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protocadherin 12

Summary

Gene Symbol

Pcdh12

Organism

Mus musculus (house mouse)

External Links

NCBI Gene

53601

PubChem

53601

Alliance of Genome Resources

MGI:1855700

Annotation

Keyword

Calcium
Cell adhesion
Cell junction
Cell membrane
Glycoprotein
Phosphoprotein
Reference proteome
Repeat
Secreted
Signal
Transmembrane helix

Proteins

Displaying **all 2** entries
UniProt	Protein Name
O55134	Vascular cadherin-2 Vascular endothelial cadherin-2
Q8C883

Annotation information from UniProt.

Gene Ontology (GO)

Displaying **all 5** entries
GO Term	Evidence Code	PMID
glycogen metabolic process	IMP	18477666
cell adhesion	IBA
homophilic cell adhesion via plasma membrane adhesion molecules	IDA	9651350
calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules	IDA	9651350
labyrinthine layer development	IMP	18477666

GO Hierarchy

biological process

metabolic process [inference]

cellular metabolic process [inference]

generation of precursor metabolites and energy [inference]

energy derivation by oxidation of organic compounds [inference]

energy reserve metabolic process [inference]

glycogen metabolic process

primary metabolic process [inference]

carbohydrate metabolic process [inference]

polysaccharide metabolic process [inference]

glucan metabolic process [inference]

glycogen metabolic process

organic substance metabolic process [inference]

carbohydrate metabolic process [inference]

polysaccharide metabolic process [inference]

glucan metabolic process [inference]

glycogen metabolic process

macromolecule metabolic process [inference]

polysaccharide metabolic process [inference]

glucan metabolic process [inference]

glycogen metabolic process

cellular process [inference]

cell adhesion

cell-cell adhesion [inference]

cell-cell adhesion via plasma-membrane adhesion molecules [inference]

cellular metabolic process [inference]

generation of precursor metabolites and energy [inference]

energy derivation by oxidation of organic compounds [inference]

energy reserve metabolic process [inference]

glycogen metabolic process

developmental process [inference]

anatomical structure development [inference]

labyrinthine layer development

Displaying **all 4** entries
GO Term	Evidence Code	PMID
extracellular region	IEA
plasma membrane	ISS	9651350
plasma membrane	IBA
cell-cell junction	IDA	16269175 9651350

GO Hierarchy

cellular component

cellular anatomical entity [inference]

extracellular region

membrane [inference]

plasma membrane

cell junction [inference]

anchoring junction [inference]

cell-cell junction

Displaying 1 entry
GO Term	Evidence Code	PMID
calcium ion binding	IEA

GO Hierarchy

molecular function

binding [inference]

ion binding [inference]

cation binding [inference]

metal ion binding [inference]

calcium ion binding

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

protocadherin-12

Functional Category

M: Cell wall/membrane/envelope biogenesis
O: Posttranslational modification, protein turnover, chaperones
Q: Secondary metabolites biosynthesis, transport and catabolism

Displaying **all 2** entries
Gene Ontology
calcium ion binding
homophilic cell adhesion via plasma membrane adhesion molecules

Displaying **all 4** entries
InterPro
Cadherin conserved site
Cadherin, N-terminal
Cadherin-like superfamily
Cadherin-like

Ortholog

Displaying entries **1 - 10** of **123** in total

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Species	Gene ID	Alliance of Genome Resources	Orthologous MAtrix
Caenorhabditis elegans	12936	WB:WBGene00000402
Caenorhabditis elegans	12939	WB:WBGene00000402
Caenorhabditis elegans	12943	WB:WBGene00000402
Caenorhabditis elegans	18530	WB:WBGene00000402
Homo sapiens	51294	ZFIN:ZDB-GENE-140106-126	HUMAN81426
Danio rerio	53601	ZFIN:ZDB-GENE-140106-126
Caenorhabditis elegans	73173	WB:WBGene00000402
Caenorhabditis elegans	93699	WB:WBGene00000402
Caenorhabditis elegans	93700	WB:WBGene00000402
Caenorhabditis elegans	93701	WB:WBGene00000402