GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 1 - 25 of 128 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
Atorvastatin ADME
  • DDB_G0268184
  • abcB2
  • abcB3
  • abcB6
  • abcB7
  • abcC10
  • abcC12
  • abcC3
  • abcC5
  • abcC8
  • tagA
  • tagB
  • tagC
  • tagD
  • ugt2
  • ugt3
Dictyostelium discoideum
Mitochondrial ABC transporters
  • abcB2
  • abcB3
  • abcB5
  • abcB6
  • abcB7
  • tagA
  • tagB
  • tagC
  • tagD
Dictyostelium discoideum
Peroxisomal protein import
  • DDB_G0268018
  • DDB_G0274339
  • DDB_G0275415
  • DDB_G0277335
  • DDB_G0277477
  • DDB_G0279049
  • DDB_G0280851
  • DDB_G0282495
  • DDB_G0287851
  • DDB_G0290089
  • DDB_G0290277
  • DDB_G0290547
  • acox1
  • agxt
  • cat
  • catA
  • ddo-1
  • ddo-2
  • ech1
  • hacl1
  • haox
  • hmgL
  • idhM
  • mfe2
  • mfeB
  • pex10
  • pex12
  • pex13
  • pex14
  • pex5
  • pex7
  • redB
  • ubcB
  • ubqB
  • ubqC
  • ubqF
  • ubqG
  • ubqH
  • ubqI
  • ubqJ
  • ubqO
  • veg116
Dictyostelium discoideum
Iron uptake and transport
  • abcG12
  • abcG22
  • abcG24
  • abcG4
  • abcG7
  • abcG8
  • acnA
  • aco1
  • cand1
  • cul2
  • culB
  • fp21A
  • fp21B
  • fpa1
  • fpa1A
  • fpa1B
  • fpa2
  • fpaA
  • fpaB-1
  • fpaB-2
  • nedd8
  • nramp
  • nramp1
  • skp1A
  • skp1B
  • slc11a1
  • ubqB
  • ubqC
  • ubqF
  • ubqG
  • ubqH
  • ubqI
  • ubqJ
  • ubqO
  • veg116
Dictyostelium discoideum
Rhesus glycoproteins mediate ammonium transport.
  • rhgA
  • rhgB
Dictyostelium discoideum
Regulation of necroptotic cell death
  • 7tmk1
  • DDB_G0267514
  • DDB_G0272254
  • DDB_G0275145
  • DDB_G0278075
  • DDB_G0278981
  • DDB_G0288147
  • DDB_G0288683
  • DDB_G0289043
  • DpyK1
  • DpyK2
  • DpyK4
  • drkA
  • drkB
  • drkC
  • pyK1
  • pyk2
  • pyk4
  • pykA
  • pykB
  • qkgA-1
  • qkgA-2
  • rbrA
  • rk1
  • rk2
  • rk3
  • roco11
  • roco2-1
  • roco2-2
  • roco4
  • roco5
  • roco7
  • roco8
  • splA
  • splB
  • ubqB
  • ubqC
  • ubqF
  • ubqG
  • ubqH
  • ubqI
  • ubqJ
  • ubqO
  • veg116
  • vsk1
  • zak1
  • zak2
  • zakA
Dictyostelium discoideum
ECM proteoglycans
  • sadA
Dictyostelium discoideum
Transport of bile salts and organic acids, metal ions and amine compounds
  • DDB_G0277263
  • DDB_G0278161
  • DDB_G0288717
  • DDB_G0292132
  • ctl2
  • slc44a2
Dictyostelium discoideum
Prednisone ADME
  • DDB_G0268184
  • DDB_G0268562
  • abcB2
  • abcB3
  • abcB6
  • abcB7
  • alrA
  • alrB
  • alrC
  • tagA
  • tagB
  • tagC
  • tagD
  • ugt2
  • ugt3
Dictyostelium discoideum
Glyoxylate metabolism and glycine degradation
  • aatA
  • agxt
  • ddo-1
  • ddo-2
  • haox
  • prodh
Dictyostelium discoideum
Lewis blood group biosynthesis
  • DDB_G0270208
  • fut1
  • fut10
  • fut11
  • fut2
  • fut3
  • fut4
  • fut5
  • fut6
  • fut7
  • fut9
Dictyostelium discoideum
RAF/MAP kinase cascade
  • erk1
  • erkA
Dictyostelium discoideum
KEAP1-NFE2L2 pathway
  • DDB_G0270098
  • DDB_G0271372
  • DDB_G0272951
  • DDB_G0279427
  • DDB_G0290491
  • M4
  • apg8
  • atg8
  • cdcD
  • cul3
  • culC
  • dapA
  • dpr1
  • npl4
  • nploc4
  • prdD
  • prdE
  • prtC
  • prtD
  • psmA1
  • psmA2
  • psmA3
  • psmA4
  • psmA5
  • psmA6
  • psmA7
  • psmB2
  • psmB3
  • psmB4-1
  • psmB4-2
  • psmB5
  • psmB6
  • psmB7
  • psmC1
  • psmC2
  • psmC3
  • psmC4
  • psmC6
  • psmD1
  • psmD10
  • psmD11
  • psmD12
  • psmD13
  • psmD14
  • psmD2
  • psmD3
  • psmD4
  • psmD6
  • psmD7
  • psmD8-1
  • psmD8-2
  • psmD9
  • psmE3
  • psmE4
  • psmF1
  • rbx1
  • sks1
  • tbp2
  • tbpB
  • ubqB
  • ubqC
  • ubqF
  • ubqG
  • ubqH
  • ubqI
  • ubqJ
  • ubqO
  • ubxd7
  • ufd1
  • veg116
Dictyostelium discoideum
Macroautophagy
  • DDB_G0269162
  • DDB_G0269272
  • DDB_G0269448
  • DDB_G0271610
  • DDB_G0274833
  • DDB_G0278311
  • DDB_G0281845
  • DDB_G0283567
  • DDB_G0283753
  • DDB_G0284481
  • DDB_G0288175
  • DDB_G0288287
  • DDB_G0288731
  • DDB_G0289807
  • DDB_G0290005
  • DDB_G0290491
  • DDB_G0291948
  • DDB_G0292160
  • DDB_G0293258
  • ampka
  • apg1
  • apg12
  • apg3
  • apg4-1
  • apg4-2
  • apg5
  • apg6B
  • apg7
  • apg8
  • apg9
  • atg1
  • atg12
  • atg18
  • atg3
  • atg4-1
  • atg4-2
  • atg5
  • atg6B
  • atg7
  • atg8
  • atg9
  • chmp2a2
  • chmp3
  • chmp4
  • chmp6
  • chmp7
  • lst8
  • mapbpip
  • mrkB
  • pats1
  • pik3r4
  • pik5
  • pikE
  • prkaa
  • prkab
  • prkag
  • ragA
  • ragC
  • raptor
  • rheb
  • snf7
  • snfA
  • tipD
  • tor
  • vps15
  • vps20
  • vps24
  • vps2B
  • vps32
  • wdr45l
  • wipi2
Dictyostelium discoideum
GDP-fucose biosynthesis
  • DDB_G0269678
  • fpgt
  • fuct1
  • ger
  • gmd
  • slc35c1
Dictyostelium discoideum
TP53 Regulates Metabolic Genes
  • DDB_G0274833
  • DDB_G0279427
  • DDB_G0280527
  • DDB_G0283567
  • DDB_G0288795
  • DDB_G0291948
  • DDB_G0292160
  • akt
  • ampka
  • dagA
  • fttB
  • g6pd-1
  • g6pd-2
  • g6pi
  • gpi
  • gsr
  • lst8
  • mapbpip
  • mrkB
  • pgi
  • pkbA
  • prdx4
  • prdx5
  • prkaa
  • prkab
  • prkag
  • ragA
  • ragC
  • raptor
  • rheb
  • snfA
  • tor
  • trx3
  • trx4
  • trxC
  • trxD
  • zwf
Dictyostelium discoideum
Role of phospholipids in phagocytosis
  • DDB_G0271516
  • DDB_G0275547
  • DDB_G0284155
  • DDB_G0284367
  • DDB_G0288795
  • akt
  • dagA
  • pkbA
  • pld1
  • pld3
  • pldA
  • pldB
  • pldC
  • pldY
  • pldZ
Dictyostelium discoideum
Synthesis of glycosylphosphatidylinositol (GPI)
  • DDB_G0276251
  • DDB_G0280891
  • pigB
  • pigF
  • pigN
  • pigX
  • pigl
  • pigm
  • pigw
  • smp3
Dictyostelium discoideum
Aspirin ADME
  • D2
  • DDB_G0268184
  • DDB_G0276969
  • DDB_G0279717
  • DDB_G0285555
  • DDB_G0291344
  • abcC10
  • abcC12
  • abcC3
  • abcC5
  • abcC8
  • cryS
  • cyp508A1-1
  • cyp508A1-2
  • cyp508A2-1
  • cyp508A2-2
  • cyp508A3-1
  • cyp508A3-2
  • cyp508A4
  • cyp508B1
  • cyp508C1
  • cyp508D1
  • cyp515A1
  • cyp515B1
  • cyp516A1
  • cyp516B1
  • cyp517A1
  • cyp517A2
  • cyp517A4
  • cyp518A1
  • cyp518B1
  • cyp519B1
  • cyp519D1
  • cyp519E1
  • cyp521A1
  • cyp522A1
  • cyp554A1
  • cyp555A1
  • ostA
  • ostB
  • ugt2
  • ugt3
Dictyostelium discoideum
N-glycan trimming in the ER and Calnexin/Calreticulin cycle
  • DDB_G0268520
  • ubqB
  • ubqC
  • ubqF
  • ubqG
  • ubqH
  • ubqI
  • ubqJ
  • ubqO
  • veg116
Dictyostelium discoideum
Cargo concentration in the ER
  • DDB_G0268452
  • DDB_G0269942
  • DDB_G0271968
  • ctsZ
  • gmsA
  • sarA
  • sec23
  • sec24
  • sec24l
  • syn5
Dictyostelium discoideum
Glucagon-like Peptide-1 (GLP1) regulates insulin secretion
  • gefP
  • gefW
  • iplA
  • rap1
  • rapA
  • rasGEFP
  • rasGEFW
Dictyostelium discoideum
Erythrocytes take up carbon dioxide and release oxygen
  • DDB_G0290691
  • aqpA
  • rhgB
  • wacA
Dictyostelium discoideum
Acyl chain remodelling of PI
  • DDB_G0278541
  • plbD
Dictyostelium discoideum
PLC beta mediated events
  • Ga3
  • gbqA
  • gpa10
  • gpa11
  • gpa12
  • gpaA
  • gpaB
  • gpaC
  • gpaD
  • gpaE
  • gpaF
  • gpaG
  • gpaH
  • gpaJ
  • gpaK
  • gpaL
  • pipA
  • plc
Dictyostelium discoideum

About Release Notes Help Feedback

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International


GlyCosmos Portal v4.0.0

Last updated: August 19, 2024