GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **201 - 225** of **250** in total

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Pathway Name	Protein Name	UniProt ID	Gene Symbol	Organism ▲	GlyTouCan ID
IRE1alpha activates chaperones	Serine/threonine-protein kinase/endoribonuclease IRE1	P32361	ERN1 IRE1	Saccharomyces cerevisiae (brewer's yeast)
Detoxification of Reactive Oxygen Species	Cytochrome c isoform 1 Cytochrome c isoform 2 Glutathione reductase Peroxiredoxin AHP1 Peroxiredoxin TSA1 Peroxiredoxin TSA2 Peroxisomal catalase A Probable ferric reductase transmembrane component 8 Probable metalloreductase AIM14 Superoxide dismutase 1 copper chaperone Superoxide dismutase [Cu-Zn] Superoxide dismutase [Mn], mitochondrial Thioredoxin-1 Thioredoxin-2 Thioredoxin-3, mitochondrial	P00044 P00045 P00445 P00447 P15202 P22217 P22803 P25372 P34760 P38013 P40202 P41921 P53109 Q04120 Q12209	AHP1 AIM14 CCS1 CTA1 CYC1 CYC7 CYP3 FRE8 GLR1 LYS7 SOD1 SOD2 TPX1 TRX1 TRX2 TRX3 TSA TSA1 TSA2 ZRG14	Saccharomyces cerevisiae (brewer's yeast)
The NLRP3 inflammasome	ATP-dependent molecular chaperone HSP82 Arrestin-related trafficking adapter 3 Arrestin-related trafficking adapter 5 Arrestin-related trafficking adapter 6 Protein ECM21 Protein LDB19 Protein ROD1 Protein ROG3 Protein SGT1 Thioredoxin-1 Thioredoxin-2 Thioredoxin-3, mitochondrial Transcription factor CSR2 pH-response regulator protein palF/RIM8	P02829 P22217 P22803 P25372 P36117 P38167 P43602 P47029 P53179 P53244 Q02805 Q08446 Q12502 Q12734	ALY1 ALY2 ART3 ART5 ART6 CSR2 ECM21 HSP82 HSP90 LDB19 MRG19 PAL3 RIM8 ROD1 ROG3 SGT1 TRX1 TRX2 TRX3	Saccharomyces cerevisiae (brewer's yeast)
Multifunctional anion exchangers	Sulfate permease 1 Sulfate permease 2	P38359 Q12325	SEL2 SFP2 SUL1 SUL2	Saccharomyces cerevisiae (brewer's yeast)
Neutrophil degranulation	1-acyl-sn-glycerol-3-phosphate acyltransferase 26S proteasome regulatory subunit 6A 26S proteasome regulatory subunit 7 homolog 26S proteasome regulatory subunit RPN1 26S proteasome regulatory subunit RPN2 26S proteasome regulatory subunit RPN3 26S proteasome regulatory subunit RPN5 26S proteasome regulatory subunit RPN6 26S proteasome regulatory subunit RPN7 26S proteasome regulatory subunit RPN8 26S proteasome regulatory subunit RPN9 3-ketoacyl-CoA thiolase, peroxisomal AMP deaminase AP-1 complex subunit mu-1-I AP-2 complex subunit alpha ARS-binding factor 2, mitochondrial ATP-dependent 6-phosphofructokinase subunit alpha ATP-dependent 6-phosphofructokinase subunit beta ATP-dependent DNA helicase II subunit 1 ATP-dependent DNA helicase II subunit 2 ATP-dependent RNA helicase DED1 ATP-dependent molecular chaperone HSC82 ATP-dependent molecular chaperone HSP82 Actin-related protein 2/3 complex subunit 5 Actin-related protein 2 Adenine phosphoribosyltransferase 1 Adenylyl cyclase-associated protein Arginase CTD kinase subunit alpha Calcium permeable stress-gated cation channel 1 Casein kinase II subunit beta' Cell division control protein 48 Centractin Coatomer subunit beta Cytidine deaminase DOCK-like protein 1 Damage response protein 1 Delta-aminolevulinic acid dehydratase DnaJ-like chaperone JEM1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST6 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit WBP1 Dynein heavy chain, cytoplasmic Dynein light chain 1, cytoplasmic E3 ubiquitin-protein ligase TOM1 ER-derived vesicles protein ERV29 ER-retained PMA1-suppressing protein 1 Ectonucleotide pyrophosphatase/phosphodiesterase 1 Ectonucleotide pyrophosphatase/phosphodiesterase 2 Elongation factor 1 alpha-like protein Elongation factor 1-alpha Elongation factor 2 Fatty aldehyde dehydrogenase HFD1 GTP-binding protein RHO1 GTP-binding protein RHO2 GTP-binding protein RHO3 GTP-binding protein RHO4 GTP-binding protein YPT10 GTP-binding protein YPT52 GTP-binding protein YPT53 GTP-binding protein YPT6 GTPase-activating protein BEM3 GTPase-activating protein SAC7 Glucokinase-1 Glucose-6-phosphate isomerase Glycogen debranching enzyme Glycogen phosphorylase Glycogenin-1 Glycogenin-2 Heat shock protein SSA1 Heat shock protein SSA2 Heat shock protein SSA3 Heat shock protein SSA4 Hexokinase-1 Hexokinase-2 High mobility group protein 1 IME2-dependent-signaling protein Importin subunit beta-1 Inactive deaminase YBR284W Inactive deaminase YJL070C Increased sodium tolerance protein 2 Inosine-5'-monophosphate dehydrogenase 2 Inosine-5'-monophosphate dehydrogenase 3 Inosine-5'-monophosphate dehydrogenase 4 Intrastrand cross-link recognition protein Isocitrate dehydrogenase [NADP], mitochondrial Kinetochore-associated protein DSN1 Leucine aminopeptidase 2 Methyltransferase OMS1, mitochondrial Mitogen-activated protein kinase FUS3 Mitogen-activated protein kinase HOG1 Mitogen-activated protein kinase KSS1 Mitogen-activated protein kinase SLT2/MPK1 N-acetylglucosamine kinase NADH-cytochrome b5 reductase 1 Negative regulator of sporulation MDS3 Negative regulator of sporulation PMD1 Nicotinate phosphoribosyltransferase Non-histone chromosomal protein 6A Non-histone protein 10 Nucleoside diphosphate kinase Omega-amidase NIT3 Peptide transporter PTR2 Peroxiredoxin PRX1, mitochondrial Peroxiredoxin TSA1 Peroxiredoxin TSA2 Peroxisomal catalase A Phosphate metabolism protein 7 Phosphatidylglycerol/phosphatidylinositol transfer protein Phosphoglucomutase 1 Phosphoglucomutase 2 Phospholipase D1 Phospholipid-transporting ATPase DNF1 Phospholipid-transporting ATPase DRS2 Phospholipid-transporting ATPase accessory subunit CDC50 Phosphoribomutase Probable ferric reductase transmembrane component 8 Probable metabolite transport protein YBR241C Probable metalloprotease ARX1 Probable metalloreductase AIM14 Probable phospholipid-transporting ATPase DNF3 Proteasome subunit alpha type-2 Proteasome subunit alpha type-5 Proteasome subunit beta type-2 Protein AIM7 Protein HYM1 Protein ORM1 Protein ORM2 Protein kinase C-like 1 Protein transport protein SEC9 Purine nucleoside phosphorylase Putative glucokinase-2 Putative pyridoxal kinase BUD16 Pyruvate kinase 1 Pyruvate kinase 2 Rab GDP-dissociation inhibitor Ras GTPase-activating-like protein IQG1 Ras modification protein ERF4 Ras-related protein RSR1 Ras-related protein SEC4 Ribonuclease T2-like Ribosome-associated molecular chaperone SSB1 Ribosome-associated molecular chaperone SSB2 Serine/threonine-protein kinase BUR1 Signal recognition particle subunit SRP14 Sporulation-specific chitinase 2 Sporulation-specific mitogen-activated protein kinase SMK1 Sporulation-specific protein 20 Sporulation-specific protein 75 T-complex protein 1 subunit beta T-complex protein 1 subunit theta Trafficking protein particle complex subunit BET5 Transgelin Tyrosine-protein phosphatase 1 Tyrosine-protein phosphatase 2 Tyrosine-protein phosphatase 3 UBX domain-containing protein 2 Ubiquitin carboxyl-terminal hydrolase RPN11 Ubiquitin-binding protein CUE5 Ubiquitin-like modifier-activating enzyme ATG7 Uncharacterized protein RSN1 Uncharacterized protein YFR018C V-type proton ATPase subunit D V-type proton ATPase subunit a, Golgi isoform V-type proton ATPase subunit a, vacuolar isoform V-type proton ATPase subunit c Vacuolar import and degradation protein 28 Vacuolar protein sorting-associated protein 21 Vacuolar protein sorting-associated protein 73 Vacuolar protein sorting-associated protein IST1 Very long-chain fatty acid transport protein Vesicle-associated membrane protein-associated protein SCS2 Ypt/Rab-type GTPase YPT7 [PSI+] inducibility protein 3	P00549 P00812 P02829 P02994 P04806 P04807 P05373 P06634 P06738 P06780 P06781 P07560 P09435 P10591 P10592 P11484 P11632 P12709 P13856 P14681 P15108 P15202 P15274 P16861 P16862 P16892 P17121 P17555 P17709 P21954 P22202 P23293 P23639 P24583 P25043 P25044 P25353 P25515 P25656 P25694 P27796 P29461 P32324 P32379 P32381 P32464 P32485 P32563 P32565 P32610 P32634 P32660 P32769 P32807 P32873 P32901 P32939 P33297 P33299 P33333 P33401 P33417 P33767 P34227 P34760 P36010 P36017 P36018 P36019 P36022 P36126 P36143 P37012 P37296 P38065 P38142 P38146 P38150 P38225 P38250 P38626 P38696 P38697 P38764 P38862 P38930 P38985 P39076 P39524 P39683 P39958 P39988 P39997 P40016 P40048 P40075 P40150 P40357 P40358 P40361 P40518 P40547 P40557 P40568 P41808 P41810 P41912 P43588 P43599 P46958 P47011 P47079 P48439 P49435 P49954 P50094 P50095 P52489 P53094 P53109 P53142 P53224 P53337 P53843 Q00245 Q00246 Q00772 Q00776 Q02486 Q02647 Q02933 Q03262 Q03280 Q03435 Q03516 Q03630 Q03723 Q03862 Q03957 Q03973 Q04062 Q04120 Q04228 Q04359 Q04409 Q04437 Q04458 Q05788 Q06103 Q06142 Q06144 Q06204 Q06350 Q06409 Q06449 Q06538 Q06549 Q06625 Q06668 Q07798 Q08412 Q08723 Q08873 Q10740 Q12091 Q12156 Q12209 Q12250 Q12252 Q12280 Q12377 Q12408 Q12674 Q99260	ABF2 ACT2 ACT3 ACT5 AIM14 AIM7 AMD AMD1 APG7 APL3 APM1 APT1 ARC15 ARP1 ARP2 ARX1 ATG7 BEM3 BET5 BIN3 BUD1 BUD16 BUR1 CAP1 CAR1 CBR CBR1 CBR5 CCT2 CCT8 CDC19 CDC48 CDC50 CDD1 CIM5 CKB2 CLS7 CSC1 CTA1 CTK1 CTS2 CUE5 CUP5 CVT2 CYK1 DAC2 DAP1 DCK1 DED1 DHC1 DNF1 DNF3 DOA5 DRS2 DSN1 DYN1 DYN2 EFT1 EFT2 EMI2 EPS1 ERF4 ERV29 FAT1 FOX3 FRE8 FUS3 GA-5 GAL5 GDB1 GDI1 GEF2 GID5 GLG1 GLG2 GLK1 GPH1 HBS1 HDF1 HDF2 HEM2 HEX1 HFD1 HIM1 HKA HKB HMO1 HMO2 HOG1 HOR3 HPO2 HRD2 HSC82 HSM2 HSP82 HSP90 HSS7 HXK1 HXK2 HYM1 IDP1 IDS2 IMD2 IMD3 IMD4 IQG1 IST1 IST2 IXR1 JEM1 KAP95 KAR8 KSS1 LAP2 LSB2 MDS3 MPK1 MPR1 NAS1 NAS4 NAS5 NAS7 NDK1 NES24 NGK1 NHP10 NHP6A NHPA NIT3 NPC2 NPP1 NPP2 NPT1 OMS1 ORD1 ORM1 ORM2 OST3 OST6 PFK1 PFK2 PGI1 PGM1 PGM2 PGM3 PHM7 PIN3 PKC1 PLD1 PMD1 PNP1 POT1 POX3 PRE8 PRM15 PRS4 PRX1 PTP1 PTP2 PTP3 PTR2 PUP1 PUP2 PUR5 PYK1 PYK2 RHO1 RHO2 RHO3 RHO4 RNY1 RPD1 RPN1 RPN11 RPN2 RPN3 RPN5 RPN6 RPN7 RPN8 RPN9 RPT1 RPT5 RSN1 RSR1 SAC7 SCP1 SCS2 SEC19 SEC26 SEC4 SEC9 SEL1 SEN3 SGV1 SHR5 SLC1 SLT2 SMK1 SPO14 SPO20 SPO75 SPP81 SRO6 SRP14 SRV2 SSA1 SSA2 SSA3 SSA4 SSB1 SSB2 SSK3 SSR2 STT1 STV1 SUN2 SWA3 SWA4 TCP2 TEF1 TEF2 TOM1 TPX1 TSA TSA1 TSA2 UBX2 VAM4 VID28 VMA3 VMA8 VPH1 VPS12 VPS21 VPS73 VPT12 WBP1 YAP54 YBR241C YBR284W YFR018C YG101 YG103 YJL070C YKU70 YKU80 YNK YNK1 YPT10 YPT21 YPT51 YPT52 YPT53 YPT6 YPT7 YTA1 YTA3 ZRG14	Saccharomyces cerevisiae (brewer's yeast)
Regulation of PTEN stability and activity	26S proteasome regulatory subunit 4 homolog 26S proteasome regulatory subunit 6A 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 7 homolog 26S proteasome regulatory subunit 8 homolog 26S proteasome regulatory subunit RPN12 26S proteasome regulatory subunit RPN1 26S proteasome regulatory subunit RPN2 26S proteasome regulatory subunit RPN3 26S proteasome regulatory subunit RPN5 26S proteasome regulatory subunit RPN6 26S proteasome regulatory subunit RPN7 26S proteasome regulatory subunit RPN8 26S proteasome regulatory subunit RPN9 26S proteasome subunit RPT4 Casein kinase II subunit alpha' Casein kinase II subunit alpha Casein kinase II subunit beta' E3 ubiquitin-protein ligase RSP5 Polyubiquitin Probable 26S proteasome regulatory subunit p27 Probable phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TEP1 Probable proteasome subunit alpha type-7 Proteasome activator BLM10 Proteasome subunit alpha type-1 Proteasome subunit alpha type-2 Proteasome subunit alpha type-3 Proteasome subunit alpha type-4 Proteasome subunit alpha type-5 Proteasome subunit alpha type-6 Proteasome subunit beta type-1 Proteasome subunit beta type-2 Proteasome subunit beta type-3 Proteasome subunit beta type-4 Proteasome subunit beta type-5 Proteasome subunit beta type-7 Ubiquitin carboxyl-terminal hydrolase RPN11	P0CG63 P15790 P19454 P21242 P21243 P22141 P23638 P23639 P25043 P25451 P30656 P30657 P32379 P32496 P32565 P33297 P33298 P33299 P38624 P38764 P38930 P39940 P40016 P40302 P40303 P40327 P40555 P43583 P43588 P53549 P53916 Q01939 Q04062 Q06103 Q08723 Q12250 Q12377	BLM10 BLM3 CIM3 CIM5 CKA1 CKA2 CKB2 CRL13 CRL3 DOA3 DOA5 HRD2 MDP1 MPR1 NAS1 NAS2 NAS4 NAS5 NAS7 NIN1 NPI1 PCS1 PRC1 PRC2 PRE1 PRE10 PRE2 PRE3 PRE4 PRE5 PRE6 PRE8 PRE9 PRG1 PRS1 PRS2 PRS4 PRS5 PUP1 PUP2 PUP3 RPD1 RPN1 RPN11 RPN12 RPN2 RPN3 RPN5 RPN6 RPN7 RPN8 RPN9 RPT1 RPT2 RPT3 RPT4 RPT5 RPT6 RSP5 SCD2 SCL1 SEN3 SUG1 SUG2 SUN2 TBPY TBY1 TEP1 UBI4 YHS4 YNT1 YTA1 YTA2 YTA3 YTA5	Saccharomyces cerevisiae (brewer's yeast)
Branched-chain amino acid catabolism	Branched-chain-amino-acid aminotransferase, cytosolic Branched-chain-amino-acid aminotransferase, mitochondrial Small ribosomal subunit protein mS47	P28817 P38891 P47176	BAT1 BAT2 ECA39 EHD3 MRP5 TWT1 TWT2	Saccharomyces cerevisiae (brewer's yeast)
Assembly of the pre-replicative complex	DNA replication licensing factor MCM2 DNA replication licensing factor MCM3 DNA replication licensing factor MCM4 DNA replication licensing factor MCM6 DNA replication licensing factor MCM7 Minichromosome maintenance protein 5	P24279 P29469 P29496 P30665 P38132 P53091	CDC46 CDC47 CDC54 HCD21 MCM2 MCM3 MCM4 MCM5 MCM6 MCM7	Saccharomyces cerevisiae (brewer's yeast)
Cellular hexose transport	Probable metabolite transport protein YBR241C Vacuolar protein sorting-associated protein 73	P38142 P53142	VPS73 YBR241C	Saccharomyces cerevisiae (brewer's yeast)	G58161NS
RHO GTPases Activate NADPH Oxidases	Bud emergence protein 1 Peptidyl-prolyl cis-trans isomerase ESS1 Phosphatidylinositol 3-kinase VPS34 Protein kinase C-like 1 Serine/threonine-protein kinase VPS15	P22219 P22543 P22696 P24583 P29366	BEM1 END12 ESS1 GRD8 HPO2 PEP15 PIN1 PKC1 PTF1 SRO1 STT1 VAC4 VPL19 VPL7 VPS15 VPS34 VPT29	Saccharomyces cerevisiae (brewer's yeast)
Clathrin-mediated endocytosis	AP-1 complex subunit beta-1 AP-2 complex subunit alpha AP-2 complex subunit beta AP-2 complex subunit mu AP-2 complex subunit sigma Actin cytoskeleton-regulatory complex protein END3 Actin cytoskeleton-regulatory complex protein PAN1 Clathrin heavy chain Clathrin light chain Cytokinesis protein 2 EH domain-containing and endocytosis protein 1 Increased rDNA silencing protein 4 Phosphatidylinositol 4-phosphate 5-kinase MSS4 Rho-GTPase-activating protein RGD2 Suppressor of yeast profilin deletion	P17891 P22137 P25623 P27351 P32521 P34216 P36000 P36115 P38065 P38994 P39013 P43556 Q00381 Q05080 Q99186	AMP1 APL1 APL2 APL3 APM4 APS2 BUD15 CHC1 CLC1 CYK2 DIM2 EDE1 END3 HOF1 IRS4 MDP3 MIP3 MSS4 PAN1 RGD2 SYP1 YAP17 YAP80	Saccharomyces cerevisiae (brewer's yeast)
RNA Polymerase II Promoter Escape	Cyclin CCL1 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB/SSL2 General transcription and DNA repair factor IIH subunit SSL1 General transcription and DNA repair factor IIH subunit TFB1 General transcription and DNA repair factor IIH subunit TFB2 General transcription and DNA repair factor IIH subunit TFB4 General transcription and DNA repair factor IIH subunit TFB5 Protein SPT3 RNA polymerase II transcription factor B subunit 3 Serine/threonine-protein kinase KIN28 TATA-box-binding protein Transcription initiation factor IIA large subunit Transcription initiation factor IIA subunit 2 Transcription initiation factor IIB Transcription initiation factor IIE subunit alpha Transcription initiation factor IIE subunit beta Transcription initiation factor IIF subunit alpha Transcription initiation factor IIF subunit beta Transcription initiation factor TFIID subunit 10 Transcription initiation factor TFIID subunit 11 Transcription initiation factor TFIID subunit 12 Transcription initiation factor TFIID subunit 13 Transcription initiation factor TFIID subunit 1 Transcription initiation factor TFIID subunit 2 Transcription initiation factor TFIID subunit 4 Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 6 Transcription initiation factor TFIID subunit 7 Transcription initiation factor TFIID subunit 9	P04050 P06242 P06839 P06844 P08518 P11747 P13393 P16370 P20433 P20434 P20435 P20436 P22139 P23255 P27999 P29055 P32773 P32774 P32776 P34087 P36100 P36145 P37366 P38129 P38902 P40422 P41895 P41896 P46677 P50105 P53040 Q00578 Q02939 Q03290 Q03761 Q04226 Q04673 Q05021 Q05027 Q12004 Q12030 Q3E7C1	BTF1 CCL1 FUN81 KIN28 LOM3 MPT1 RAD25 RAD3 REM1 RIG2 RPA7 RPB1 RPB10 RPB11 RPB12 RPB150 RPB2 RPB220 RPB3 RPB4 RPB5 RPB6 RPB7 RPB8 RPB9 RPC10 RPC9 RPO21 RPO22 RPO26 SPT15 SPT3 SSL1 SSL2 SSU71 SUA7 SUA8 TAF1 TAF10 TAF11 TAF12 TAF13 TAF130 TAF145 TAF150 TAF17 TAF19 TAF2 TAF23 TAF25 TAF4 TAF40 TAF48 TAF5 TAF6 TAF60 TAF61 TAF67 TAF68 TAF7 TAF9 TAF90 TBP1 TFA1 TFA2 TFB1 TFB2 TFB3 TFB4 TFB5 TFG1 TFG2 TOA1 TOA2 TSG2 TSM1 UVS112	Saccharomyces cerevisiae (brewer's yeast)
Estrogen-dependent gene expression	ATP-dependent RNA helicase DBP2 CTD kinase subunit alpha CTD kinase subunit beta DNA damage-responsive transcriptional repressor RPH1 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 Fork head protein homolog 1 Forkhead transcription factor HCM1 Histone H2A.1 Histone H2A.2 Histone H2A.Z Histone H2B.1 Histone H2B.2 Histone H3-like centromeric protein CSE4 Histone H3 Histone H4 Histone acetyltransferase ESA1 Histone acetyltransferase GCN5 Histone deacetylase RPD3 Nitrogen regulatory protein DAL80 Nitrogen regulatory protein GLN3 Polyamine oxidase FMS1 Protein BUR2 Protein GZF3 Protein arginine N-methyltransferase 1 TATA-box-binding protein Transcription initiation factor IIA large subunit Transcription initiation factor IIA subunit 2 Transcription initiation factor IIF subunit alpha Transcription initiation factor IIF subunit beta Transcriptional activator/repressor GIS1 Transcriptional regulator NRG1 Transcriptional regulatory protein GAT1	P02293 P02294 P02309 P04050 P04911 P04912 P08518 P13393 P16370 P18494 P20433 P20434 P20435 P20436 P22139 P24783 P25364 P26343 P27999 P32561 P32773 P32774 P34087 P36012 P38074 P38902 P39956 P40422 P40466 P41895 P41896 P42944 P43574 P46962 P50264 P61830 Q03125 Q03330 Q03833 Q03957 Q05949 Q08649 Q12692	ADA4 BTF1 BUR2 CSE4 CSL2 CST4 CTK1 CTK2 DAL80 DBP2 ESA1 FKH1 FMS1 GAT1 GCN5 GIS1 GLN3 GZF3 H2A1 H2A2 H2AZ H2B1 H2B2 HCM1 HHF1 HHF2 HHT1 HHT2 HMT1 HTA1 HTA2 HTA3 HTB1 HTB2 HTZ1 MOF6 MSS1 NRG1 ODP1 REC3 RMT1 RPA7 RPB1 RPB10 RPB11 RPB12 RPB150 RPB2 RPB220 RPB3 RPB4 RPB5 RPB6 RPB7 RPB8 RPB9 RPC10 RPC9 RPD3 RPH1 RPO21 RPO22 RPO26 SDI2 SDS6 SIN2 SPT11 SPT12 SPT15 SSU71 SUA8 SWI9 TBP1 TFG1 TFG2 TOA1 TOA2 UGA43	Saccharomyces cerevisiae (brewer's yeast)
Acyl chain remodelling of PS	Lysophospholipase 1 Lysophospholipase 2 Lysophospholipase 3 Lysophospholipid acyltransferase Oxysterol-binding protein homolog 4 Oxysterol-binding protein homolog 5 Oxysterol-binding protein homolog 6 Oxysterol-binding protein homolog 7 Putative meiotic phospholipase SPO1	P35843 P35844 P38755 P39105 P53541 Q02201 Q03674 Q08108 Q08548	ALE1 BSR3 HES1 KES1 LCA1 LPT1 OSH4 OSH5 OSH6 OSH7 PLB1 PLB2 PLB3 SLC4 SPO1	Saccharomyces cerevisiae (brewer's yeast)
Transport and synthesis of PAPS	Adenylyl-sulfate kinase Sulfate permease 1 Sulfate permease 2	P38359 Q02196 Q12325	MET14 SEL2 SFP2 SUL1 SUL2	Saccharomyces cerevisiae (brewer's yeast)
Termination of translesion DNA synthesis	DNA polymerase epsilon catalytic subunit A DNA polymerase epsilon subunit B DNA polymerase epsilon subunit C DNA polymerase epsilon subunit D DNA polymerase eta DNA repair protein REV1 Polyubiquitin Proliferating cell nuclear antigen Protein DLS1 Replication factor A protein 1 Replication factor A protein 2 Replication factor C subunit 1 Replication factor C subunit 2 Replication factor C subunit 3 Replication factor C subunit 4 Replication factor C subunit 5 Ubiquitin carboxyl-terminal hydrolase 3	P0CG63 P12689 P15873 P21951 P22336 P24482 P26754 P27344 P38251 P38629 P38630 P40339 P40348 P40366 Q01477 Q04049 Q04603	BUF1 BUF2 CDC44 DBH1 DLS1 DPB2 DPB3 DPB4 DUN2 POL2 POL30 RAD30 REV1 RFA1 RFA2 RFC1 RFC2 RFC3 RFC4 RFC5 RPA1 SCD2 UBI4 UBP3	Saccharomyces cerevisiae (brewer's yeast)
Synthesis of PIPs at the early endosome membrane	Phosphatidylinositol 3-kinase VPS34 Phosphatidylinositol 4-kinase LSB6 Phosphoinositide 3-phosphatase Serine/threonine-protein kinase VPS15	P22219 P22543 P42951 P47147	END12 GRD8 LSB6 PEP15 VAC4 VPL19 VPL7 VPS15 VPS34 VPT29 YMR1	Saccharomyces cerevisiae (brewer's yeast)
ABC transporters in lipid homeostasis	Peroxisomal biogenesis factor 3 Peroxisomal long-chain fatty acid import protein 1 Peroxisomal long-chain fatty acid import protein 2 Peroxisomal membrane protein import receptor PEX19 Probable ATP-dependent permease Uncharacterized ABC transporter ATP-binding protein/permease YOL075C	P25371 P28795 P34230 P41909 Q07418 Q08234	ADP1 PAL1 PAS12 PAS3 PAT1 PAT2 PEX19 PEX3 PXA1 PXA2 SSH2 YOL075C	Saccharomyces cerevisiae (brewer's yeast)
Thyroxine biosynthesis	Probable ferric reductase transmembrane component 8 Probable metalloreductase AIM14	P53109 Q12209	AIM14 FRE8	Saccharomyces cerevisiae (brewer's yeast)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)	ATP-dependent RNA helicase FAL1 ATP-dependent helicase NAM7 EST/SMG-like protein 1 EST/SMG-like protein 2 Eukaryotic initiation factor 4F subunit p150 Eukaryotic peptide chain release factor GTP-binding subunit Eukaryotic peptide chain release factor subunit 1 Large ribosomal subunit protein P1A Large ribosomal subunit protein P2A Large ribosomal subunit protein eL13B Large ribosomal subunit protein eL14B Large ribosomal subunit protein eL15A Large ribosomal subunit protein eL15B Large ribosomal subunit protein eL18A Large ribosomal subunit protein eL18B Large ribosomal subunit protein eL19 Large ribosomal subunit protein eL19A Large ribosomal subunit protein eL20A Large ribosomal subunit protein eL20B Large ribosomal subunit protein eL21A Large ribosomal subunit protein eL24A Large ribosomal subunit protein eL27A Large ribosomal subunit protein eL29 Large ribosomal subunit protein eL30 Large ribosomal subunit protein eL31A Large ribosomal subunit protein eL31B Large ribosomal subunit protein eL32 Large ribosomal subunit protein eL33A Large ribosomal subunit protein eL36A Large ribosomal subunit protein eL36B Large ribosomal subunit protein eL37A Large ribosomal subunit protein eL37B Large ribosomal subunit protein eL38 Large ribosomal subunit protein eL39 Large ribosomal subunit protein eL42A Large ribosomal subunit protein eL42B Large ribosomal subunit protein eL6A Large ribosomal subunit protein eL6B Large ribosomal subunit protein eL8B Large ribosomal subunit protein uL10 Large ribosomal subunit protein uL11A Large ribosomal subunit protein uL11B Large ribosomal subunit protein uL13A Large ribosomal subunit protein uL14A Large ribosomal subunit protein uL14B Large ribosomal subunit protein uL15 Large ribosomal subunit protein uL16 Large ribosomal subunit protein uL18 Large ribosomal subunit protein uL1A Large ribosomal subunit protein uL1B Large ribosomal subunit protein uL22A Large ribosomal subunit protein uL22B Large ribosomal subunit protein uL23 Large ribosomal subunit protein uL24A Large ribosomal subunit protein uL24B Large ribosomal subunit protein uL29A Large ribosomal subunit protein uL29B Large ribosomal subunit protein uL2A Large ribosomal subunit protein uL2B Large ribosomal subunit protein uL30A Large ribosomal subunit protein uL3 Large ribosomal subunit protein uL4A Large ribosomal subunit protein uL4B Large ribosomal subunit protein uL5A Large ribosomal subunit protein uL5B Large ribosomal subunit protein uL6B Nonsense-mediated mRNA decay factor EBS1 Nonsense-mediated mRNA decay protein 2 Nonsense-mediated mRNA decay protein 3 Nuclear cap-binding protein complex subunit 1 Nuclear cap-binding protein subunit 2 Polyubiquitin Protein PES4 Protein phosphatase PP2A regulatory subunit A Protein phosphatase PP2A regulatory subunit B Serine/threonine-protein phosphatase PP2A-1 catalytic subunit Small ribosomal subunit protein eS10A Small ribosomal subunit protein eS10B Small ribosomal subunit protein eS12 Small ribosomal subunit protein eS17A Small ribosomal subunit protein eS17B Small ribosomal subunit protein eS19A Small ribosomal subunit protein eS1B Small ribosomal subunit protein eS21B Small ribosomal subunit protein eS24A Small ribosomal subunit protein eS24B Small ribosomal subunit protein eS25A Small ribosomal subunit protein eS26A Small ribosomal subunit protein eS27A Small ribosomal subunit protein eS27B Small ribosomal subunit protein eS28B Small ribosomal subunit protein eS4A Small ribosomal subunit protein eS4B Small ribosomal subunit protein eS6A Small ribosomal subunit protein eS6B Small ribosomal subunit protein eS7A Small ribosomal subunit protein eS8A Small ribosomal subunit protein eS8B Small ribosomal subunit protein uS10 Small ribosomal subunit protein uS11B Small ribosomal subunit protein uS12A Small ribosomal subunit protein uS12B Small ribosomal subunit protein uS13A Small ribosomal subunit protein uS13B Small ribosomal subunit protein uS14A Small ribosomal subunit protein uS15 Small ribosomal subunit protein uS17A Small ribosomal subunit protein uS17B Small ribosomal subunit protein uS19 Small ribosomal subunit protein uS2A Small ribosomal subunit protein uS3 Small ribosomal subunit protein uS4A Small ribosomal subunit protein uS4B Small ribosomal subunit protein uS5 Small ribosomal subunit protein uS7 Small ribosomal subunit protein uS8A Small ribosomal subunit protein uS9A Small ribosomal subunit protein uS9B Telomere elongation protein EST1 Ubiquitin-ribosomal protein eS31 fusion protein	O13516 O14455 P02406 P02407 P04449 P04456 P04650 P05317 P05318 P05319 P05453 P05737 P05739 P05740 P05743 P05744 P05745 P05747 P05748 P05750 P05755 P05756 P05759 P07280 P0C0W1 P0C0W9 P0C0X0 P0C2H6 P0C2H8 P0C2H9 P0CG63 P0CX23 P0CX24 P0CX27 P0CX28 P0CX29 P0CX30 P0CX31 P0CX32 P0CX35 P0CX36 P0CX37 P0CX38 P0CX39 P0CX40 P0CX41 P0CX42 P0CX43 P0CX44 P0CX45 P0CX46 P0CX47 P0CX48 P0CX49 P0CX50 P0CX51 P0CX52 P0CX53 P0CX54 P0CX55 P0CX56 P0CX82 P0CX83 P0CX84 P0CX85 P10664 P12385 P14120 P14126 P14127 P17214 P23248 P23594 P25443 P26321 P26783 P26784 P26786 P29453 P30771 P31383 P32905 P34160 P35997 P36168 P38061 P38701 P38711 P38754 P38798 P39516 P39684 P39935 P39938 P40212 P40456 P41057 P41805 P46784 P46990 P48412 P48589 P49166 P49167 P49626 P51401 P51402 P53221 P54780 Q00362 Q01855 Q02326 Q02753 Q03466 Q08745 Q08920 Q12099 Q3E754 Q3E757 Q3E792	CBC1 CBC2 CBP20 CBP80 CDC55 CRY2 CYH2 EBS1 ESL1 ESL2 EST1 FAL1 GCR3 GRC5 GST1 IFS1 IFS2 KRB1 L10E L12EIB L12EIIA MAK18 MAK8 MOF4 MUD13 NAB1 NAB1A NAM7 NMD2 PES4 PLC2 PNM2 PPH21 QSR1 RP28A RP28B RP29 RP39A RP39B RP51A RP51B RP55A RP61R RPA0 RPA1 RPA2 RPL1 RPL10 RPL10A RPL10B RPL10E RPL11A RPL11B RPL12A RPL12B RPL13 RPL13A RPL13B RPL14B RPL15A RPL15B RPL16A RPL16B RPL17 RPL17A RPL17AA RPL17AB RPL17B RPL18A RPL18A1 RPL18A2 RPL18B RPL19A RPL19B RPL1A RPL1B RPL2 RPL20A RPL20B RPL21A RPL23A RPL23B RPL24A RPL25 RPL26 RPL26A RPL26B RPL27 RPL27A RPL28 RPL29 RPL2A RPL2B RPL3 RPL30 RPL30A RPL31A RPL31B RPL32 RPL33A RPL33B RPL34 RPL34A RPL34B RPL35A RPL35B RPL36A RPL36B RPL37A RPL37B RPL38 RPL39 RPL39A RPL39B RPL41A RPL41B RPL42A RPL42B RPL44 RPL46 RPL4A RPL4B RPL5 RPL5A RPL5B RPL6A RPL6B RPL7A RPL8A RPL8B RPL9B RPLA0 RPLA1 RPLA2 RPP0 RPP1A RPP2A RPS0A RPS101 RPS102 RPS10A RPS10B RPS11A RPS11B RPS12 RPS13 RPS13A RPS13B RPS13C RPS14A RPS14B RPS15 RPS16A RPS16AA RPS16B RPS17A RPS17B RPS18A RPS18B RPS19A RPS1B RPS2 RPS20 RPS21 RPS21B RPS22A RPS23A RPS23B RPS24 RPS24A RPS24B RPS24EA RPS24EB RPS25A RPS25B RPS26 RPS26A RPS26B RPS27A RPS27B RPS28A RPS28B RPS29A RPS3 RPS30 RPS31 RPS31A RPS33B RPS36A RPS37 RPS4 RPS4A RPS4B RPS5 RPS6A RPS6B RPS7A RPS7B RPS8A RPS8B RPS9A RPS9B SAE1 SAL3 SAL4 SCD2 SCL41A SCL41B SOS1 SOS2 SPB2 SSM1 SSM1A SSM1B SSM2 STO1 SUA1 SUA6 SUF12 SUF14 SUP1 SUP2 SUP35 SUP38 SUP44 SUP45 SUP46 SUT1 TCM1 TIF4631 TPD3 UBI3 UBI4 UPF1 UPF2 UPF3 URP1 URP2 YL10A YL10B YL14A YL14B YL16A YL16B YL43 YL8A YS11A YS29A YST1	Saccharomyces cerevisiae (brewer's yeast)
mRNA Capping	Cyclin CCL1 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB/SSL2 General transcription and DNA repair factor IIH subunit SSL1 General transcription and DNA repair factor IIH subunit TFB1 General transcription and DNA repair factor IIH subunit TFB2 General transcription and DNA repair factor IIH subunit TFB4 General transcription and DNA repair factor IIH subunit TFB5 Nuclear cap-binding protein complex subunit 1 Nuclear cap-binding protein subunit 2 RNA polymerase II transcription factor B subunit 3 Serine/threonine-protein kinase KIN28 Transcription elongation factor SPT5 Transcription initiation factor IIF subunit alpha Transcription initiation factor IIF subunit beta mRNA cap guanine-N7 methyltransferase mRNA-capping enzyme subunit alpha	P04050 P06242 P06839 P08518 P16370 P20433 P20434 P20435 P20436 P22139 P27692 P27999 P32776 P32783 P34087 P34160 P37366 P38902 P40422 P41895 P41896 Q00578 Q01159 Q02939 Q03290 Q04673 Q08920 Q12004 Q3E7C1	ABD1 CBC1 CBC2 CBP20 CBP80 CCL1 CEG1 GCR3 KIN28 LOM3 MUD13 RAD25 RAD3 REM1 RIG2 RPA7 RPB1 RPB10 RPB11 RPB12 RPB150 RPB2 RPB220 RPB3 RPB4 RPB5 RPB6 RPB7 RPB8 RPB9 RPC10 RPC9 RPO21 RPO22 RPO26 SAE1 SPT5 SSL1 SSL2 SSU71 STO1 SUA8 SUT1 TFB1 TFB2 TFB3 TFB4 TFB5 TFG1 TFG2 UVS112	Saccharomyces cerevisiae (brewer's yeast)
SUMOylation of chromatin organization proteins	E3 SUMO-protein ligase SIZ1 Histone H4 Histone deacetylase HDA1 Histone deacetylase RPD3 Nucleoporin ASM4 Nucleoporin NDC1 Nucleoporin NIC96 Nucleoporin NSP1 Nucleoporin NUP116/NSP116 Nucleoporin NUP120 Nucleoporin NUP133 Nucleoporin NUP170 Nucleoporin NUP188 Nucleoporin NUP192 Nucleoporin NUP1 Nucleoporin NUP2 Nucleoporin NUP42 Nucleoporin NUP57 Nucleoporin NUP82 Nucleoporin NUP84 Nucleoporin NUP85 Nucleoporin SEH1 Protein MLP1 Protein transport protein SEC13 Ran-specific GTPase-activating protein 1 Ran-specific GTPase-activating protein 2 SUMO-conjugating enzyme UBC9 SWI/SNF global transcription activator complex subunit SWP82 Ubiquitin-like protein SMT3 mRNA export factor GLE2	P02309 P14907 P20676 P32499 P32500 P32561 P34077 P35729 P36161 P38181 P40066 P40368 P40517 P41920 P43554 P46673 P47054 P48837 P49686 P50623 P52593 P52891 P53011 P53973 Q02455 Q02630 Q04195 Q04491 Q05166 Q12306	ANU3 ASM4 CST20 GLE2 HDA1 HHF1 HHF2 HTN1 MLP1 MOF6 NDC1 NIC96 NLE3 NSP1 NSP116 NUP1 NUP116 NUP120 NUP133 NUP170 NUP188 NUP192 NUP2 NUP42 NUP57 NUP59 NUP82 NUP84 NUP85 RAE1 RAT2 RAT3 RAT9 REC3 RIP1 RPD3 SDI2 SDS6 SEC13 SEH1 SFO1 SIZ1 SMT3 SWP82 UBC9 UIP1 ULL1 YRB1 YRB2	Saccharomyces cerevisiae (brewer's yeast)
Calnexin/calreticulin cycle	Calnexin homolog Protein disulfide-isomerase	P17967 P27825	CNE1 MFP1 PDI1 TRG1	Saccharomyces cerevisiae (brewer's yeast)
COPI-dependent Golgi-to-ER retrograde traffic	ADP-ribosylation factor 1 ADP-ribosylation factor 2 ADP-ribosylation factor GTPase-activating protein GCS1 ADP-ribosylation factor GTPase-activating protein GLO3 ARF guanine-nucleotide exchange factor 2 Alpha-soluble NSF attachment protein Coatomer subunit alpha Coatomer subunit beta' Coatomer subunit beta Coatomer subunit delta Coatomer subunit epsilon Coatomer subunit gamma Coatomer subunit zeta ER lumen protein-retaining receptor ER-derived vesicles protein ERV29 Endoplasmic reticulum vesicle protein 25 Endosomal protein P24B GTP-binding protein YPT11 GTP-binding protein YPT1 Protein ERP1 Protein ERP2 Protein ERP3 Protein ERP4 Protein ERP5 Protein ERP6 Protein transport protein DSL1 Protein transport protein SEC20 Protein transport protein SEC22 Protein transport protein TIP20 Protein transport protein USE1 Sporulation protein SPS18 Syntaxin UFE1 Vesicular-fusion protein SEC18	P01123 P11076 P18414 P18759 P19146 P22214 P28791 P32074 P32572 P32602 P32803 P33891 P35197 P38682 P38819 P39704 P39993 P40509 P41810 P41811 P41834 P43621 P48559 P53146 P53198 P53337 P53600 P53622 P53847 P54837 Q05359 Q12403 Q12450	ARF1 ARF2 COP1 DSL1 EMP24 ERD2 ERP1 ERP2 ERP3 ERP4 ERP5 ERP6 ERV25 ERV29 GCS1 GEA2 GLO3 RET1 RET2 RET3 SEC17 SEC18 SEC20 SEC21 SEC22 SEC26 SEC27 SEC28 SEC33 SLT1 SLY2 SOO1 SPS18 SPX18 TIP1 TIP20 TSL26 UFE1 USE1 YP2 YPT1 YPT11	Saccharomyces cerevisiae (brewer's yeast)
Synthesis of very long-chain fatty acyl-CoAs	Fatty acid elongase 1 Fatty acid elongase 2 Fatty acid elongase 3 Long-chain-fatty-acid--CoA ligase 1 Long-chain-fatty-acid--CoA ligase 2 Long-chain-fatty-acid--CoA ligase 3 Long-chain-fatty-acid--CoA ligase 4 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PHS1 Very-long-chain enoyl-CoA reductase	P25358 P30624 P39002 P39518 P39540 P40319 P40857 P47912 Q99190	APA1 ELO1 ELO2 ELO3 FAA1 FAA2 FAA3 FAA4 FAM1 FEN1 GNS1 PHS1 SRE1 SUR4 TSC13 VBM1 VBM2	Saccharomyces cerevisiae (brewer's yeast)

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