GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **2001 - 2025** of **2090** in total

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Pathway Name	Protein Name	UniProt ID ▲	Gene Symbol	Organism
Metabolism of ingested MeSeO2H into MeSeH	Thioredoxin reductase 1, cytoplasmic	Q16881	GRIM12 KDRF TXNRD1	Homo sapiens (human)
Defective ALG11 causes CDG-1p	GDP-Man	Q2TAA5	ALG11 GT8	Homo sapiens (human)
Phosphate bond hydrolysis by NUDT proteins	ADP-sugar pyrophosphatase Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase Nucleotide triphosphate diphosphatase NUDT15 U8 snoRNA-decapping enzyme	Q3LIE5 Q96DE0 Q9NV35 Q9UKK9	ADPRM C17orf48 MTH2 NUDIX5 NUDT15 NUDT16 NUDT5	Homo sapiens (human)
Proton-coupled neutral amino acid transporters	Proton-coupled amino acid transporter 1 Proton-coupled amino acid transporter 2	Q495M3 Q7Z2H8	PAT1 PAT2 SLC36A1 SLC36A2 TRAMD1	Homo sapiens (human)
Organic anion transport	Organic anion transporter 3 Solute carrier family 22 member 11 Solute carrier family 22 member 12 Solute carrier family 22 member 6 Solute carrier family 22 member 7	Q4U2R8 Q8TCC7 Q96S37 Q9NSA0 Q9Y694	NLT OAT1 OAT2 OAT3 OAT4 OATL4 PAHT SLC22A11 SLC22A12 SLC22A6 SLC22A7 SLC22A8 URAT1	Homo sapiens (human)
SDK interactions	Protein sidekick-1 Protein sidekick-2	Q58EX2 Q7Z5N4	KIAA1514 SDK1 SDK2	Homo sapiens (human)
Cilium Assembly	Alpha-tubulin N-acetyltransferase 1 Histone deacetylase 6	Q5SQI0 Q9UBN7	ATAT1 C6orf134 HDAC6 KIAA0901 MEC17	Homo sapiens (human)
MPS IIIC - Sanfilippo syndrome C	Heparan-alpha-glucosaminide N-acetyltransferase	Q68CP4	HGSNAT TMEM76	Homo sapiens (human)
Defective SLC6A19 causes Hartnup disorder (HND)	Sodium-dependent neutral amino acid transporter B(0)AT1	Q695T7	B0AT1 SLC6A19	Homo sapiens (human)
Defective SLC6A19 causes Hartnup disorder (HND)	Sodium-dependent neutral amino acid transporter B(0)AT1	Q695T7	B0AT1 SLC6A19	Homo sapiens (human)
Oleoyl-phe metabolism	N-fatty-acyl-amino acid synthase/hydrolase PM20D1	Q6GTS8	PM20D1	Homo sapiens (human)
rRNA modification in the mitochondrion	5-methylcytosine rRNA methyltransferase NSUN4 Dimethyladenosine transferase 1, mitochondrial Transcription termination factor 4, mitochondrial rRNA methyltransferase 1, mitochondrial rRNA methyltransferase 2, mitochondrial rRNA methyltransferase 3, mitochondrial	Q6IN84 Q7Z6M4 Q8WVM0 Q96CB9 Q9HC36 Q9UI43	FJH1 FTSJ2 MRM1 MRM2 MRM3 MTERF4 MTERFD2 NSUN4 RNMTL1 TFB1M	Homo sapiens (human)
Defective SLC39A4 causes acrodermatitis enteropathica, zinc-deficiency type (AEZ)	Zinc transporter ZIP4	Q6P5W5	SLC39A4 ZIP4	Homo sapiens (human)
Reversal of alkylation damage by DNA dioxygenases	Alpha-ketoglutarate-dependent dioxygenase FTO RNA demethylase ALKBH5	Q6P6C2 Q9C0B1	ABH5 ALKBH5 FTO KIAA1752 OFOXD1	Homo sapiens (human)
Phase 1 - inactivation of fast Na+ channels	Calsenilin Kv channel-interacting protein 1 Kv channel-interacting protein 2 Kv channel-interacting protein 4 Potassium voltage-gated channel subfamily D member 1 Potassium voltage-gated channel subfamily D member 2 Potassium voltage-gated channel subfamily D member 3	Q6PIL6 Q9NS61 Q9NSA2 Q9NZI2 Q9NZV8 Q9UK17 Q9Y2W7	CALP CSEN DREAM KCHIP1 KCHIP2 KCHIP3 KCHIP4 KCND1 KCND2 KCND3 KCNIP1 KCNIP2 KCNIP3 KCNIP4 KIAA1044 VABP	Homo sapiens (human)
Glycerophospholipid catabolism	Glycerophosphocholine cholinephosphodiesterase ENPP6 Glycerophosphodiester phosphodiesterase 1 Glycerophosphodiester phosphodiesterase domain-containing protein 5 Lysophospholipase D GDPD1 Lysophospholipase D GDPD3 Patatin-like phospholipase domain-containing protein 6 Patatin-like phospholipase domain-containing protein 7	Q6UWR7 Q6ZV29 Q7L5L3 Q8IY17 Q8N9F7 Q8WTR4 Q9NZC3	C9orf111 ENPP6 GDE1 GDE2 GDE4 GDE7 GDPD1 GDPD3 GDPD5 MIR16 NTE PNPLA6 PNPLA7	Homo sapiens (human)
FASTK family proteins regulate processing and stability of mitochondrial RNAs	FAST kinase domain-containing protein 2, mitochondrial FAST kinase domain-containing protein 4 FAST kinase domain-containing protein 5, mitochondrial	Q7L8L6 Q969Z0 Q9NYY8	CPR2 FASTKD2 FASTKD4 FASTKD5 KIAA0948 KIAA0971 KIAA1792 TBRG4	Homo sapiens (human)
TWIK-related spinal cord K+ channel (TRESK)	Potassium channel subfamily K member 18	Q7Z418	KCNK18 TRESK TRIK	Homo sapiens (human)
Essential pentosuria	L-xylulose reductase	Q7Z4W1	DCXR SDR20C1	Homo sapiens (human)
Defective DHDDS causes RP59	Dehydrodolichyl diphosphate synthase complex subunit DHDDS Dehydrodolichyl diphosphate synthase complex subunit NUS1	Q86SQ9 Q96E22	C6orf68 DHDDS HDS NGBR NUS1	Homo sapiens (human)
Defective ABCA12 causes ARCI4B	Glucosylceramide transporter ABCA12	Q86UK0	ABC12 ABCA12	Homo sapiens (human)
Regulation of NPAS4 mRNA translation	Helicase MOV-10 Neuronal PAS domain-containing protein 4 Protein argonaute-1 Protein argonaute-2 Protein argonaute-3 Protein argonaute-4 Trinucleotide repeat-containing gene 6A protein Trinucleotide repeat-containing gene 6B protein Trinucleotide repeat-containing gene 6C protein	Q8IUM7 Q8NDV7 Q9H9G7 Q9HCE1 Q9HCJ0 Q9HCK5 Q9UKV8 Q9UL18 Q9UPQ9	AGO1 AGO2 AGO3 AGO4 BHLHE79 CAGH26 EIF2C1 EIF2C2 EIF2C3 EIF2C4 KIAA1093 KIAA1460 KIAA1567 KIAA1582 KIAA1631 MOV10 NPAS4 NXF PASD10 TNRC6 TNRC6A TNRC6B TNRC6C	Homo sapiens (human)
Defective SLC9A9 causes autism 16 (AUTS16)	Sodium/hydrogen exchanger 9	Q8IVB4	NHE9 SLC9A9	Homo sapiens (human)
Defective SFTPA2 causes IPF	Pulmonary surfactant-associated protein A2	Q8IWL1	COLEC5 PSAP SFTP1 SFTPA SFTPA2 SFTPA2B	Homo sapiens (human)
Zinc efflux and compartmentalization by the SLC30 family	Probable proton-coupled zinc antiporter SLC30A3 Proton-coupled zinc antiporter SLC30A1 Proton-coupled zinc antiporter SLC30A2 Proton-coupled zinc antiporter SLC30A5 Proton-coupled zinc antiporter SLC30A8	Q8IWU4 Q8TAD4 Q99726 Q9BRI3 Q9Y6M5	SLC30A1 SLC30A2 SLC30A3 SLC30A5 SLC30A8 ZNT1 ZNT2 ZNT3 ZNT5 ZNT8 ZNTL1 ZTL1	Homo sapiens (human)

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