GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 351 - 375 of 499 in total
Pathway Name Protein Name UniProt ID ▼ Gene Symbol Organism GlyTouCan ID
Chk1/Chk2(Cds1) mediated inactivation of Cyclin B:Cdk1 complex
  • cdc-25.1
  • cdc-25.2
  • cdc-25.3
  • cdc-25.4
  • chkr-1
  • ftt-1
  • ftt-2
  • par-5
Caenorhabditis elegans
Ubiquitin Mediated Degradation of Phosphorylated Cdc25A
  • C14C10.5
  • CELE_F35G12.12
  • cdc-25.1
  • cdc-25.2
  • cdc-25.3
  • cdc-25.4
  • chk-1
  • chkr-1
  • pas-1
  • pas-2
  • pas-3
  • pas-4
  • pas-5
  • pas-6
  • pbs-1
  • pbs-2
  • pbs-3
  • pbs-4
  • pbs-5
  • pbs-7
  • psmd-9
  • psme-3
  • rpn-1
  • rpn-10
  • rpn-11
  • rpn-12
  • rpn-2
  • rpn-3
  • rpn-5
  • rpn-6.1
  • rpn-7
  • rpn-8
  • rpn-9
  • rpt-1
  • rpt-2
  • rpt-3
  • rpt-4
  • rpt-5
  • rpt-6
  • ubia
  • ubib
  • ubl-1
  • ubq-1
  • ubq-2
Caenorhabditis elegans
Regulation of TP53 Activity through Acetylation
  • B0025.4
  • akt-1
  • akt-2
  • chd-3
  • dcp-66
  • evl-11
  • hda-1
  • hda-3
  • let-418
  • lin-40
  • lin-49
  • lin-53
  • lsy-13
  • mys-4
  • nhl-2
  • nhl-3
  • rba-1
  • rba-2
  • tam-1
Caenorhabditis elegans
ABC-family proteins mediated transport
  • C14C10.5
  • CELE_F35G12.12
  • CELE_F48E8.4
  • CELE_Y105E8A.2
  • R151.6
  • abcf-1
  • abt-1
  • cdc-48.2
  • cup-2
  • der-1
  • eif-2alpha
  • eif-2beta
  • eif-2gamma
  • erl-1
  • haf-2
  • iftb-1
  • mrp-1
  • mrp-2
  • mrp-3
  • mrp-4
  • mrp-5
  • mrp-6
  • mrp-7
  • mrp-8
  • pas-1
  • pas-2
  • pas-3
  • pas-4
  • pas-5
  • pas-6
  • pbs-1
  • pbs-2
  • pbs-3
  • pbs-4
  • pbs-5
  • pbs-7
  • psmd-9
  • psme-3
  • rnf-5
  • rpn-1
  • rpn-10
  • rpn-11
  • rpn-12
  • rpn-2
  • rpn-3
  • rpn-5
  • rpn-6.1
  • rpn-7
  • rpn-8
  • rpn-9
  • rpt-1
  • rpt-2
  • rpt-3
  • rpt-4
  • rpt-5
  • rpt-6
  • sel-1
  • ubia
  • ubib
  • ubl-1
  • ubq-1
  • ubq-2
Caenorhabditis elegans
Vitamin B1 (thiamin) metabolism
  • folt-1
  • folt-2
  • folt-3
  • hpo-12
  • tag-330
  • tpk-1
Caenorhabditis elegans
Class C/3 (Metabotropic glutamate/pheromone receptors)
  • CELE_F35H10.10
  • gbb-1
  • gbb-2
  • mgl-1
  • mgl-2
  • mgl-3
Caenorhabditis elegans
COPI-independent Golgi-to-ER retrograde traffic
  • C45B2.6
  • arp-1
  • arp-11
  • bicd-1
  • cap-1
  • cap-2
  • dhc-1
  • dlc-1
  • dlc-2
  • dlc-3
  • dlc-4
  • dlc-5
  • dlc-6
  • dli-1
  • dnc-1
  • dnc-2
  • dnc-4
  • dnc-5
  • dnc-6
  • dyci-1
  • gly-3
  • gly-4
  • lis-1
  • pnm-1
  • rab-18
  • rab-6.1
  • rab-6.2
  • rbg-1
  • rbg-2
Caenorhabditis elegans
RHOF GTPase cycle
  • CELE_T09B4.2
  • aap-1
  • abts-1
  • act-1
  • act-2
  • act-3
  • act-4
  • add-1
  • add-2
  • aex-4
  • atn-1
  • cap-2
  • cav-1
  • cav-2
  • cyk-1
  • esyt-2
  • frm-3
  • gap
  • gei-18
  • hum-7
  • ifa-1
  • ifa-2
  • ifa-3
  • ifa-4
  • ifb-1
  • ifb-2
  • ifc-1
  • ifc-2
  • ifd-1
  • ifd-2
  • ifp-1
  • inft-2
  • lam-1
  • let-99
  • lmn-1
  • mtm-1
  • mtm-3
  • mua-6
  • pac-1
  • rab-7
  • rga-1
  • rga-5
  • rho-1
  • rhoa
  • ric-4
  • snb-1
  • srgp-1
  • syd-1
  • tag-325
  • tag-81
  • toe-2
  • ulp-1
  • vang-1
Caenorhabditis elegans
G alpha (z) signalling events
  • acy-1
  • acy-2
  • acy-3
  • acy-4
  • eat-11
  • gbp-2
  • gpa-5
  • gpb-1
  • gpb-2
  • gpc-1
  • gpc-2
  • rgs-1
  • rgs-10
  • rgs-11
  • rgs-2
  • rgs-3
  • rgs-4
  • rgs-6
  • rgs-7
  • rgs-8.1
  • rgs-8.2
  • rgs-9
  • ser-2
  • tyra-2
Caenorhabditis elegans
Glucagon-like Peptide-1 (GLP1) regulates insulin secretion
  • dec-4
  • epac-1
  • exp-2
  • itr-1
  • kin-1
  • kvs-1
  • kvs-2
  • kvs-3
  • kvs-4
  • kvs-5
  • lfe-1
  • rap-1
  • shw-1
Caenorhabditis elegans
Intracellular metabolism of fatty acids regulates insulin secretion
  • C03F11.3
  • R07B1.3
  • acs-17
  • acs-4
  • scav-2
  • scav-3
  • scav-4
  • scav-6
Caenorhabditis elegans
Synthesis of very long-chain fatty acyl-CoAs
  • CELE_R10E4.9
  • acs-13
  • acs-17
  • acs-4
  • art-1
  • dhs-5
  • elo-1
  • elo-2
  • elo-3
  • elo-4
  • elo-5
  • elo-6
  • elo-7
  • elo-8
  • elo-9
  • hpo-8
Caenorhabditis elegans
RHO GTPases activate PKNs
  • CELE_F55C10.5
  • CELE_W04B5.5
  • cdc-25.1
  • cdc-25.2
  • cdc-25.3
  • cdc-25.4
  • ced-10
  • ftt-1
  • ftt-2
  • gsp-1
  • mel-11
  • par-5
  • pkn-1
  • rac-1
  • rho-1
  • rhoa
Caenorhabditis elegans
PTK6 Down-Regulation
  • CELE_Y47G6A.5
  • nipi-4
  • trk-1
Caenorhabditis elegans
ERBB2 Activates PTK6 Signaling
  • CELE_F14B4.1
  • CELE_Y47G6A.5
  • kin-7
  • let-23
  • nipi-4
  • rme-2
  • trk-1
Caenorhabditis elegans
PTK6 Regulates RHO GTPases, RAS GTPase and MAP kinases
  • CELE_Y47G6A.5
  • ced-10
  • ced-12
  • ced-2
  • ced-5
  • nipi-4
  • rac-1
  • rga-5
  • rho-1
  • rhoa
  • trk-1
Caenorhabditis elegans
PTK6 Regulates RTKs and Their Effectors AKT1 and DOK1
  • CELE_F23H11.4
  • CELE_Y47G6A.5
  • akt-1
  • akt-2
  • nipi-4
  • rog-1
  • sli-1
  • trk-1
  • ubia
  • ubib
  • ubl-1
  • ubq-1
  • ubq-2
Caenorhabditis elegans
PTK6 Regulates Proteins Involved in RNA Processing
  • CELE_Y47G6A.5
  • nipi-4
  • nono-1
  • trk-1
Caenorhabditis elegans
COPI-dependent Golgi-to-ER retrograde traffic
  • CELE_K02B12.7
  • CELE_Y59A8B.25
  • CELE_Y59A8B.8
  • F07F6.4
  • Y110A7A.11
  • arc-1
  • arf-1
  • arf-1.1
  • arf-1.2
  • arf-3
  • arf-5
  • arl-4
  • arl-6
  • bmk-1
  • copa-1
  • copb-1
  • copb-2
  • copd-1
  • cope-1
  • copg-1
  • copz-1
  • cyk-4
  • czw-1
  • erd-2
  • erd-2.1
  • erd-2.2
  • gbf-1
  • kap-1
  • khc-1
  • klc-1
  • klc-2
  • klp-11
  • klp-12
  • klp-13
  • klp-15
  • klp-18
  • klp-19
  • klp-20
  • klp-4
  • klp-6
  • klp-7
  • nsf-1
  • phi-34
  • rab-1
  • sec-20
  • sec-22
  • sel-9
  • sft-4
  • smgl-1
  • snap-1
  • surf-4
  • syx-18
  • tmed-10
  • tmed-3
  • unc-104
  • unc-116
  • vab-8
  • zen-4
Caenorhabditis elegans
CS/DS degradation
  • Chnase
  • chhy-1
  • hex-1
  • sul-3
Caenorhabditis elegans
Extra-nuclear estrogen signaling
  • CELE_F14B4.1
  • aap-1
  • age-1
  • akt-1
  • akt-2
  • cal-5
  • cash-1
  • daf-21
  • kin-32
  • kin-7
  • let-23
  • rme-2
  • sphk-1
  • src-1
  • tag-274
Caenorhabditis elegans
Acyl chain remodelling of PG
  • C03H5.4
  • C07E3.9
  • C31H1.5
  • CELE_Y69A2AL.2
  • acl-14
  • clec-148
  • clec-161
  • clec-178
  • clec-48
  • clec-49
  • clec-50
  • clec-51
  • clec-52
  • clec-53
  • clec-89
  • crls-1
Caenorhabditis elegans
Golgi Associated Vesicle Biogenesis
  • CELE_W02D9.2
  • F13E6.1
  • apb-1
  • apb-3
  • apg-1
  • apm-1
  • aps-1
  • aps-3
  • arc-1
  • arf-1
  • arf-1.1
  • arf-1.2
  • arl-4
  • arl-6
  • arr-1
  • chc-1
  • clic-1
  • cpd-1
  • dnj-25
  • dyn-1
  • gcp-2.1
  • gcp-2.2
  • hipr-1
  • lst-4
  • ncap-1
  • ocrl-1
  • rab-5
  • snb-1
  • snb-2
  • snb-5
  • snb-6
  • snb-7
  • snpn-1
  • snx-1
  • snx-6
  • tbc-9
  • unc-101
  • unc-11
  • unc-57
  • vamp-7
Caenorhabditis elegans
mTORC1-mediated signalling
  • CeTor
  • F13H10.3
  • daf-15
  • efk-1
  • fkb-2
  • fkb-8
  • ftt-1
  • ftt-2
  • ifg-1
  • let-363
  • lmtr-2
  • lmtr-3
  • lmtr-5
  • mlst-8
  • par-5
  • raga-1
  • ragc-1
  • rheb-1
  • rps-6
  • rsks-1
Caenorhabditis elegans
L13a-mediated translational silencing of Ceruloplasmin expression
  • C16C8.14
  • C16C8.16
  • C16C8.20
  • C37A2.7
  • CELE_F57B9.3
  • CELE_W01D2.1
  • CELE_Y37E3.8
  • cif-1
  • csn-7
  • drr-2
  • egl-45
  • eif-1.A
  • eif-1.a
  • eif-2alpha
  • eif-2beta
  • eif-2gamma
  • eif-3.A
  • eif-3.B
  • eif-3.C
  • eif-3.D
  • eif-3.E
  • eif-3.F
  • eif-3.G
  • eif-3.H
  • eif-3.I
  • eif-3.J
  • eif-3.K
  • eif-3.L
  • eif-3.M
  • eif-3.j
  • ife-1
  • ife-2
  • ife-3
  • ife-5
  • ifg-1
  • iftb-1
  • inf-1
  • pab-1
  • rla-0
  • rla-1
  • rpa-0
  • rpa-1
  • rpl-1
  • rpl-10
  • rpl-10a
  • rpl-11.2
  • rpl-12
  • rpl-13
  • rpl-14
  • rpl-15
  • rpl-16
  • rpl-17
  • rpl-18
  • rpl-19
  • rpl-2
  • rpl-20
  • rpl-21
  • rpl-22
  • rpl-23
  • rpl-24.1
  • rpl-25.2
  • rpl-26
  • rpl-27
  • rpl-28
  • rpl-29
  • rpl-3
  • rpl-30
  • rpl-31
  • rpl-32
  • rpl-33
  • rpl-35
  • rpl-36
  • rpl-36.A
  • rpl-37a
  • rpl-38
  • rpl-39
  • rpl-4
  • rpl-41
  • rpl-43
  • rpl-5
  • rpl-6
  • rpl-7
  • rpl-7A
  • rpl-8
  • rpl-9
  • rps-0
  • rps-1
  • rps-10
  • rps-11
  • rps-12
  • rps-13
  • rps-14
  • rps-15
  • rps-16
  • rps-17
  • rps-18
  • rps-19
  • rps-2
  • rps-20
  • rps-21
  • rps-22
  • rps-23
  • rps-24
  • rps-25
  • rps-26
  • rps-27
  • rps-28
  • rps-29
  • rps-3
  • rps-4
  • rps-5
  • rps-6
  • rps-7
  • rps-8
  • rps-9
  • ubl-1
Caenorhabditis elegans

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

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Supported by JST NBDC Grant Number JPMJND2204

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Last updated: August 19, 2024