Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Source Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB) June 1, 2016
Displaying entries 1 - 25 of 1840 in total
Species Pathogen Adherence Molecule Ligand Name Ligand Feature Target Source Glycan Sequence ▲ Binding PubMed ID
Influenza virus Unknown GM3(Neu4Ac5Gc) Monosialoglycosphingolipids Ac(-4)Neu5Gc(a2-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 7870741
Influenza virus Unknown GM3(Neu4Ac5Gc) Monosialoglycosphingolipids Ac(-4)Neu5Gc(a2-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 1740131
Influenza virus Unknown GD3(Neu5Ac9Ac) Disialoglycosphingolipids Ac(-9)NeuAc(a2-8)NeuAc(a2-3)Gal(b1-4)Glc(b1-1)Cer Not Binding 7870741
Influenza virus Unknown GD3(Neu5Ac9Ac) Disialoglycosphingolipids Ac(-9)NeuAc(a2-8)NeuAc(a2-3)Gal(b1-4)Glc(b1-1)Cer Binding 7870741
Escherichia coli F1C Ceramide Non-glycosylated Lipids Cer Not Binding 10816509
Clostridium botulinum Botulinum neurotoxin (16S) Fucose Monosaccharides Intestinal epithelial cells (T84) Fuc Not Binding 17156748
Clostridium botulinum HA Fucose Monosaccharides Intestinal epithelial cells (T84) Fuc Not Binding 17156748
Ralstonia solanacearum RS-IIL (homologous to PA-IIL) Fucose Monosaccharides Fuc Binding 16762477
Pseudomonas aeruginosa PA-IIL Fucosylamine Monosaccharides Fuc Binding 10967261
Pseudomonas aeruginosa PA-IIL L-Fucose Monosaccharides Fuc Binding 10967261
Pseudomonas aeruginosa PA-IIL (47-kDa) L-Fucose Monosaccharides Fuc Binding 15049333
Vibrio cholerae Unknown L-Fucose Monosaccharides Fuc Binding 2885220
Helicobacter pylori Unknown Fucose Monosaccharides Fuc Binding 8574698
Helicobacter pylori Unknown Fucose Monosaccharides Fuc Binding 16088272
Enterococcus faecalis EfaA (Lary family) L-Fucose-containing residues Saccharides Fuc Binding 12640357
Pseudomonas aeruginosa Unknown Fucose Monosaccharides Respiratory tract Fuc Binding 16564136
Norovirus Unknown Blood group H antigen Disaccharides Saliva Fuc(a1-2)Gal Binding 18701592
Pseudomonas aeruginosa PA-IIL Blood group H antigen Disaccharides Fuc(a1-2)Gal Binding 16762477
Ralstonia solanacearum RSL (30-kDa proteins) Blood group H antigen Disaccharides Fuc(a1-2)Gal Binding 16762477
Norovirus Unknown Blood group H antigen Disaccharides Saliva Fuc(a1-2)Gal Not Binding 18701592
Norovirus Unknown Blood group H antigen Disaccharides Fuc(a1-2)Gal Binding 18599458
Shigella dysenteriae Shiga toxin unnamed ligand Glycosphingolipids Fuc(a1-2)Gal(b1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Not Binding 2435422
Actinomyces viscosus Unknown unnamed ligand Glycosphingolipids Human meconium Fuc(a1-2)Gal(b1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Not Binding 2358461
Shigella dysenteriae B subunit unnamed ligand Glycosphingolipids Human meconium Fuc(a1-2)Gal(b1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Not Binding 3543013
Escherichia coli Unknown unnamed ligand Glycosphingolipids Fuc(a1-2)Gal(b1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Binding 2435422

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