp508A1-1
  • cyp508A1-2
  • cyp508A2-1
  • cyp508A2-2
  • cyp508A3-1
  • cyp508A3-2
  • cyp508A4
  • cyp508B1
  • cyp508C1
  • cyp508D1
  • cyp515A1
  • cyp515B1
  • cyp516A1
  • cyp516B1
  • cyp517A1
  • cyp517A2
  • cyp517A4
  • cyp518A1
  • cyp518B1
  • cyp519B1
  • cyp519D1
  • cyp519E1
  • cyp521A1
  • cyp522A1
  • cyp554A1
  • cyp555A1
  • ostA
  • ostB
  • ugt2
  • ugt3
Dictyostelium discoideum
Antimicrobial peptides
  • DDB_G0271242
  • DDB_G0278563
Dictyostelium discoideum
Antigen processing: Ubiquitination & Proteasome degradation
  • DDB_G0268504
  • DDB_G0269704
  • DDB_G0270000
  • DDB_G0271372
  • DDB_G0271726
  • DDB_G0271956
  • DDB_G0272202
  • DDB_G0272218
  • DDB_G0272951
  • DDB_G0273381
  • DDB_G0273419
  • DDB_G0273451
  • DDB_G0273573
  • DDB_G0274897
  • DDB_G0275145
  • DDB_G0277011
  • DDB_G0277047
  • DDB_G0277053
  • DDB_G0277075
  • DDB_G0277249
  • DDB_G0277429
  • DDB_G0278049
  • DDB_G0278075
  • DDB_G0278671
  • DDB_G0278981
  • DDB_G0279003
  • DDB_G0279093
  • DDB_G0279435
  • DDB_G0279463
  • DDB_G0280089
  • DDB_G0280091
  • DDB_G0280347
  • DDB_G0280581
  • DDB_G0280895
  • DDB_G0281369
  • DDB_G0281657
  • DDB_G0281679
  • DDB_G0281833
  • DDB_G0282391
  • DDB_G0282479
  • DDB_G0283667
  • DDB_G0283893
  • DDB_G0283983
  • DDB_G0284145
  • DDB_G0284325
  • DDB_G0285063
  • DDB_G0285261
  • DDB_G0285581
  • DDB_G0285797
  • DDB_G0286289
  • DDB_G0286387
  • DDB_G0286991
  • DDB_G0287221
  • DDB_G0288345
  • DDB_G0288683
  • DDB_G0289043
  • DDB_G0289099
  • DDB_G0290547
  • DDB_G0290641
  • DDB_G0291131
  • DDB_G0291612
  • DDB_G0291902
  • DDB_G0291984
  • DDB_G0292144
  • DDB_G0292302
  • DDB_G0292362
  • DDB_G0292586
  • DDB_G0293756
  • DDB_G0295713
  • M4
  • anapc1
  • anapc10
  • anapc11
  • anapc2
  • anapc3
  • anapc4
  • anapc5
  • anapc6
  • anapc7
  • anapc8
  • apc1
  • apc10
  • apc11
  • apc2
  • apc3
  • apc4
  • apc5
  • apc6
  • apc7
  • apc8
  • apg7
  • atg7
  • cblA-1
  • cblA-2
  • cdc16
  • cdc20
  • cdc23
  • cdc26
  • cdc27
  • cdh1
  • cnrM
  • cul1
  • cul2
  • cul3
  • cul5
  • culA
  • culB
  • culC
  • culE
  • dapA
  • dpr1
  • fp21A
  • fp21B
  • fpa1
  • fpa1A
  • fpa1B
  • fpa2
  • fpaA
  • fpaB-1
  • fpaB-2
  • gacGG
  • hbx1
  • mip1-1
  • mip1-2
  • mtpn
  • nosA
  • prdD
  • prdE
  • prtC
  • prtD
  • psaA
  • psaB
  • psmA1
  • psmA2
  • psmA3
  • psmA4
  • psmA5
  • psmA6
  • psmA7
  • psmB2
  • psmB3
  • psmB4-1
  • psmB4-2
  • psmB5
  • psmB6
  • psmB7
  • psmC1
  • psmC2
  • psmC3
  • psmC4
  • psmC6
  • psmD1
  • psmD10
  • psmD11
  • psmD12
  • psmD13
  • psmD14
  • psmD2
  • psmD3
  • psmD4
  • psmD6
  • psmD7
  • psmD8-1
  • psmD8-2
  • psmD9
  • psmE3
  • psmE4
  • psmF1
  • rbrA
  • rbx1
  • rnf160
  • skp1A
  • skp1B
  • sks1
  • tbp2
  • tbpB
  • tceb1
  • tirA
  • triA
  • uae1
  • uba1
  • uba3
  • uba5
  • ubc2
  • ubcB
  • ubcC
  • ubch10
  • ube1c
  • ube2c
  • ube2j2
  • ube2m
  • ube2n
  • ube2s
  • ube2v
  • ube2w
  • ube3a
  • ubqB
  • ubqC
  • ubqF
  • ubqG
  • ubqH
  • ubqI
  • ubqJ
  • ubqO
  • veg116
  • warA
  • wri
Dictyostelium discoideum
Amino acids regulate mTORC1
  • DDB_G0269680
  • DDB_G0271288
  • DDB_G0272696
  • DDB_G0274141
  • DDB_G0274833
  • DDB_G0277257
  • DDB_G0278475
  • DDB_G0279099
  • DDB_G0279427
  • DDB_G0280947
  • DDB_G0281111
  • DDB_G0283567
  • DDB_G0284957
  • DDB_G0289243
  • DDB_G0291948
  • DDB_G0292056
  • DDB_G0292160
  • atp6v1d
  • atp6v1g
  • dvacB
  • lst8
  • mapbpip
  • mios
  • ragA
  • ragC
  • raptor
  • rheb
  • sec13
  • tor
  • vatA
  • vatB
  • vatC
  • vatD-1
  • vatD-2
  • vatE
  • vatF
  • vatH
  • vatM
  • vatP
  • vatg
  • wdr24
Dictyostelium discoideum
Acyl chain remodelling of PI
  • DDB_G0278541
  • plbD
Dictyostelium discoideum

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

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Supported by JST NBDC Grant Number JPMJND2204

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Last updated: August 19, 2024