GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 176 - 200 of 250 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID ▲
Synthesis of PE
  • CKI
  • CKI1
  • CPT1
  • ECT1
  • EKI1
  • EPT1
  • MUQ1
  • PAH1
  • PAP1
  • SMP2
Saccharomyces cerevisiae (brewer's yeast)
CD28 dependent Vav1 pathway
  • CDC42
  • CLA4
  • SKM1
  • SRO2
  • STE20
Saccharomyces cerevisiae (brewer's yeast)
Regulation of TP53 Degradation
  • AVO1
  • AVO3
  • BIT2
  • BIT61
  • DRR2
  • KOM1
  • LST8
  • PKH2
  • SCH9
  • SLI2
  • TOR2
  • TSC11
  • TSC14
  • YPK1
Saccharomyces cerevisiae (brewer's yeast)
Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S
  • CDC33
  • NOP13
  • STM1
  • TIF1
  • TIF2
  • TIF3
  • TIF41A
  • TIF41B
  • TIF42
  • TIF45
  • TIF4631
Saccharomyces cerevisiae (brewer's yeast)
TP53 Regulates Metabolic Genes
  • AHP1
  • GLR1
  • MET19
  • PGI1
  • TPX1
  • TRX1
  • TRX2
  • TRX3
  • TSA
  • TSA1
  • TSA2
  • ZRG14
  • ZWF1
Saccharomyces cerevisiae (brewer's yeast)
Synthesis of bile acids and bile salts
  • BSR3
  • ERG25
  • FET6
  • HES1
  • KES1
  • OSH1
  • OSH2
  • OSH3
  • OSH4
  • OSH5
  • SWH1
Saccharomyces cerevisiae (brewer's yeast)
Atorvastatin ADME
  • BAT1
  • BPT1
  • NFT1
  • VMR1
  • YBT1
  • YCF1
  • YOR1
  • YRS1
Saccharomyces cerevisiae (brewer's yeast)
SUMOylation of RNA binding proteins
  • ANU3
  • ASM4
  • CST20
  • GLE2
  • HMD1
  • HTN1
  • MLP1
  • NAB3
  • NDC1
  • NIC96
  • NLE3
  • NOP5
  • NOP58
  • NSP1
  • NSP116
  • NUP1
  • NUP116
  • NUP120
  • NUP133
  • NUP170
  • NUP188
  • NUP192
  • NUP2
  • NUP42
  • NUP57
  • NUP59
  • NUP82
  • NUP84
  • NUP85
  • RAE1
  • RAT2
  • RAT3
  • RAT9
  • RIP1
  • SEC13
  • SEH1
  • SFO1
  • SMT3
  • UBC9
  • UIP1
  • YRB1
  • YRB2
Saccharomyces cerevisiae (brewer's yeast)
Polymerase switching
  • CDC17
  • CDC44
  • POL1
  • POL12
  • POL30
  • PRI1
  • PRI2
  • RFC1
  • RFC2
  • RFC3
  • RFC4
  • RFC5
Saccharomyces cerevisiae (brewer's yeast)
RHOF GTPase cycle
  • BEM2
  • BEM3
  • DBM1
  • ECM25
  • IPL2
  • RGA1
  • RGA2
  • RGD1
  • RHO1
  • RHO2
  • RHO3
  • RHO4
  • SUP9
  • THE1
  • YHR182W
Saccharomyces cerevisiae (brewer's yeast)
Synthesis of dolichyl-phosphate-glucose
  • ALG5
Saccharomyces cerevisiae (brewer's yeast)
ADP signalling through P2Y purinoceptor 1
  • CDC70
  • DAC1
  • GPA1
  • HOG1
  • PLB1
  • PLB2
  • PLB3
  • SCG1
  • SPO1
  • SSK3
Saccharomyces cerevisiae (brewer's yeast)
Antigen processing: Ubiquitination & Proteasome degradation
  • APC1
  • APC10
  • APC11
  • APC2
  • APC3
  • APC4
  • APC5
  • APE2
  • APG7
  • ATG7
  • BLH1
  • BLM10
  • BLM3
  • CBF3D
  • CDC16
  • CDC20
  • CDC23
  • CDC27
  • CDC34
  • CDC53
  • CDH1
  • CIM3
  • CIM5
  • CRL13
  • CRL3
  • CVT2
  • DNA6
  • DOA2
  • DOA3
  • DOA5
  • DOC1
  • ELC1
  • GAL6
  • GID3
  • HCT1
  • HEL1
  • HOS4
  • HRD2
  • HRT1
  • HRT3
  • HUL4
  • HUL5
  • ITT1
  • LAP1
  • LAP3
  • LIS1
  • LSB2
  • LTN1
  • MDP1
  • MMS2
  • MPE1
  • MPR1
  • NAS1
  • NAS2
  • NAS4
  • NAS5
  • NAS7
  • NIN1
  • NPI1
  • PAC1
  • PCS1
  • PHO81
  • PIN3
  • PRC1
  • PRC2
  • PRD1
  • PRE1
  • PRE10
  • PRE2
  • PRE3
  • PRE4
  • PRE5
  • PRE6
  • PRE8
  • PRE9
  • PRG1
  • PRS1
  • PRS2
  • PRS4
  • PRS5
  • PTR1
  • PUP1
  • PUP2
  • PUP3
  • QRI8
  • RAD6
  • RBX1
  • RKR1
  • RMC1
  • ROC1
  • RPD1
  • RPN1
  • RPN11
  • RPN12
  • RPN2
  • RPN3
  • RPN5
  • RPN6
  • RPN7
  • RPN8
  • RPN9
  • RPT1
  • RPT2
  • RPT3
  • RPT4
  • RPT5
  • RPT6
  • RSI1
  • RSP5
  • SCD2
  • SCL1
  • SEN3
  • SKP1
  • SNB1
  • SSR2
  • SUG1
  • SUG2
  • SUN2
  • TBPY
  • TBY1
  • TOM1
  • UBA1
  • UBA3
  • UBC1
  • UBC11
  • UBC12
  • UBC13
  • UBC2
  • UBC3
  • UBC4
  • UBC5
  • UBC6
  • UBC7
  • UBC8
  • UBI4
  • UBR1
  • UBR2
  • UFD2
  • UFD4
  • UFO1
  • YCP1
  • YDR306C
  • YHS4
  • YJR141W
  • YLR352W
  • YNT1
  • YTA1
  • YTA2
  • YTA3
  • YTA5
Saccharomyces cerevisiae (brewer's yeast)
Iron uptake and transport
  • ADP1
  • CBF3D
  • CDC53
  • RUB1
  • SKP1
  • YDR306C
  • YJL163C
  • YLR352W
Saccharomyces cerevisiae (brewer's yeast)
Transport of organic anions
  • ESBP6
  • MCH2
  • MCH3
  • MCH4
  • MCH5
Saccharomyces cerevisiae (brewer's yeast)
MAP2K and MAPK activation
  • DAC2
  • FUS3
  • HOG4
  • KSS1
  • MKK1
  • MKK2
  • MPK1
  • PBS2
  • SFS4
  • SLT2
  • SMK1
  • SSK4
  • SSP32
  • SSP33
  • STE7
Saccharomyces cerevisiae (brewer's yeast)
RNA Polymerase I Transcription Initiation
  • RPA1
  • RPA12
  • RPA135
  • RPA190
  • RPA2
  • RPA43
  • RPA49
  • RPA7
  • RPB10
  • RPB12
  • RPB5
  • RPB6
  • RPB8
  • RPC10
  • RPC40
  • RPC5
  • RPC9
  • RPO26
  • RRN1
  • RRN12
  • RRN13
  • RRN2
  • RRN3
  • RRN4
  • SRP3
Saccharomyces cerevisiae (brewer's yeast)
G alpha (i) signalling events
  • GPA2
  • RGS2
  • SSP101
  • SST2
Saccharomyces cerevisiae (brewer's yeast)
IRE1alpha activates chaperones
  • ERN1
  • IRE1
Saccharomyces cerevisiae (brewer's yeast)
Detoxification of Reactive Oxygen Species
  • AHP1
  • AIM14
  • CCS1
  • CTA1
  • CYC1
  • CYC7
  • CYP3
  • FRE8
  • GLR1
  • LYS7
  • SOD1
  • SOD2
  • TPX1
  • TRX1
  • TRX2
  • TRX3
  • TSA
  • TSA1
  • TSA2
  • ZRG14
Saccharomyces cerevisiae (brewer's yeast)
The NLRP3 inflammasome
  • ALY1
  • ALY2
  • ART3
  • ART5
  • ART6
  • CSR2
  • ECM21
  • HSP82
  • HSP90
  • LDB19
  • MRG19
  • PAL3
  • RIM8
  • ROD1
  • ROG3
  • SGT1
  • TRX1
  • TRX2
  • TRX3
Saccharomyces cerevisiae (brewer's yeast)
Multifunctional anion exchangers
  • SEL2
  • SFP2
  • SUL1
  • SUL2
Saccharomyces cerevisiae (brewer's yeast)
Neutrophil degranulation
  • ABF2
  • ACT2
  • ACT3
  • ACT5
  • AIM14
  • AIM7
  • AMD
  • AMD1
  • APG7
  • APL3
  • APM1
  • APT1
  • ARC15
  • ARP1
  • ARP2
  • ARX1
  • ATG7
  • BEM3
  • BET5
  • BIN3
  • BUD1
  • BUD16
  • BUR1
  • CAP1
  • CAR1
  • CBR
  • CBR1
  • CBR5
  • CCT2
  • CCT8
  • CDC19
  • CDC48
  • CDC50
  • CDD1
  • CIM5
  • CKB2
  • CLS7
  • CSC1
  • CTA1
  • CTK1
  • CTS2
  • CUE5
  • CUP5
  • CVT2
  • CYK1
  • DAC2
  • DAP1
  • DCK1
  • DED1
  • DHC1
  • DNF1
  • DNF3
  • DOA5
  • DRS2
  • DSN1
  • DYN1
  • DYN2
  • EFT1
  • EFT2
  • EMI2
  • EPS1
  • ERF4
  • ERV29
  • FAT1
  • FOX3
  • FRE8
  • FUS3
  • GA-5
  • GAL5
  • GDB1
  • GDI1
  • GEF2
  • GID5
  • GLG1
  • GLG2
  • GLK1
  • GPH1
  • HBS1
  • HDF1
  • HDF2
  • HEM2
  • HEX1
  • HFD1
  • HIM1
  • HKA
  • HKB
  • HMO1
  • HMO2
  • HOG1
  • HOR3
  • HPO2
  • HRD2
  • HSC82
  • HSM2
  • HSP82
  • HSP90
  • HSS7
  • HXK1
  • HXK2
  • HYM1
  • IDP1
  • IDS2
  • IMD2
  • IMD3
  • IMD4
  • IQG1
  • IST1
  • IST2
  • IXR1
  • JEM1
  • KAP95
  • KAR8
  • KSS1
  • LAP2
  • LSB2
  • MDS3
  • MPK1
  • MPR1
  • NAS1
  • NAS4
  • NAS5
  • NAS7
  • NDK1
  • NES24
  • NGK1
  • NHP10
  • NHP6A
  • NHPA
  • NIT3
  • NPC2
  • NPP1
  • NPP2
  • NPT1
  • OMS1
  • ORD1
  • ORM1
  • ORM2
  • OST3
  • OST6
  • PFK1
  • PFK2
  • PGI1
  • PGM1
  • PGM2
  • PGM3
  • PHM7
  • PIN3
  • PKC1
  • PLD1
  • PMD1
  • PNP1
  • POT1
  • POX3
  • PRE8
  • PRM15
  • PRS4
  • PRX1
  • PTP1
  • PTP2
  • PTP3
  • PTR2
  • PUP1
  • PUP2
  • PUR5
  • PYK1
  • PYK2
  • RHO1
  • RHO2
  • RHO3
  • RHO4
  • RNY1
  • RPD1
  • RPN1
  • RPN11
  • RPN2
  • RPN3
  • RPN5
  • RPN6
  • RPN7
  • RPN8
  • RPN9
  • RPT1
  • RPT5
  • RSN1
  • RSR1
  • SAC7
  • SCP1
  • SCS2
  • SEC19
  • SEC26
  • SEC4
  • SEC9
  • SEL1
  • SEN3
  • SGV1
  • SHR5
  • SLC1
  • SLT2
  • SMK1
  • SPO14
  • SPO20
  • SPO75
  • SPP81
  • SRO6
  • SRP14
  • SRV2
  • SSA1
  • SSA2
  • SSA3
  • SSA4
  • SSB1
  • SSB2
  • SSK3
  • SSR2
  • STT1
  • STV1
  • SUN2
  • SWA3
  • SWA4
  • TCP2
  • TEF1
  • TEF2
  • TOM1
  • TPX1
  • TSA
  • TSA1
  • TSA2
  • UBX2
  • VAM4
  • VID28
  • VMA3
  • VMA8
  • VPH1
  • VPS12
  • VPS21
  • VPS73
  • VPT12
  • WBP1
  • YAP54
  • YBR241C
  • YBR284W
  • YFR018C
  • YG101
  • YG103
  • YJL070C
  • YKU70
  • YKU80
  • YNK
  • YNK1
  • YPT10
  • YPT21
  • YPT51
  • YPT52
  • YPT53
  • YPT6
  • YPT7
  • YTA1
  • YTA3
  • ZRG14
Saccharomyces cerevisiae (brewer's yeast)
Regulation of PTEN stability and activity
  • BLM10
  • BLM3
  • CIM3
  • CIM5
  • CKA1
  • CKA2
  • CKB2
  • CRL13
  • CRL3
  • DOA3
  • DOA5
  • HRD2
  • MDP1
  • MPR1
  • NAS1
  • NAS2
  • NAS4
  • NAS5
  • NAS7
  • NIN1
  • NPI1
  • PCS1
  • PRC1
  • PRC2
  • PRE1
  • PRE10
  • PRE2
  • PRE3
  • PRE4
  • PRE5
  • PRE6
  • PRE8
  • PRE9
  • PRG1
  • PRS1
  • PRS2
  • PRS4
  • PRS5
  • PUP1
  • PUP2
  • PUP3
  • RPD1
  • RPN1
  • RPN11
  • RPN12
  • RPN2
  • RPN3
  • RPN5
  • RPN6
  • RPN7
  • RPN8
  • RPN9
  • RPT1
  • RPT2
  • RPT3
  • RPT4
  • RPT5
  • RPT6
  • RSP5
  • SCD2
  • SCL1
  • SEN3
  • SUG1
  • SUG2
  • SUN2
  • TBPY
  • TBY1
  • TEP1
  • UBI4
  • YHS4
  • YNT1
  • YTA1
  • YTA2
  • YTA3
  • YTA5
Saccharomyces cerevisiae (brewer's yeast)
Branched-chain amino acid catabolism
  • BAT1
  • BAT2
  • ECA39
  • EHD3
  • MRP5
  • TWT1
  • TWT2
Saccharomyces cerevisiae (brewer's yeast)

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Supported by JST NBDC Grant Number JPMJND2204

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Last updated: August 19, 2024