GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 376 - 400 of 499 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism ▲ GlyTouCan ID
SDK interactions
  • rig-4
Caenorhabditis elegans
Regulation of localization of FOXO transcription factors
  • akt-1
  • akt-2
  • daf-16
  • ftt-1
  • ftt-2
  • par-5
Caenorhabditis elegans
Cargo concentration in the ER
  • C28G1.2
  • CELE_F15D3.4
  • CELE_F44G3.7
  • cle-1
  • cni-1
  • cnih-2
  • cpz-1
  • glr-1
  • glr-2
  • glr-3
  • glr-4
  • glr-5
  • glr-6
  • glr-7
  • gosr-2.1
  • ile-1
  • ile-2
  • memb-1
  • sar-1
  • sec-22
  • sec-23
  • sec-24.1
  • sec-24.2
  • srp-1
  • srp-2
  • srp-3
  • srp-6
  • srp-7
  • srp-8
  • syn-3
  • syx-5
Caenorhabditis elegans
WNT ligand biogenesis and trafficking
  • cwn-1
  • cwn-2
  • egl-20
  • let-553
  • lin-44
  • mig-14
  • mom-2
  • mom-3
  • pvl-2
  • snx-3
  • tmed-1
  • vps-26
  • vps-29
  • vps-35
  • wnt-1
  • wnt-2
Caenorhabditis elegans
Presynaptic depolarization and calcium channel opening
  • STG-1
  • ccb-1
  • ccb-2
  • stg-1
  • stg-2
  • unc-2
  • unc-36
  • unc-72
Caenorhabditis elegans
Netrin-1 signaling
  • ceh-6
  • erm-1
  • lam-1
  • siah-1
  • tpa-1
  • unc-40
  • unc-5
Caenorhabditis elegans
Regulation of RUNX3 expression and activity
  • CELE_F35G12.12
  • bro-1
  • cet-1
  • daf-7
  • dbl-1
  • mab-2
  • pas-1
  • pas-2
  • pas-3
  • pas-4
  • pas-5
  • pas-6
  • pbs-1
  • pbs-2
  • pbs-3
  • pbs-4
  • pbs-5
  • pbs-7
  • psmd-9
  • psme-3
  • rnt-1
  • rpn-1
  • rpn-10
  • rpn-11
  • rpn-12
  • rpn-2
  • rpn-3
  • rpn-5
  • rpn-6.1
  • rpn-7
  • rpn-8
  • rpn-9
  • rpt-1
  • rpt-2
  • rpt-3
  • rpt-4
  • rpt-5
  • rpt-6
  • run-1
  • src-1
  • ubia
  • ubib
  • ubl-1
  • ubq-1
  • ubq-2
  • unc-129
Caenorhabditis elegans
Regulation of PTEN localization
  • daf-18
  • math-33
  • nhl-2
  • nhl-3
  • tam-1
  • ubia
  • ubib
  • ubl-1
  • ubq-1
  • ubq-2
  • usp-7
Caenorhabditis elegans
Peptide ligand-binding receptors
  • C28G1.2
  • CELE_F15D3.4
  • CELE_F44G3.7
  • npr-25
  • srp-1
  • srp-2
  • srp-3
  • srp-6
  • srp-7
  • srp-8
Caenorhabditis elegans
RNA Pol II CTD phosphorylation and interaction with CE
  • ama-1
  • cdk-7
  • cel-1
  • gtf-2F1
  • gtf-2F2
  • gtf-2H1
  • gtf-2H2C
  • gtf-2H3
  • gtf-2H4
  • gtf-2H5
  • gtf-2f1
  • gtf-2f2
  • gtf-2h1
  • gtf-2h3
  • mnat-1
  • rpb-1
  • rpb-10
  • rpb-11
  • rpb-12
  • rpb-2
  • rpb-3
  • rpb-4
  • rpb-5
  • rpb-6
  • rpb-7
  • rpb-8
  • rpb-9
  • spt-5
  • tag-72
  • xpb-1
  • xpd-1
Caenorhabditis elegans
Nicotinamide salvaging
  • R107.2
  • Y18D10A.3
  • anmt-1
  • ndx-9
  • nprt-1
  • oct-1
  • slc-5A12
Caenorhabditis elegans
Adrenaline signalling through Alpha-2 adrenergic receptor
  • ser-2
  • tyra-2
Caenorhabditis elegans
Metabolism of Angiotensinogen to Angiotensins
  • AC3.5
  • C28G1.2
  • CELE_F02D8.4
  • CELE_F15D3.4
  • CELE_F41C6.4
  • CELE_F44G3.7
  • CELE_F49B2.6
  • CELE_R03G8.6
  • CELE_T06A4.1
  • CELE_T06A4.3
  • CELE_T12E12.6
  • CELE_W01A8.6
  • CELE_Y18H1A.9
  • CELE_Y42A5A.1
  • CELE_Y53F4B.20
  • CELE_Y59C2A.1
  • CELE_Y67D8C.9
  • CELE_ZC434.9
  • T16G12.1
  • acn-1
  • anp-1
  • asp-1
  • asp-10
  • asp-12
  • asp-13
  • asp-14
  • asp-15
  • asp-16
  • asp-17
  • asp-18
  • asp-19
  • asp-2
  • asp-3
  • asp-4
  • asp-5
  • asp-6
  • asp-7
  • asp-8
  • asp-9
  • cest-1
  • cest-1.1
  • cest-1.2
  • cest-12
  • cest-13
  • cest-16
  • cest-17
  • cest-19
  • cest-2.1
  • cest-2.2
  • cest-2.3
  • cest-24
  • cest-26
  • cpz-1
  • ges-1
  • hrg-7
  • nep-1
  • nep-10
  • nep-11
  • nep-12
  • nep-13
  • nep-16
  • nep-17
  • nep-18
  • nep-2
  • nep-20
  • nep-21
  • nep-22
  • nep-23
  • nep-24
  • nep-25
  • nep-26
  • nep-3
  • nep-4
  • nep-6
  • nep-8
  • nep-9
  • pam-1
  • srp-1
  • srp-2
  • srp-3
  • srp-6
  • srp-7
  • srp-8
  • suro-1
  • vha-20
Caenorhabditis elegans
SUMOylation of DNA damage response and repair proteins
  • CELE_T02C1.2
  • CELE_ZK1248.11
  • brc-1
  • coh-1
  • coh-2
  • gei-17
  • hda-4
  • hda-7
  • him-1
  • nhl-2
  • nhl-3
  • nse-1
  • nse-4
  • pis-1
  • rad-21.1
  • rec-8
  • scc-1
  • scc-3
  • smc-1
  • smc-3
  • smc-5
  • smc-6
  • smo-1
  • smt3
  • sumo
  • tam-1
  • ubc-9
  • xpc-1
Caenorhabditis elegans
RHOF GTPase cycle
  • CELE_T09B4.2
  • aap-1
  • abts-1
  • act-1
  • act-2
  • act-3
  • act-4
  • add-1
  • add-2
  • aex-4
  • atn-1
  • cap-2
  • cav-1
  • cav-2
  • cyk-1
  • esyt-2
  • frm-3
  • gap
  • gei-18
  • hum-7
  • ifa-1
  • ifa-2
  • ifa-3
  • ifa-4
  • ifb-1
  • ifb-2
  • ifc-1
  • ifc-2
  • ifd-1
  • ifd-2
  • ifp-1
  • inft-2
  • lam-1
  • let-99
  • lmn-1
  • mtm-1
  • mtm-3
  • mua-6
  • pac-1
  • rab-7
  • rga-1
  • rga-5
  • rho-1
  • rhoa
  • ric-4
  • snb-1
  • srgp-1
  • syd-1
  • tag-325
  • tag-81
  • toe-2
  • ulp-1
  • vang-1
Caenorhabditis elegans
Regulation of PTEN stability and activity
  • 1G758
  • C14C10.5
  • CELE_F35G12.12
  • CELE_Y105E8A.14
  • CELE_Y47G6A.14
  • CELE_Y92H12A.2
  • akt-1
  • akt-2
  • chn-1
  • daf-18
  • duo-1
  • kin-10
  • kin-22
  • kin-3
  • kin-5
  • lep-2
  • pas-1
  • pas-2
  • pas-3
  • pas-4
  • pas-5
  • pas-6
  • pbs-1
  • pbs-2
  • pbs-3
  • pbs-4
  • pbs-5
  • pbs-7
  • psmd-9
  • psme-3
  • rpn-1
  • rpn-10
  • rpn-11
  • rpn-12
  • rpn-2
  • rpn-3
  • rpn-5
  • rpn-6.1
  • rpn-7
  • rpn-8
  • rpn-9
  • rpt-1
  • rpt-2
  • rpt-3
  • rpt-4
  • rpt-5
  • rpt-6
  • src-2
  • ubia
  • ubib
  • ubl-1
  • ubq-1
  • ubq-2
  • wwp-1
Caenorhabditis elegans
COPI-dependent Golgi-to-ER retrograde traffic
  • CELE_K02B12.7
  • CELE_Y59A8B.25
  • CELE_Y59A8B.8
  • F07F6.4
  • Y110A7A.11
  • arc-1
  • arf-1
  • arf-1.1
  • arf-1.2
  • arf-3
  • arf-5
  • arl-4
  • arl-6
  • bmk-1
  • copa-1
  • copb-1
  • copb-2
  • copd-1
  • cope-1
  • copg-1
  • copz-1
  • cyk-4
  • czw-1
  • erd-2
  • erd-2.1
  • erd-2.2
  • gbf-1
  • kap-1
  • khc-1
  • klc-1
  • klc-2
  • klp-11
  • klp-12
  • klp-13
  • klp-15
  • klp-18
  • klp-19
  • klp-20
  • klp-4
  • klp-6
  • klp-7
  • nsf-1
  • phi-34
  • rab-1
  • sec-20
  • sec-22
  • sel-9
  • sft-4
  • smgl-1
  • snap-1
  • surf-4
  • syx-18
  • tmed-10
  • tmed-3
  • unc-104
  • unc-116
  • vab-8
  • zen-4
Caenorhabditis elegans
Recycling of bile acids and salts
  • C31H5.6
  • CELE_F21G4.1
  • CELE_K02D3.2
  • CELE_K05B2.4
  • CELE_T05E7.1
  • CELE_W03D8.8
  • CELE_Y71G10AR.4
  • acs-20
  • acs-22
  • lbp-5
  • lbp-6
  • lbp-7
  • lbp-8
  • mrp-1
  • mrp-2
  • mrp-3
  • mrp-4
  • mrp-7
  • mrp-8
Caenorhabditis elegans
Hydrolysis of LPC
  • plag-15
Caenorhabditis elegans
Arachidonic acid metabolism
  • CELE_K07B1.4
  • CELE_Y53F4B.18
  • CELE_Y53G8B.2
  • dgat-2
  • dgtr-1
  • faah-1
  • faah-2
  • faah-3
  • faah-4
  • faah-5
  • faah-6
Caenorhabditis elegans
FRS-mediated FGFR4 signaling
  • egl-15
  • egl-17
  • klo-1
  • klo-2
  • let-341
  • let-60
  • let-756
  • lin-34
  • sem-5
  • sos-1
Caenorhabditis elegans
Antigen Presentation: Folding, assembly and peptide loading of class I MHC
  • AC3.5
  • CELE_F49B2.6
  • CELE_R03G8.6
  • CELE_T12E12.6
  • CELE_Y42A5A.1
  • CELE_Y53F4B.20
  • CELE_Y67D8C.9
  • T16G12.1
  • anp-1
  • haf-2
  • haf-4
  • haf-7
  • haf-8
  • haf-9
  • pam-1
  • sar-1
  • sec-23
  • sec-24.1
  • sec-24.2
Caenorhabditis elegans
Apoptotic cleavage of cellular proteins
  • acin-1
  • apr-1
  • ced-3
  • fnta-1
  • let-502
  • tpa-1
Caenorhabditis elegans
Frs2-mediated activation
  • ftt-1
  • ftt-2
  • lin-45
  • mek-2
  • mpk-1
  • par-5
  • raf-1
  • rap-1
  • sur-1
Caenorhabditis elegans
Insertion of tail-anchored proteins into the endoplasmic reticulum membrane
  • alh-4
  • alh-5
  • apl-1
  • cytb-5.1
  • emo-1
  • oar-1
  • sec-61.B
  • sec-61.G
  • sec-61.b
  • serp-1.1
  • sgt-1
  • snb-1
  • snb-2
  • snb-5
  • snb-6
  • snb-7
  • syn-3
  • syx-5
  • ubc-26
  • unc-64
  • vamp-7
  • vpr-1
Caenorhabditis elegans

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

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Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024