GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **201 - 225** of **250** in total

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Pathway Name	Protein Name	UniProt ID	Gene Symbol	Organism
Assembly of the pre-replicative complex	DNA replication licensing factor MCM2 DNA replication licensing factor MCM3 DNA replication licensing factor MCM4 DNA replication licensing factor MCM6 DNA replication licensing factor MCM7 Minichromosome maintenance protein 5	P24279 P29469 P29496 P30665 P38132 P53091	CDC46 CDC47 CDC54 HCD21 MCM2 MCM3 MCM4 MCM5 MCM6 MCM7	Saccharomyces cerevisiae (brewer's yeast)
RHO GTPases Activate NADPH Oxidases	Bud emergence protein 1 Peptidyl-prolyl cis-trans isomerase ESS1 Phosphatidylinositol 3-kinase VPS34 Protein kinase C-like 1 Serine/threonine-protein kinase VPS15	P22219 P22543 P22696 P24583 P29366	BEM1 END12 ESS1 GRD8 HPO2 PEP15 PIN1 PKC1 PTF1 SRO1 STT1 VAC4 VPL19 VPL7 VPS15 VPS34 VPT29	Saccharomyces cerevisiae (brewer's yeast)
Clathrin-mediated endocytosis	AP-1 complex subunit beta-1 AP-2 complex subunit alpha AP-2 complex subunit beta AP-2 complex subunit mu AP-2 complex subunit sigma Actin cytoskeleton-regulatory complex protein END3 Actin cytoskeleton-regulatory complex protein PAN1 Clathrin heavy chain Clathrin light chain Cytokinesis protein 2 EH domain-containing and endocytosis protein 1 Increased rDNA silencing protein 4 Phosphatidylinositol 4-phosphate 5-kinase MSS4 Rho-GTPase-activating protein RGD2 Suppressor of yeast profilin deletion	P17891 P22137 P25623 P27351 P32521 P34216 P36000 P36115 P38065 P38994 P39013 P43556 Q00381 Q05080 Q99186	AMP1 APL1 APL2 APL3 APM4 APS2 BUD15 CHC1 CLC1 CYK2 DIM2 EDE1 END3 HOF1 IRS4 MDP3 MIP3 MSS4 PAN1 RGD2 SYP1 YAP17 YAP80	Saccharomyces cerevisiae (brewer's yeast)
RNA Polymerase II Promoter Escape	Cyclin CCL1 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB/SSL2 General transcription and DNA repair factor IIH subunit SSL1 General transcription and DNA repair factor IIH subunit TFB1 General transcription and DNA repair factor IIH subunit TFB2 General transcription and DNA repair factor IIH subunit TFB4 General transcription and DNA repair factor IIH subunit TFB5 Protein SPT3 RNA polymerase II transcription factor B subunit 3 Serine/threonine-protein kinase KIN28 TATA-box-binding protein Transcription initiation factor IIA large subunit Transcription initiation factor IIA subunit 2 Transcription initiation factor IIB Transcription initiation factor IIE subunit alpha Transcription initiation factor IIE subunit beta Transcription initiation factor IIF subunit alpha Transcription initiation factor IIF subunit beta Transcription initiation factor TFIID subunit 10 Transcription initiation factor TFIID subunit 11 Transcription initiation factor TFIID subunit 12 Transcription initiation factor TFIID subunit 13 Transcription initiation factor TFIID subunit 1 Transcription initiation factor TFIID subunit 2 Transcription initiation factor TFIID subunit 4 Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 6 Transcription initiation factor TFIID subunit 7 Transcription initiation factor TFIID subunit 9	P04050 P06242 P06839 P06844 P08518 P11747 P13393 P16370 P20433 P20434 P20435 P20436 P22139 P23255 P27999 P29055 P32773 P32774 P32776 P34087 P36100 P36145 P37366 P38129 P38902 P40422 P41895 P41896 P46677 P50105 P53040 Q00578 Q02939 Q03290 Q03761 Q04226 Q04673 Q05021 Q05027 Q12004 Q12030 Q3E7C1	BTF1 CCL1 FUN81 KIN28 LOM3 MPT1 RAD25 RAD3 REM1 RIG2 RPA7 RPB1 RPB10 RPB11 RPB12 RPB150 RPB2 RPB220 RPB3 RPB4 RPB5 RPB6 RPB7 RPB8 RPB9 RPC10 RPC9 RPO21 RPO22 RPO26 SPT15 SPT3 SSL1 SSL2 SSU71 SUA7 SUA8 TAF1 TAF10 TAF11 TAF12 TAF13 TAF130 TAF145 TAF150 TAF17 TAF19 TAF2 TAF23 TAF25 TAF4 TAF40 TAF48 TAF5 TAF6 TAF60 TAF61 TAF67 TAF68 TAF7 TAF9 TAF90 TBP1 TFA1 TFA2 TFB1 TFB2 TFB3 TFB4 TFB5 TFG1 TFG2 TOA1 TOA2 TSG2 TSM1 UVS112	Saccharomyces cerevisiae (brewer's yeast)
Estrogen-dependent gene expression	ATP-dependent RNA helicase DBP2 CTD kinase subunit alpha CTD kinase subunit beta DNA damage-responsive transcriptional repressor RPH1 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 Fork head protein homolog 1 Forkhead transcription factor HCM1 Histone H2A.1 Histone H2A.2 Histone H2A.Z Histone H2B.1 Histone H2B.2 Histone H3-like centromeric protein CSE4 Histone H3 Histone H4 Histone acetyltransferase ESA1 Histone acetyltransferase GCN5 Histone deacetylase RPD3 Nitrogen regulatory protein DAL80 Nitrogen regulatory protein GLN3 Polyamine oxidase FMS1 Protein BUR2 Protein GZF3 Protein arginine N-methyltransferase 1 TATA-box-binding protein Transcription initiation factor IIA large subunit Transcription initiation factor IIA subunit 2 Transcription initiation factor IIF subunit alpha Transcription initiation factor IIF subunit beta Transcriptional activator/repressor GIS1 Transcriptional regulator NRG1 Transcriptional regulatory protein GAT1	P02293 P02294 P02309 P04050 P04911 P04912 P08518 P13393 P16370 P18494 P20433 P20434 P20435 P20436 P22139 P24783 P25364 P26343 P27999 P32561 P32773 P32774 P34087 P36012 P38074 P38902 P39956 P40422 P40466 P41895 P41896 P42944 P43574 P46962 P50264 P61830 Q03125 Q03330 Q03833 Q03957 Q05949 Q08649 Q12692	ADA4 BTF1 BUR2 CSE4 CSL2 CST4 CTK1 CTK2 DAL80 DBP2 ESA1 FKH1 FMS1 GAT1 GCN5 GIS1 GLN3 GZF3 H2A1 H2A2 H2AZ H2B1 H2B2 HCM1 HHF1 HHF2 HHT1 HHT2 HMT1 HTA1 HTA2 HTA3 HTB1 HTB2 HTZ1 MOF6 MSS1 NRG1 ODP1 REC3 RMT1 RPA7 RPB1 RPB10 RPB11 RPB12 RPB150 RPB2 RPB220 RPB3 RPB4 RPB5 RPB6 RPB7 RPB8 RPB9 RPC10 RPC9 RPD3 RPH1 RPO21 RPO22 RPO26 SDI2 SDS6 SIN2 SPT11 SPT12 SPT15 SSU71 SUA8 SWI9 TBP1 TFG1 TFG2 TOA1 TOA2 UGA43	Saccharomyces cerevisiae (brewer's yeast)
Acyl chain remodelling of PS	Lysophospholipase 1 Lysophospholipase 2 Lysophospholipase 3 Lysophospholipid acyltransferase Oxysterol-binding protein homolog 4 Oxysterol-binding protein homolog 5 Oxysterol-binding protein homolog 6 Oxysterol-binding protein homolog 7 Putative meiotic phospholipase SPO1	P35843 P35844 P38755 P39105 P53541 Q02201 Q03674 Q08108 Q08548	ALE1 BSR3 HES1 KES1 LCA1 LPT1 OSH4 OSH5 OSH6 OSH7 PLB1 PLB2 PLB3 SLC4 SPO1	Saccharomyces cerevisiae (brewer's yeast)
Transport and synthesis of PAPS	Adenylyl-sulfate kinase Sulfate permease 1 Sulfate permease 2	P38359 Q02196 Q12325	MET14 SEL2 SFP2 SUL1 SUL2	Saccharomyces cerevisiae (brewer's yeast)
Termination of translesion DNA synthesis	DNA polymerase epsilon catalytic subunit A DNA polymerase epsilon subunit B DNA polymerase epsilon subunit C DNA polymerase epsilon subunit D DNA polymerase eta DNA repair protein REV1 Polyubiquitin Proliferating cell nuclear antigen Protein DLS1 Replication factor A protein 1 Replication factor A protein 2 Replication factor C subunit 1 Replication factor C subunit 2 Replication factor C subunit 3 Replication factor C subunit 4 Replication factor C subunit 5 Ubiquitin carboxyl-terminal hydrolase 3	P0CG63 P12689 P15873 P21951 P22336 P24482 P26754 P27344 P38251 P38629 P38630 P40339 P40348 P40366 Q01477 Q04049 Q04603	BUF1 BUF2 CDC44 DBH1 DLS1 DPB2 DPB3 DPB4 DUN2 POL2 POL30 RAD30 REV1 RFA1 RFA2 RFC1 RFC2 RFC3 RFC4 RFC5 RPA1 SCD2 UBI4 UBP3	Saccharomyces cerevisiae (brewer's yeast)
Synthesis of PIPs at the early endosome membrane	Phosphatidylinositol 3-kinase VPS34 Phosphatidylinositol 4-kinase LSB6 Phosphoinositide 3-phosphatase Serine/threonine-protein kinase VPS15	P22219 P22543 P42951 P47147	END12 GRD8 LSB6 PEP15 VAC4 VPL19 VPL7 VPS15 VPS34 VPT29 YMR1	Saccharomyces cerevisiae (brewer's yeast)
ABC transporters in lipid homeostasis	Peroxisomal biogenesis factor 3 Peroxisomal long-chain fatty acid import protein 1 Peroxisomal long-chain fatty acid import protein 2 Peroxisomal membrane protein import receptor PEX19 Probable ATP-dependent permease Uncharacterized ABC transporter ATP-binding protein/permease YOL075C	P25371 P28795 P34230 P41909 Q07418 Q08234	ADP1 PAL1 PAS12 PAS3 PAT1 PAT2 PEX19 PEX3 PXA1 PXA2 SSH2 YOL075C	Saccharomyces cerevisiae (brewer's yeast)
Thyroxine biosynthesis	Probable ferric reductase transmembrane component 8 Probable metalloreductase AIM14	P53109 Q12209	AIM14 FRE8	Saccharomyces cerevisiae (brewer's yeast)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)	ATP-dependent RNA helicase FAL1 ATP-dependent helicase NAM7 EST/SMG-like protein 1 EST/SMG-like protein 2 Eukaryotic initiation factor 4F subunit p150 Eukaryotic peptide chain release factor GTP-binding subunit Eukaryotic peptide chain release factor subunit 1 Large ribosomal subunit protein P1A Large ribosomal subunit protein P2A Large ribosomal subunit protein eL13B Large ribosomal subunit protein eL14B Large ribosomal subunit protein eL15A Large ribosomal subunit protein eL15B Large ribosomal subunit protein eL18A Large ribosomal subunit protein eL18B Large ribosomal subunit protein eL19 Large ribosomal subunit protein eL19A Large ribosomal subunit protein eL20A Large ribosomal subunit protein eL20B Large ribosomal subunit protein eL21A Large ribosomal subunit protein eL24A Large ribosomal subunit protein eL27A Large ribosomal subunit protein eL29 Large ribosomal subunit protein eL30 Large ribosomal subunit protein eL31A Large ribosomal subunit protein eL31B Large ribosomal subunit protein eL32 Large ribosomal subunit protein eL33A Large ribosomal subunit protein eL36A Large ribosomal subunit protein eL36B Large ribosomal subunit protein eL37A Large ribosomal subunit protein eL37B Large ribosomal subunit protein eL38 Large ribosomal subunit protein eL39 Large ribosomal subunit protein eL42A Large ribosomal subunit protein eL42B Large ribosomal subunit protein eL6A Large ribosomal subunit protein eL6B Large ribosomal subunit protein eL8B Large ribosomal subunit protein uL10 Large ribosomal subunit protein uL11A Large ribosomal subunit protein uL11B Large ribosomal subunit protein uL13A Large ribosomal subunit protein uL14A Large ribosomal subunit protein uL14B Large ribosomal subunit protein uL15 Large ribosomal subunit protein uL16 Large ribosomal subunit protein uL18 Large ribosomal subunit protein uL1A Large ribosomal subunit protein uL1B Large ribosomal subunit protein uL22A Large ribosomal subunit protein uL22B Large ribosomal subunit protein uL23 Large ribosomal subunit protein uL24A Large ribosomal subunit protein uL24B Large ribosomal subunit protein uL29A Large ribosomal subunit protein uL29B Large ribosomal subunit protein uL2A Large ribosomal subunit protein uL2B Large ribosomal subunit protein uL30A Large ribosomal subunit protein uL3 Large ribosomal subunit protein uL4A Large ribosomal subunit protein uL4B Large ribosomal subunit protein uL5A Large ribosomal subunit protein uL5B Large ribosomal subunit protein uL6B Nonsense-mediated mRNA decay factor EBS1 Nonsense-mediated mRNA decay protein 2 Nonsense-mediated mRNA decay protein 3 Nuclear cap-binding protein complex subunit 1 Nuclear cap-binding protein subunit 2 Polyubiquitin Protein PES4 Protein phosphatase PP2A regulatory subunit A Protein phosphatase PP2A regulatory subunit B Serine/threonine-protein phosphatase PP2A-1 catalytic subunit Small ribosomal subunit protein eS10A Small ribosomal subunit protein eS10B Small ribosomal subunit protein eS12 Small ribosomal subunit protein eS17A Small ribosomal subunit protein eS17B Small ribosomal subunit protein eS19A Small ribosomal subunit protein eS1B Small ribosomal subunit protein eS21B Small ribosomal subunit protein eS24A Small ribosomal subunit protein eS24B Small ribosomal subunit protein eS25A Small ribosomal subunit protein eS26A Small ribosomal subunit protein eS27A Small ribosomal subunit protein eS27B Small ribosomal subunit protein eS28B Small ribosomal subunit protein eS4A Small ribosomal subunit protein eS4B Small ribosomal subunit protein eS6A Small ribosomal subunit protein eS6B Small ribosomal subunit protein eS7A Small ribosomal subunit protein eS8A Small ribosomal subunit protein eS8B Small ribosomal subunit protein uS10 Small ribosomal subunit protein uS11B Small ribosomal subunit protein uS12A Small ribosomal subunit protein uS12B Small ribosomal subunit protein uS13A Small ribosomal subunit protein uS13B Small ribosomal subunit protein uS14A Small ribosomal subunit protein uS15 Small ribosomal subunit protein uS17A Small ribosomal subunit protein uS17B Small ribosomal subunit protein uS19 Small ribosomal subunit protein uS2A Small ribosomal subunit protein uS3 Small ribosomal subunit protein uS4A Small ribosomal subunit protein uS4B Small ribosomal subunit protein uS5 Small ribosomal subunit protein uS7 Small ribosomal subunit protein uS8A Small ribosomal subunit protein uS9A Small ribosomal subunit protein uS9B Telomere elongation protein EST1 Ubiquitin-ribosomal protein eS31 fusion protein	O13516 O14455 P02406 P02407 P04449 P04456 P04650 P05317 P05318 P05319 P05453 P05737 P05739 P05740 P05743 P05744 P05745 P05747 P05748 P05750 P05755 P05756 P05759 P07280 P0C0W1 P0C0W9 P0C0X0 P0C2H6 P0C2H8 P0C2H9 P0CG63 P0CX23 P0CX24 P0CX27 P0CX28 P0CX29 P0CX30 P0CX31 P0CX32 P0CX35 P0CX36 P0CX37 P0CX38 P0CX39 P0CX40 P0CX41 P0CX42 P0CX43 P0CX44 P0CX45 P0CX46 P0CX47 P0CX48 P0CX49 P0CX50 P0CX51 P0CX52 P0CX53 P0CX54 P0CX55 P0CX56 P0CX82 P0CX83 P0CX84 P0CX85 P10664 P12385 P14120 P14126 P14127 P17214 P23248 P23594 P25443 P26321 P26783 P26784 P26786 P29453 P30771 P31383 P32905 P34160 P35997 P36168 P38061 P38701 P38711 P38754 P38798 P39516 P39684 P39935 P39938 P40212 P40456 P41057 P41805 P46784 P46990 P48412 P48589 P49166 P49167 P49626 P51401 P51402 P53221 P54780 Q00362 Q01855 Q02326 Q02753 Q03466 Q08745 Q08920 Q12099 Q3E754 Q3E757 Q3E792	CBC1 CBC2 CBP20 CBP80 CDC55 CRY2 CYH2 EBS1 ESL1 ESL2 EST1 FAL1 GCR3 GRC5 GST1 IFS1 IFS2 KRB1 L10E L12EIB L12EIIA MAK18 MAK8 MOF4 MUD13 NAB1 NAB1A NAM7 NMD2 PES4 PLC2 PNM2 PPH21 QSR1 RP28A RP28B RP29 RP39A RP39B RP51A RP51B RP55A RP61R RPA0 RPA1 RPA2 RPL1 RPL10 RPL10A RPL10B RPL10E RPL11A RPL11B RPL12A RPL12B RPL13 RPL13A RPL13B RPL14B RPL15A RPL15B RPL16A RPL16B RPL17 RPL17A RPL17AA RPL17AB RPL17B RPL18A RPL18A1 RPL18A2 RPL18B RPL19A RPL19B RPL1A RPL1B RPL2 RPL20A RPL20B RPL21A RPL23A RPL23B RPL24A RPL25 RPL26 RPL26A RPL26B RPL27 RPL27A RPL28 RPL29 RPL2A RPL2B RPL3 RPL30 RPL30A RPL31A RPL31B RPL32 RPL33A RPL33B RPL34 RPL34A RPL34B RPL35A RPL35B RPL36A RPL36B RPL37A RPL37B RPL38 RPL39 RPL39A RPL39B RPL41A RPL41B RPL42A RPL42B RPL44 RPL46 RPL4A RPL4B RPL5 RPL5A RPL5B RPL6A RPL6B RPL7A RPL8A RPL8B RPL9B RPLA0 RPLA1 RPLA2 RPP0 RPP1A RPP2A RPS0A RPS101 RPS102 RPS10A RPS10B RPS11A RPS11B RPS12 RPS13 RPS13A RPS13B RPS13C RPS14A RPS14B RPS15 RPS16A RPS16AA RPS16B RPS17A RPS17B RPS18A RPS18B RPS19A RPS1B RPS2 RPS20 RPS21 RPS21B RPS22A RPS23A RPS23B RPS24 RPS24A RPS24B RPS24EA RPS24EB RPS25A RPS25B RPS26 RPS26A RPS26B RPS27A RPS27B RPS28A RPS28B RPS29A RPS3 RPS30 RPS31 RPS31A RPS33B RPS36A RPS37 RPS4 RPS4A RPS4B RPS5 RPS6A RPS6B RPS7A RPS7B RPS8A RPS8B RPS9A RPS9B SAE1 SAL3 SAL4 SCD2 SCL41A SCL41B SOS1 SOS2 SPB2 SSM1 SSM1A SSM1B SSM2 STO1 SUA1 SUA6 SUF12 SUF14 SUP1 SUP2 SUP35 SUP38 SUP44 SUP45 SUP46 SUT1 TCM1 TIF4631 TPD3 UBI3 UBI4 UPF1 UPF2 UPF3 URP1 URP2 YL10A YL10B YL14A YL14B YL16A YL16B YL43 YL8A YS11A YS29A YST1	Saccharomyces cerevisiae (brewer's yeast)
mRNA Capping	Cyclin CCL1 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB/SSL2 General transcription and DNA repair factor IIH subunit SSL1 General transcription and DNA repair factor IIH subunit TFB1 General transcription and DNA repair factor IIH subunit TFB2 General transcription and DNA repair factor IIH subunit TFB4 General transcription and DNA repair factor IIH subunit TFB5 Nuclear cap-binding protein complex subunit 1 Nuclear cap-binding protein subunit 2 RNA polymerase II transcription factor B subunit 3 Serine/threonine-protein kinase KIN28 Transcription elongation factor SPT5 Transcription initiation factor IIF subunit alpha Transcription initiation factor IIF subunit beta mRNA cap guanine-N7 methyltransferase mRNA-capping enzyme subunit alpha	P04050 P06242 P06839 P08518 P16370 P20433 P20434 P20435 P20436 P22139 P27692 P27999 P32776 P32783 P34087 P34160 P37366 P38902 P40422 P41895 P41896 Q00578 Q01159 Q02939 Q03290 Q04673 Q08920 Q12004 Q3E7C1	ABD1 CBC1 CBC2 CBP20 CBP80 CCL1 CEG1 GCR3 KIN28 LOM3 MUD13 RAD25 RAD3 REM1 RIG2 RPA7 RPB1 RPB10 RPB11 RPB12 RPB150 RPB2 RPB220 RPB3 RPB4 RPB5 RPB6 RPB7 RPB8 RPB9 RPC10 RPC9 RPO21 RPO22 RPO26 SAE1 SPT5 SSL1 SSL2 SSU71 STO1 SUA8 SUT1 TFB1 TFB2 TFB3 TFB4 TFB5 TFG1 TFG2 UVS112	Saccharomyces cerevisiae (brewer's yeast)
SUMOylation of chromatin organization proteins	E3 SUMO-protein ligase SIZ1 Histone H4 Histone deacetylase HDA1 Histone deacetylase RPD3 Nucleoporin ASM4 Nucleoporin NDC1 Nucleoporin NIC96 Nucleoporin NSP1 Nucleoporin NUP116/NSP116 Nucleoporin NUP120 Nucleoporin NUP133 Nucleoporin NUP170 Nucleoporin NUP188 Nucleoporin NUP192 Nucleoporin NUP1 Nucleoporin NUP2 Nucleoporin NUP42 Nucleoporin NUP57 Nucleoporin NUP82 Nucleoporin NUP84 Nucleoporin NUP85 Nucleoporin SEH1 Protein MLP1 Protein transport protein SEC13 Ran-specific GTPase-activating protein 1 Ran-specific GTPase-activating protein 2 SUMO-conjugating enzyme UBC9 SWI/SNF global transcription activator complex subunit SWP82 Ubiquitin-like protein SMT3 mRNA export factor GLE2	P02309 P14907 P20676 P32499 P32500 P32561 P34077 P35729 P36161 P38181 P40066 P40368 P40517 P41920 P43554 P46673 P47054 P48837 P49686 P50623 P52593 P52891 P53011 P53973 Q02455 Q02630 Q04195 Q04491 Q05166 Q12306	ANU3 ASM4 CST20 GLE2 HDA1 HHF1 HHF2 HTN1 MLP1 MOF6 NDC1 NIC96 NLE3 NSP1 NSP116 NUP1 NUP116 NUP120 NUP133 NUP170 NUP188 NUP192 NUP2 NUP42 NUP57 NUP59 NUP82 NUP84 NUP85 RAE1 RAT2 RAT3 RAT9 REC3 RIP1 RPD3 SDI2 SDS6 SEC13 SEH1 SFO1 SIZ1 SMT3 SWP82 UBC9 UIP1 ULL1 YRB1 YRB2	Saccharomyces cerevisiae (brewer's yeast)
Calnexin/calreticulin cycle	Calnexin homolog Protein disulfide-isomerase	P17967 P27825	CNE1 MFP1 PDI1 TRG1	Saccharomyces cerevisiae (brewer's yeast)
COPI-dependent Golgi-to-ER retrograde traffic	ADP-ribosylation factor 1 ADP-ribosylation factor 2 ADP-ribosylation factor GTPase-activating protein GCS1 ADP-ribosylation factor GTPase-activating protein GLO3 ARF guanine-nucleotide exchange factor 2 Alpha-soluble NSF attachment protein Coatomer subunit alpha Coatomer subunit beta' Coatomer subunit beta Coatomer subunit delta Coatomer subunit epsilon Coatomer subunit gamma Coatomer subunit zeta ER lumen protein-retaining receptor ER-derived vesicles protein ERV29 Endoplasmic reticulum vesicle protein 25 Endosomal protein P24B GTP-binding protein YPT11 GTP-binding protein YPT1 Protein ERP1 Protein ERP2 Protein ERP3 Protein ERP4 Protein ERP5 Protein ERP6 Protein transport protein DSL1 Protein transport protein SEC20 Protein transport protein SEC22 Protein transport protein TIP20 Protein transport protein USE1 Sporulation protein SPS18 Syntaxin UFE1 Vesicular-fusion protein SEC18	P01123 P11076 P18414 P18759 P19146 P22214 P28791 P32074 P32572 P32602 P32803 P33891 P35197 P38682 P38819 P39704 P39993 P40509 P41810 P41811 P41834 P43621 P48559 P53146 P53198 P53337 P53600 P53622 P53847 P54837 Q05359 Q12403 Q12450	ARF1 ARF2 COP1 DSL1 EMP24 ERD2 ERP1 ERP2 ERP3 ERP4 ERP5 ERP6 ERV25 ERV29 GCS1 GEA2 GLO3 RET1 RET2 RET3 SEC17 SEC18 SEC20 SEC21 SEC22 SEC26 SEC27 SEC28 SEC33 SLT1 SLY2 SOO1 SPS18 SPX18 TIP1 TIP20 TSL26 UFE1 USE1 YP2 YPT1 YPT11	Saccharomyces cerevisiae (brewer's yeast)
Synthesis of very long-chain fatty acyl-CoAs	Fatty acid elongase 1 Fatty acid elongase 2 Fatty acid elongase 3 Long-chain-fatty-acid--CoA ligase 1 Long-chain-fatty-acid--CoA ligase 2 Long-chain-fatty-acid--CoA ligase 3 Long-chain-fatty-acid--CoA ligase 4 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PHS1 Very-long-chain enoyl-CoA reductase	P25358 P30624 P39002 P39518 P39540 P40319 P40857 P47912 Q99190	APA1 ELO1 ELO2 ELO3 FAA1 FAA2 FAA3 FAA4 FAM1 FEN1 GNS1 PHS1 SRE1 SUR4 TSC13 VBM1 VBM2	Saccharomyces cerevisiae (brewer's yeast)
HDL remodeling	Uncharacterized ABC transporter ATP-binding protein/permease YOL075C Uncharacterized protein YJR098C	P47139 Q08234	YJR098C YOL075C	Saccharomyces cerevisiae (brewer's yeast)
trans-Golgi Network Vesicle Budding	ADP-ribosylation factor 1 ADP-ribosylation factor 2 ARF guanine-nucleotide exchange factor 2 Protein SSO1 Protein SSO2 Protein transport protein SEC9 Sporulation-specific protein 20 Vacuolar v-SNARE NYV1	P11076 P19146 P32867 P39926 P39993 P40357 Q04359 Q12255	ARF1 ARF2 GEA2 HSS7 MAM2 NYV1 SEC9 SPO20 SSO1 SSO2	Saccharomyces cerevisiae (brewer's yeast)
CD28 dependent PI3K/Akt signaling	Probable target of rapamycin complex 2 subunit BIT2 Serine/threonine-protein kinase BCK1/SLK1/SSP31 Serine/threonine-protein kinase PKH2 Serine/threonine-protein kinase SCH9 Serine/threonine-protein kinase TOR2 Serine/threonine-protein kinase YPK1 Target of rapamycin complex 2 subunit AVO1 Target of rapamycin complex 2 subunit BIT61 Target of rapamycin complex 2 subunit TSC11 Target of rapamycin complex subunit LST8	P11792 P12688 P32600 P38346 P40061 P41318 P47041 Q01389 Q08236 Q12236	AVO1 AVO3 BCK1 BIT2 BIT61 DRR2 KOM1 LAS3 LST8 PKH2 SCH9 SLI2 SLK1 SSP31 TOR2 TSC11 TSC14 YPK1	Saccharomyces cerevisiae (brewer's yeast)
RHOA GTPase cycle	Actin GTP-binding protein RHO1 GTPase-activating protein BEM3 GTPase-activating protein SAC7 Mitochondrial acidic protein MAM33 Phospholipase D1 Protein ECM25 Protein SLY1 Protein kinase C-like 1 Protein transport protein SEC9 Putative zinc metalloprotease TRE2 Ras GTPase-activating-like protein IQG1 Rho GDP-dissociation inhibitor Rho-GTPase-activating protein BAG7 Sporulation-specific protein 20 UBX domain-containing protein 2 Uncharacterized protein TRE1 Vacuolar protein sorting-associated protein 70	P06780 P17121 P22213 P24583 P32525 P32873 P36126 P40357 P40513 P47161 P60010 Q04228 Q04359 Q08693 Q08919 Q12128 Q12280 Q12434	ABY1 ACT1 BAG7 BEM3 CYK1 ECM25 END7 HPO2 HSS7 IQG1 MAM33 PKC1 PLD1 RDI1 RHO1 SAC7 SEC9 SEL1 SLY1 SPO14 SPO20 STT1 TRE1 TRE2 UBX2 VPS70	Saccharomyces cerevisiae (brewer's yeast)
Integrin signaling	Bud site selection protein 5 Cell division control protein 25 Guanine nucleotide exchange factor LTE1 Ras-related protein RSR1	P04821 P07866 P13856 P25300	BUD1 BUD5 CDC25 CTN1 EIS4 LTE1 MSI2 RSR1	Saccharomyces cerevisiae (brewer's yeast)
Ciprofloxacin ADME	Probable ATP-dependent permease	P25371	ADP1	Saccharomyces cerevisiae (brewer's yeast)
RAB GEFs exchange GTP for GDP on RABs	GTP-binding protein YPT10 GTP-binding protein YPT11 GTP-binding protein YPT1 GTP-binding protein YPT52 GTP-binding protein YPT53 GTP-binding protein YPT6 Guanine nucleotide exchange factor subunit RGP1 Guanine nucleotide exchange factor subunit RIC1 Protein MUK1 Rab GDP-dissociation inhibitor Rab guanine nucleotide exchange factor SEC2 Rab proteins geranylgeranyltransferase component A Ras-related protein SEC4 TRAPP-associated protein TCA17 Trafficking protein particle complex II-specific subunit 120 Trafficking protein particle complex II-specific subunit 130 Trafficking protein particle complex subunit 20 Trafficking protein particle complex subunit 23 Trafficking protein particle complex subunit 31 Trafficking protein particle complex subunit 33 Trafficking protein particle complex subunit BET3 Trafficking protein particle complex subunit BET5 Vacuolar fusion protein CCZ1 Vacuolar fusion protein MON1 Vacuolar protein sorting-associated protein 21 Vacuolar protein sorting-associated protein 9 Ypt/Rab-type GTPase YPT7	P01123 P07560 P16664 P17065 P32613 P32864 P32939 P36017 P36018 P36019 P36149 P38146 P38273 P38334 P39958 P40395 P48559 P53129 P54787 Q02866 Q03337 Q03630 Q03660 Q03784 Q04183 Q99260 Q99394	AUT11 AUT12 BET3 BET5 CCZ1 CVT16 GDI1 MON1 MRS6 MSI4 MUK1 RGP1 RIC1 SEC19 SEC2 SEC4 SRO6 TCA17 TRS120 TRS130 TRS20 TRS23 TRS31 TRS33 VAM4 VPS12 VPS21 VPS9 VPT12 VPT9 YP2 YPT1 YPT10 YPT11 YPT21 YPT51 YPT52 YPT53 YPT6 YPT7	Saccharomyces cerevisiae (brewer's yeast)
SUMOylation of SUMOylation proteins	E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ2 Nucleoporin ASM4 Nucleoporin NDC1 Nucleoporin NIC96 Nucleoporin NSP1 Nucleoporin NUP116/NSP116 Nucleoporin NUP120 Nucleoporin NUP133 Nucleoporin NUP170 Nucleoporin NUP188 Nucleoporin NUP192 Nucleoporin NUP1 Nucleoporin NUP2 Nucleoporin NUP42 Nucleoporin NUP57 Nucleoporin NUP82 Nucleoporin NUP84 Nucleoporin NUP85 Nucleoporin SEH1 Protein MLP1 Protein transport protein SEC13 Ran-specific GTPase-activating protein 1 Ran-specific GTPase-activating protein 2 SUMO-conjugating enzyme UBC9 Ubiquitin-like protein SMT3 mRNA export factor GLE2	P14907 P20676 P32499 P32500 P34077 P35729 P36161 P38181 P40066 P40368 P40517 P41920 P46673 P47054 P48837 P49686 P50623 P52593 P52891 P53011 Q02455 Q02630 Q04195 Q04491 Q05166 Q12216 Q12306	ANU3 ASM4 CST20 GLE2 HTN1 MLP1 NDC1 NFI1 NIC96 NLE3 NSP1 NSP116 NUP1 NUP116 NUP120 NUP133 NUP170 NUP188 NUP192 NUP2 NUP42 NUP57 NUP59 NUP82 NUP84 NUP85 RAE1 RAT2 RAT3 RAT9 RIP1 SEC13 SEH1 SFO1 SIZ1 SIZ2 SMT3 UBC9 UIP1 ULL1 YRB1 YRB2	Saccharomyces cerevisiae (brewer's yeast)

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