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Repository for lectin-assisted multimodality data

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Guidelines

MIRAGE

Sil1p

Summary

Gene Symbol

SIL1

Organism

Saccharomyces cerevisiae S288C

External Links

NCBI Gene

854126

PubChem

854126

Alliance of Genome Resources

SGD:S000005391

Annotation

Keyword

3D-structure
Endoplasmic reticulum
Glycoprotein
Reference proteome
Signal
Translocation

Proteins

Displaying 1 entry
UniProt	Protein Name
Q08199	Protein SLS1

Annotation information from UniProt.

Gene Ontology (GO)

Displaying **all 2** entries
GO Term	Evidence Code	PMID
SRP-dependent cotranslational protein targeting to membrane, translocation	IMP	10958688
protein transport	IEA

GO Hierarchy

biological process

cellular process [inference]

cellular localization [inference]

intracellular transport [inference]

intracellular protein transport [inference]

intracellular protein transmembrane transport [inference]

SRP-dependent cotranslational protein targeting to membrane, translocation

cellular macromolecule localization [inference]

protein localization [inference]

establishment of protein localization [inference]

protein transport

intracellular protein transport [inference]

intracellular protein transmembrane transport [inference]

SRP-dependent cotranslational protein targeting to membrane, translocation

protein transmembrane transport [inference]

intracellular protein transmembrane transport [inference]

SRP-dependent cotranslational protein targeting to membrane, translocation

transmembrane transport [inference]

protein transmembrane transport [inference]

intracellular protein transmembrane transport [inference]

SRP-dependent cotranslational protein targeting to membrane, translocation

localization [inference]

macromolecule localization [inference]

cellular macromolecule localization [inference]

protein localization [inference]

establishment of protein localization [inference]

protein transport

intracellular protein transport [inference]

intracellular protein transmembrane transport [inference]

SRP-dependent cotranslational protein targeting to membrane, translocation

protein transmembrane transport [inference]

intracellular protein transmembrane transport [inference]

SRP-dependent cotranslational protein targeting to membrane, translocation

establishment of localization [inference]

transport [inference]

intracellular transport [inference]

intracellular protein transport [inference]

intracellular protein transmembrane transport [inference]

SRP-dependent cotranslational protein targeting to membrane, translocation

transmembrane transport [inference]

protein transmembrane transport [inference]

intracellular protein transmembrane transport [inference]

SRP-dependent cotranslational protein targeting to membrane, translocation

organic substance transport [inference]

protein transport

intracellular protein transport [inference]

intracellular protein transmembrane transport [inference]

SRP-dependent cotranslational protein targeting to membrane, translocation

protein transmembrane transport [inference]

intracellular protein transmembrane transport [inference]

SRP-dependent cotranslational protein targeting to membrane, translocation

nitrogen compound transport [inference]

protein transport

intracellular protein transport [inference]

intracellular protein transmembrane transport [inference]

SRP-dependent cotranslational protein targeting to membrane, translocation

protein transmembrane transport [inference]

intracellular protein transmembrane transport [inference]

SRP-dependent cotranslational protein targeting to membrane, translocation

establishment of protein localization [inference]

protein transport

intracellular protein transport [inference]

intracellular protein transmembrane transport [inference]

SRP-dependent cotranslational protein targeting to membrane, translocation

protein transmembrane transport [inference]

intracellular protein transmembrane transport [inference]

SRP-dependent cotranslational protein targeting to membrane, translocation

establishment of localization in cell [inference]

intracellular transport [inference]

intracellular protein transport [inference]

intracellular protein transmembrane transport [inference]

SRP-dependent cotranslational protein targeting to membrane, translocation

cellular localization [inference]

intracellular transport [inference]

intracellular protein transport [inference]

intracellular protein transmembrane transport [inference]

SRP-dependent cotranslational protein targeting to membrane, translocation

cellular macromolecule localization [inference]

protein localization [inference]

establishment of protein localization [inference]

protein transport

intracellular protein transport [inference]

intracellular protein transmembrane transport [inference]

SRP-dependent cotranslational protein targeting to membrane, translocation

protein transmembrane transport [inference]

intracellular protein transmembrane transport [inference]

SRP-dependent cotranslational protein targeting to membrane, translocation

Displaying **all 4** entries
GO Term	Evidence Code	PMID
endoplasmic reticulum	IBA
endoplasmic reticulum	IEA
endoplasmic reticulum	HDA	26928762
endoplasmic reticulum lumen	IEA

GO Hierarchy

cellular component

cellular anatomical entity [inference]

membrane-enclosed lumen [inference]

organelle lumen [inference]

intracellular organelle lumen [inference]

endoplasmic reticulum lumen

organelle [inference]

membrane-bounded organelle [inference]

intracellular membrane-bounded organelle [inference]

endoplasmic reticulum

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

endoplasmic reticulum

Displaying **all 3** entries
GO Term	Evidence Code	PMID
adenyl-nucleotide exchange factor activity	IDA	10958688
adenyl-nucleotide exchange factor activity	IBA
adenyl-nucleotide exchange factor activity	IEA

GO Hierarchy

molecular function

binding [inference]

small molecule binding [inference]

heterocyclic compound binding [inference]

nucleotide binding [inference]

purine nucleotide binding [inference]

adenyl nucleotide binding [inference]

adenyl-nucleotide exchange factor activity

organic cyclic compound binding [inference]

nucleoside phosphate binding [inference]

nucleotide binding [inference]

purine nucleotide binding [inference]

adenyl nucleotide binding [inference]

adenyl-nucleotide exchange factor activity

molecular function regulator activity [inference]

ATPase regulator activity [inference]

adenyl-nucleotide exchange factor activity

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

Nucleotide exchange factor

Functional Category

E: Amino acid transport and metabolism
M: Cell wall/membrane/envelope biogenesis
T: Signal transduction mechanisms

Displaying 1 entry
Gene Ontology
adenyl-nucleotide exchange factor activity

Displaying **all 2** entries
InterPro
Armadillo-like helical
Armadillo-type fold

Alliance of Genome Resources

Expression

Displaying 1 entry
Location	References
endoplasmic reticulum	PMID:26928762

Disease

Disease Ontology

Displaying 1 entry
DO ID	Disease Name	Source
DOID:0080195	Marinesco-Sjogren syndrome	Alliance of Genome Resources

Ortholog

Displaying **all 6** entries
Species	Gene ID	Alliance of Genome Resources	Orthologous MAtrix
Xenopus tropicalis	43034	Xenbase:XB-GENE-5898521
Xenopus tropicalis	64374	Xenbase:XB-GENE-5898521
Xenopus tropicalis	81500	Xenbase:XB-GENE-5898521
Xenopus tropicalis	291673	Xenbase:XB-GENE-5898521
Xenopus tropicalis	414657	Xenbase:XB-GENE-5898521
Xenopus tropicalis	854126	Xenbase:XB-GENE-5898521

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Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

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GlyCosmos Portal v4.2.1

Last updated: April 7, 2025