GlyCosmos Portal

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Organisms	Evidence
Homo sapiens (human)	GlycoEpitope
Asteroidea (starfishes)	GlyTouCan(glycome-db)
Klebsiella sp.	GlyTouCan(bcsdb)
Leishmania amazonensis	GlyTouCan(bcsdb)
Shigella flexneri	GlyTouCan(bcsdb)

Taxonomic Hierarchy

root

cellular organisms [inference]

Bacteria (eubacteria) [inference]

Pseudomonadota [inference]

Gammaproteobacteria [inference]

Enterobacterales [inference]

Enterobacteriaceae [inference]

Klebsiella/Raoultella group [inference]

Klebsiella [inference]

unclassified Klebsiella [inference]

Klebsiella sp.

Shigella [inference]

Shigella flexneri

Salmonella

Eukaryota (eucaryotes) [inference]

Opisthokonta [inference]

Metazoa (metazoans) [inference]

Eumetazoa [inference]

Bilateria [inference]

Deuterostomia [inference]

Echinodermata (echinoderms) [inference]

Eleutherozoa [inference]

Asterozoa [inference]

Asteroidea (starfishes)

Chordata (chordates) [inference]

Craniata [inference]

Vertebrata (vertebrates) [inference]

Gnathostomata (jawed vertebrates) [inference]

Teleostomi [inference]

Euteleostomi (bony vertebrates) [inference]

Sarcopterygii [inference]

Dipnotetrapodomorpha [inference]

Tetrapoda (tetrapods) [inference]

Amniota (amniotes) [inference]

Mammalia (mammals) [inference]

Theria [inference]

Eutheria (placentals) [inference]

Boreoeutheria [inference]

Euarchontoglires [inference]

Primates [inference]

Haplorrhini [inference]

Simiiformes [inference]

Catarrhini [inference]

Hominoidea (apes) [inference]

Hominidae (great apes) [inference]

Homininae [inference]

Homo [inference]

Homo sapiens (human)

Discoba [inference]

Euglenozoa [inference]

Kinetoplastea (kinetoplasts) [inference]

Metakinetoplastina [inference]

Trypanosomatida [inference]

Trypanosomatidae [inference]

Leishmaniinae [inference]

Leishmania [inference]

Leishmania mexicana species complex [inference]

Leishmania amazonensis

GlycoGene Database (GGDB)

Displaying entries **6 - 7** of 7 in total

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Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Product	Reducing terminal(Product)	Reference
B4GALNT1	UDP-GalNAc	G84224TW	Cer	G90562PB	Cer	1601877
B3GNT5	UDP-GlcNAc	G84224TW	Cer	G06239NA	Cer	11283017

Displaying entries **6 - 10** of 21 in total

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Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Product	Reducing terminal(Product)	Reference
FUT5	GDP-Fuc	G84224TW	R	G57548NB	R	8780523
A4GALT	UDP-Gal	G84224TW	Cer	G00059MO	Cer	10747952
B4GALT6	UDP-Gal	G71142DF		G84224TW		10580128
B3GALT2	UDP-Gal	G84224TW	nitrophenyl	G45796AX	nitrophenyl	9417100
B4GALT3	UDP-Gal	G71142DF	[beta]1-Cer	G84224TW	[beta]1-Cer	9405390

Displaying entries **1 - 5** of 20 in total

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Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Reference
ST8SIA3	CMP-Neu5Ac	G84224TW	Cer	7782326
ST3GAL1	CMP-Neu5Ac	G84224TW	free	8288606
ST6GAL1	CMP-Neu5Ac	G84224TW	ceramide	12235148
ST3GAL6	CMP-Neu5Ac	G84224TW	ceramide	10206952
ST8SIA6	CMP-Neu5Ac	G84224TW		11980897

KEGG BRITE Database

KEGG ID

G00092

Enzyme

References

Reactions

Displaying **all 7** entries
KEGG Reaction	Enzyme	Acceptor	Product
R05937	2.4.3.9	G84224TW	G91237TK
R05960	2.4.1.228	G84224TW	G00059MO
R06276	2.4.1.274	G71142DF	G84224TW
R05961	3.2.1.22	G00059MO	G84224TW
R05971	2.4.1.206	G84224TW	G06239NA
R11320	2.4.1.87	G84224TW	G78074HX
R05938	2.4.1.92	G84224TW	G90562PB

GlycoEpitope

Epitope ID: EP0078
Epitope Name: Lactosylceramide

Sequence Descriptors

GlycoCT

RES
1b:b-dglc-HEX-1:5
2b:b-dgal-HEX-1:5
LIN
1:1o(4+1)2d

WURCS

WURCS=2.0/2,2,1/[a2122h-1b_1-5][a2112h-1b_1-5]/1-2/a4-b1

Literature (from GlyTouCan)

BCSDB

Roslund MU et al. Complete (1)H and (13)C NMR chemical shift assignments of mono-, di-, and trisaccharides as basis for NMR chemical shift predictions of polysaccharides using the computer program casper. Carbohydr Res. 2011 Aug 16;346:(11):1311-9. doi: 10.1016/j.carres.2011.04.033. PMID: 21621752.

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

All Resources

Other Information

Tools

Search Tools

Summary

External Links

3D Structures

KEGG BRITE Database

GlycoEpitope

Sequence Descriptors

Literature (from GlyTouCan)

International Collaboration

Acknowledgements