Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Source Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB) June 1, 2016
Displaying entries 1 - 25 of 1840 in total
Species Pathogen Adherence Molecule ▲ Ligand Name Ligand Feature Target Source Glycan Sequence Binding PubMed ID
Borrelia burgdorferi "DbpA, DbpB, Bgp" Dermatan sulfate Glycosaminoglycans Binding 16299269
Borrelia burgdorferi "DbpA, DbpB, Bgp" Collagen (type I) Glycoproteins Binding 16299269
Borrelia burgdorferi "DbpA, DbpB, Bgp" Heparin Glycosaminoglycans Binding 16299269
Borrelia burgdorferi "DbpA, DbpB, Bgp" Decorin Proteoglycans Binding 16299269
Candida albicans "Extracellular polymeric material, acid proteinase, chitin" Asialo-GM2 (Gangliotriosylceramide; GgO3) Oligoglycosylceramides Human buccal epihelial cells (BECs) GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer Binding 8005674
Candida albicans "Extracellular polymeric material, acid proteinase, chitin" Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1) Oligoglycosylceramides Human buccal epihelial cells (BECs) Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer Binding 8005674
Sendai virus "HN (hemagglutinin neuraminidase), F (fusion protein)" Sialic acid Monosaccharides Binding 8574698
Anaplasma marginale "MSP1a, MSP1b, MSP2" unknown carbohydrate ligand Saccharides Binding 16299269
Borrelia burgdorferi "OspA, OspB, OspC" Gangliosides Sialoglycosphingolipids Binding 16299269
Borrelia burgdorferi "OspA, OspB, OspC" Lactosylceramide (Lactocerebroside) Diosylceramides Gal(b1-4)Glc(b1-1)Cer Binding 16299269
Borrelia burgdorferi "OspA, OspB, OspC" Galactosylceramide (Galactocerebroside) Monoglycosylceramides Gal(b1-1)Cer Binding 16299269
Anaplasma phagocytophilum "P-selectin mimic, MSP2" Fucosylated PSGL-1 (P-selectin glycoprotein ligand-1) Glycoproteins Binding 16299269
Escherichia coli (class I) Gb3 (Globotriaosylceramide; Trihexosylceramide; Pk antigen (GSL); CTH) Oligoglycosylceramides Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Binding 11953368
Escherichia coli (class I/II) Gb4 (Globoside; Globotetraose; P antigen) Oligoglycosylceramides GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Binding 7721812
Escherichia coli (class I/II) Gb3 (Globotriaosylceramide; Trihexosylceramide; Pk antigen (GSL); CTH) Oligoglycosylceramides Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Binding 7721812
Escherichia coli (class I/II) GL-III glycolipid Glycolipids Binding 7721812
Escherichia coli (class I/II) GL-IV glycolipid Glycolipids Binding 7721812
Escherichia coli (class I/II/III) Gb5 (Forssman glycolipid) Oligoglycosylceramides GalNAc(a1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Binding 7721812
Escherichia coli (class I/II/III) Globo-A Oligoglycosylceramides Binding 7721812
Escherichia coli (class I/III) GL-II glycolipid Glycolipids Not Binding 7721812
Escherichia coli (class I/III) GL-IV glycolipid Glycolipids Not Binding 7721812
Escherichia coli (class II) Gb4 (Globoside; Globotetraose; P antigen) Oligoglycosylceramides GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Binding 11953368
Escherichia coli (class II) GL-II glycolipid Glycolipids Binding 7721812
Escherichia coli (class III) Gb4 (Globoside; Globotetraose; P antigen) Oligoglycosylceramides GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Not Binding 7721812
Escherichia coli (class III) Gb5 (Forssman glycolipid) Oligoglycosylceramides GalNAc(a1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer Binding 11953368

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