GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **401 - 425** of **499** in total

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Pathway Name	Protein Name	UniProt ID ▲	Gene Symbol	Organism	GlyTouCan ID
Drug-mediated inhibition of MET activation	Kringle domain-containing protein Protein kinase domain-containing protein Tyrosine-protein kinase receptor svh-2	H2KZU7 P91823 Q9XVQ7	CELE_F11E6.8 CELE_T22A3.6 svh-2	Caenorhabditis elegans
Rap1 signalling	14-3-3-like protein 1 14-3-3-like protein 2 Raf homolog serine/threonine-protein kinase Rap guanine nucleotide exchange factor 1 Rap-GAP domain-containing protein Rap-GAP domain-containing protein Ras guanyl-releasing protein 3 Ras-related protein Rap-1 cAMP-dependent protein kinase catalytic subunit cGMP-dependent protein kinase egl-4	H2L055 H2L2C2 O76360 P21137 P34578 P41932 Q07292 Q18246 Q19770 Q20655	CELE_F53A10.2 cgk-1 egl-4 epac-1 ftt-1 ftt-2 kin-1 lin-45 odr-9 par-5 raf-1 rap-1 rgef-1 sipa-1	Caenorhabditis elegans
MHC class II antigen presentation	Carboxypeptidase Carboxypeptidase Carboxypeptidase Cathepsin F Cathepsin L-like GILT-like protein F37H8.5 Peptidase C1A papain C-terminal domain-containing protein Serine carboxypeptidase ctsa-1.1 Serine carboxypeptidase ctsa-1.2 Serine carboxypeptidase ctsa-3.1 Serine carboxypeptidase ctsa-3.2 Serine carboxypeptidase ctsa-4.1	K8ESM2 O16454 O17861 O45734 O76725 P52714 P52715 P52716 P52717 Q09991 Q20950 Q94269	CELE_Y16B4A.2 F37H8.5 cpl-1 cpr-9 ctsa-1 ctsa-1.1 ctsa-1.2 ctsa-2 ctsa-3.1 ctsa-3.2 ctsa-4.1 ctsa-4.2 drd-7 tag-196	Caenorhabditis elegans
Melanin biosynthesis	Putative tyrosinase-like protein tyr-1 Putative tyrosinase-like protein tyr-3 ShKT domain-containing protein ShKT domain-containing protein ShKT domain-containing protein Tyrosinase copper-binding domain-containing protein Tyrosinase copper-binding domain-containing protein	O01497 O76708 P34269 Q19673 Q93787 Q95XC6 Q9XUS8	CELE_F54E4.4 tyr-1 tyr-2 tyr-3 tyr-4 tyr-5 tyr-6	Caenorhabditis elegans
Endosomal Sorting Complex Required For Transport (ESCRT)	Charged multivesicular body protein 2a Charged multivesicular body protein 2b Charged multivesicular body protein 3 Charged multivesicular body protein 4b Charged multivesicular body protein 4b Charged multivesicular body protein 6 Charged multivesicular body protein 7 Hepatocyte growth factor-regulated tyrosine kinase substrate Multivesicular body subunit 12A Polyubiquitin-A Signal transducing adapter molecule 1 Tumor susceptibility gene 101 protein UBA domain-containing protein Ubiquitin-like protein 1-ribosomal protein eS31 fusion protein Ubiquitin-ribosomal protein eL40 fusion protein VPS37 C-terminal domain-containing protein Vacuolar protein sorting-associated protein 28 homolog Vacuolar protein-sorting-associated protein 25 Vacuolar protein-sorting-associated protein 36 Vacuolar-sorting protein SNF8	O01498 O02208 O44158 O76258 P0CG71 P37165 P49632 Q17687 Q17796 Q18258 Q18886 Q19519 Q21959 Q22718 Q8WTK0 Q9BL60 Q9GYK4 Q9NA26 Q9U2F6 Q9U354	C01A2.4 CELE_R12C12.5 chmp-7 hgrs-1 mvb-12 pqn-19 spe-48 stam-1 tsg-101 ubia ubib ubl-1 ubq-1 ubq-2 vps-2 vps-20 vps-22 vps-24 vps-25 vps-28 vps-32.1 vps-36 vps-37	Caenorhabditis elegans
Regulation of ornithine decarboxylase (ODC)	26S protease regulatory subunit 6A 26S proteasome non-ATPase regulatory subunit 13 26S proteasome non-ATPase regulatory subunit 14 26S proteasome non-ATPase regulatory subunit 1 26S proteasome non-ATPase regulatory subunit 2 26S proteasome non-ATPase regulatory subunit 3 26S proteasome non-ATPase regulatory subunit 4 26S proteasome non-ATPase regulatory subunit 5 26S proteasome non-ATPase regulatory subunit 6 26S proteasome non-ATPase regulatory subunit 8 26S proteasome regulatory subunit 7 26S proteasome regulatory subunit 8 Antizyme inhibitor 1 MPN domain-containing protein Ornithine decarboxylase antizyme Ornithine decarboxylase PCI domain-containing protein Probable 26S proteasome non-ATPase regulatory subunit 9 Probable 26S proteasome regulatory subunit 10B Probable 26S proteasome regulatory subunit 4 Probable 26S proteasome regulatory subunit 6B Probable 26S proteasome regulatory subunit rpn-6.1 Proteasome activator complex subunit 3 Proteasome activator complex subunit 4 Proteasome subunit alpha type-1 Proteasome subunit alpha type-2 Proteasome subunit alpha type-4 Proteasome subunit alpha type-5 Proteasome subunit alpha type-6 Proteasome subunit alpha type-7 Proteasome subunit beta type-2 Proteasome subunit beta type-3 Proteasome subunit beta Proteasome subunit beta Proteasome subunit beta Proteasome subunit pbs-5	O01579 O16368 O17071 O17586 O44156 O61742 O61792 O62102 O76371 O76577 P41931 P46502 P90868 P91477 Q04908 Q10920 Q17971 Q18115 Q18787 Q19324 Q20058 Q20585 Q20938 Q22253 Q23237 Q23449 Q27488 Q95005 Q95008 Q95PZ7 Q966I8 Q9GZH5 Q9N599 Q9NHZ6 Q9XTT9 Q9XUV0	C14C10.5 CELE_F35G12.12 CELE_F53F10.2 oaz-1 odc-1 pas-1 pas-2 pas-3 pas-4 pas-5 pas-6 pbs-1 pbs-2 pbs-3 pbs-4 pbs-5 pbs-7 psmd-9 psme-3 rpn-1 rpn-10 rpn-11 rpn-12 rpn-2 rpn-3 rpn-5 rpn-6.1 rpn-7 rpn-8 rpn-9 rpt-1 rpt-2 rpt-3 rpt-4 rpt-5 rpt-6	Caenorhabditis elegans
Sensory perception of salty taste	Acid-sensing ion channel 1 Amiloride-sensitive sodium channel Amiloride-sensitive sodium channel DEgenerin Like Degenerin deg-1 Degenerin del-1 Degenerin mec-10 Degenerin mec-4 Degenerin unc-8 Degenerin-like protein asic-1 Degenerin-like protein asic-2 Degenerin-like protein unc-105 EGF-like domain-containing protein EGF-like domain-containing protein EGF-like domain-containing protein EGF-like domain-containing protein	O01635 P24585 P24612 P34886 P91835 Q09274 Q19038 Q19777 Q20852 Q21974 Q22851 Q8MPW0 Q93597 Q9U1T8 Q9U1T9 Q9XTS9	asic-1 asic-2 deg-1 degt-1 del-1 del-3 del-4 del-6 egas-1 egas-2 egas-3 egas-4 mec-10 mec-13 mec-4 unc-105 unc-8	Caenorhabditis elegans
FGFR2 alternative splicing	DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit rpb-9 DNA-directed RNA polymerase RpoA/D/Rpb3-type domain-containing protein DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 General transcription factor IIF subunit 2 Heterogeneous nuclear ribonucleoprotein A1 Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 Probable DNA-directed RNA polymerase II subunit RPB11 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 Putative RNA-binding protein PTB-1a Putative RNA-binding protein R05D3.8 RNA polymerase Rpb4/RPC9 core domain-containing protein RRM domain-containing protein Transcription initiation factor IIF subunit alpha	O01763 O02092 P16356 P34541 Q10578 Q17558 Q17684 Q18999 Q19826 Q22037 Q4W5P0 Q8MYM8 Q93338 Q93594 Q965S0 Q9GR61 Q9N3C9 Q9N5K2 Q9U3I0 Q9XVH6	R05D3.8 ama-1 cbp-20 cbp-80 gtf-2F1 gtf-2F2 gtf-2f1 gtf-2f2 hrp-1 ncbp-1 ncbp-2 ptb-1 rbp-1 rpb-1 rpb-10 rpb-11 rpb-12 rpb-2 rpb-3 rpb-4 rpb-5 rpb-6 rpb-7 rpb-8 rpb-9 sqd-1	Caenorhabditis elegans
SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs	C2H2-type domain-containing protein Histone RNA hairpin-binding protein Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 Probable small nuclear ribonucleoprotein E Probable small nuclear ribonucleoprotein F Probable small nuclear ribonucleoprotein G Probable small nuclear ribonucleoprotein-associated protein B Sm domain-containing protein Sm domain-containing protein Small nuclear ribonucleoprotein Sm D3	O01763 P34659 P91918 Q09599 Q17348 Q7YWY5 Q93594 Q9GYQ8 Q9N4G9 Q9XTU6 V6CKC3	C49H3.4 CELE_K07A1.15 cbp-20 cbp-80 cdl-1 ncbp-1 ncbp-2 snr-1 snr-2 snr-5 snr-6 snr-7 znf-236	Caenorhabditis elegans
SLBP independent Processing of Histone Pre-mRNAs	C2H2-type domain-containing protein Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 Probable small nuclear ribonucleoprotein E Probable small nuclear ribonucleoprotein F Probable small nuclear ribonucleoprotein G Probable small nuclear ribonucleoprotein-associated protein B Sm domain-containing protein Sm domain-containing protein Small nuclear ribonucleoprotein Sm D3	O01763 P34659 P91918 Q17348 Q7YWY5 Q93594 Q9GYQ8 Q9N4G9 Q9XTU6 V6CKC3	C49H3.4 CELE_K07A1.15 cbp-20 cbp-80 ncbp-1 ncbp-2 snr-1 snr-2 snr-5 snr-6 snr-7 znf-236	Caenorhabditis elegans
Proton/oligopeptide cotransporters	Peptide transporter 3 Peptide transporter family 1 Peptide transporter family 2	O01840 Q17758 Q21219	cpta cptb opt-1 opt-2 opt-3 pep-1 pep-2 pept-1 pept-2 pept-3	Caenorhabditis elegans
O-glycosylation of TSR domain-containing proteins	A disintegrin and metalloproteinase with thrombospondin motifs gon-1 Apple domain-containing protein GDP-fucose protein O-fucosyltransferase 2 N-acetylgalactosaminide beta-1,3-galactosyltransferase SMB domain-containing protein ShKT domain-containing protein Spondin-1 Thrombospondin type-1 domain-containing protein 1	O01878 O18003 Q19284 Q19305 Q19349 Q19791 Q22631 Q8WR51	CELE_F09F9.4 CELE_F11C7.2 CELE_T21B6.3 CELE_ZC250.2 gon-1 pad-2 sbsp-1 spon-1	Caenorhabditis elegans
Arachidonic acid metabolism	Acyltransferase Acyltransferase Acyltransferase Acyltransferase Amidase domain-containing protein Amidase domain-containing protein Amidase domain-containing protein Amidase domain-containing protein Amidase domain-containing protein Fatty acid amide hydrolase 1 Monoglyceride lipase faah-4	O01881 O45089 Q17447 Q17449 Q23067 Q9N4S3 Q9NAB7 Q9U217 Q9U243 Q9U2I8 Q9XUW0	CELE_K07B1.4 CELE_Y53F4B.18 CELE_Y53G8B.2 dgat-2 dgtr-1 faah-1 faah-2 faah-3 faah-4 faah-5 faah-6	Caenorhabditis elegans
Glycosphingolipid catabolism	Acid ceramidase Alpha-galactosidase Beta-galactosidase Beta-hexosaminidase A Bis(5'-adenosyl)-triphosphatase Glycoside hydrolase 35 catalytic domain-containing protein Glycoside hydrolase family 1 protein Glycoside hydrolase family 1 protein Non-lysosomal glucosylceramidase Putative galactocerebrosidase Putative glucosylceramidase 4 Putative neutral sphingomyelinase Saposin B-type domain-containing protein Saposin B-type domain-containing protein Sphingomyelin phosphodiesterase 2 Sphingomyelin phosphodiesterase 4 Uncharacterized protein	O01893 O02106 O45686 O45870 O76632 Q17540 Q18276 Q18279 Q18758 Q21801 Q22492 Q23498 Q27526 Q95QT2 Q95ZR2 Q9TZA0 Q9UB00	C01B10.9 C29E4.10 CELE_R05D11.9 CELE_R08F11.1 T27F6.6 asah-1 asm-2 bgal-1 bgal-2 gana-1 gba-4 hex-1 klo-1 klo-2 mlt-8 spp-10 spp-8	Caenorhabditis elegans	G09546QO G27025MB G58161NS
Estrogen-dependent gene expression	Cyclin-T1.1 Cyclin-T1.2 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit rpb-9 DNA-directed RNA polymerase RpoA/D/Rpb3-type domain-containing protein DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 General transcription factor IIF subunit 2 Probable DNA-directed RNA polymerase II subunit RPB11 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 Probable cyclin-dependent kinase 9 RNA polymerase Rpb4/RPC9 core domain-containing protein Transcription initiation factor IIF subunit alpha	O02092 P16356 P34424 P34425 Q10578 Q17558 Q17684 Q19826 Q8MYM8 Q93338 Q965S0 Q9GR61 Q9N3C9 Q9N5K2 Q9TVL3 Q9U3I0 Q9XVH6	ama-1 cdk-9 cit-1.1 cit-1.2 gtf-2F1 gtf-2F2 gtf-2f1 gtf-2f2 rpb-1 rpb-10 rpb-11 rpb-12 rpb-2 rpb-3 rpb-4 rpb-5 rpb-6 rpb-7 rpb-8 rpb-9	Caenorhabditis elegans
Drug-mediated inhibition of ERBB2 signaling	Heat shock protein 90 Probable Hsp90 co-chaperone cdc37 Receptor tyrosine-protein kinase let-23	O02108 P24348 Q18688	cdc-37 daf-21 kin-7 let-23	Caenorhabditis elegans
Adrenaline signalling through Alpha-2 adrenergic receptor	Tyramine receptor Ser-2 Tyramine receptor tyra-2	O02213 Q19084	ser-2 tyra-2	Caenorhabditis elegans
Astrocytic Glutamate-Glutamine Uptake And Metabolism	Amino acid transporter Amino acid transporter Excitatory amino acid transporter Glutamine synthetase Probable glutamine synthetase Putative sodium-dependent excitatory amino acid transporter glt-3 Putative sodium-dependent excitatory amino acid transporter glt-4 Putative sodium-dependent excitatory amino acid transporter glt-6 glutamine synthetase glutamine synthetase glutamine synthetase	O02225 O18210 P34497 Q10901 Q21353 Q21751 Q22682 Q95YD1 Q9U307 Q9UAY8 Q9XVU2	gln-1 gln-2 gln-3 gln-5 gln-6 glt-1 glt-3 glt-4 glt-5 glt-6 glt-7	Caenorhabditis elegans
Transport of bile salts and organic acids, metal ions and amine compounds	Choline transporter-like protein 1 High-affinity choline transporter 1 P3 protein	O02228 Q20026 Q33BL1	CELE_Y71G10AR.4 cho-1 chtl-1	Caenorhabditis elegans
Metal ion SLC transporters	Cation diffusion facilitator family protein 1 Copper transport protein NRAMP-like transporter smf-1 NRAMP-like transporter smf-2 NRAMP-like transporter smf-3 SLC41A/MgtE integral membrane domain-containing protein SLC41A/MgtE integral membrane domain-containing protein SLC41A/MgtE integral membrane domain-containing protein	O02340 O44196 O45182 Q19936 Q21433 Q21434 Q95QW4 Q95XG8	CELE_F31E8.4 CELE_K07H8.2 CELE_ZK1053.6 CELE_ZK185.2 cdf-1 smf-1 smf-2 smf-3	Caenorhabditis elegans
Depolymerization of the Nuclear Lamina	CTD nuclear envelope phosphatase 1 homolog Cyclin N-terminal domain-containing protein Cyclin-dependent kinase 1 G2/mitotic-specific cyclin-B1 G2/mitotic-specific cyclin-B Intermediate filament protein ifa-1 Intermediate filament protein ifa-2 Intermediate filament protein ifa-3 Intermediate filament protein ifa-4 Intermediate filament protein ifb-1 Intermediate filament protein ifb-2 Intermediate filament protein ifc-1 Intermediate filament protein ifc-2 Intermediate filament protein ifd-1 Intermediate filament protein ifd-2 Intermediate filament protein ifp-1 LNS2/PITP domain-containing protein Lamin-1 Nuclear envelope phosphatase-regulatory subunit 1 homolog Protein kinase C-like 2	O02365 O45168 O45926 P34556 P90900 P90901 P90980 Q09501 Q10653 Q19286 Q19289 Q19782 Q20432 Q21065 Q21067 Q21443 Q86DC6 Q9BLB5 Q9XXN3 Q9XXT5	cdk-1 cnep-1 cyb-1 cyb-2.1 cyb-2.2 ifa-1 ifa-2 ifa-3 ifa-4 ifb-1 ifb-2 ifc-1 ifc-2 ifd-1 ifd-2 ifp-1 kin-11 lam-1 lmn-1 lpin-1 mua-6 ncc-1 nepr-1 pkc-2 scpl-2	Caenorhabditis elegans
Erythrocytes take up carbon dioxide and release oxygen	Ammonium transporter AmtB-like domain-containing protein Anion exchange protein Carbonic anhydrase Putative carbonic anhydrase 3 Putative carbonic anhydrase 5	O02637 Q10462 Q22947 Q27504 Q58QG8	abts-4 cah-3 cah-5 cah-6 rhr-1	Caenorhabditis elegans
Erythrocytes take up oxygen and release carbon dioxide	Ammonium transporter AmtB-like domain-containing protein Anion exchange protein Carbonic anhydrase Putative carbonic anhydrase 3 Putative carbonic anhydrase 5	O02637 Q10462 Q22947 Q27504 Q58QG8	abts-4 cah-3 cah-5 cah-6 rhr-1	Caenorhabditis elegans
Disinhibition of SNARE formation	Acetylcholine regulator unc-18 Protein kinase C-like 2 Putative syntaxin-2 Syntaxin-1A homolog Syntaxin-binding protein 1	O16000 O44412 P34815 P90980 Q20574	kin-11 lan-2 pkc-2 syn-2 syx-2 unc-18 unc-64 uncp-18	Caenorhabditis elegans
Switching of origins to a post-replicative state	DNA replication licensing factor MCM2 DNA replication licensing factor MCM3 DNA replication licensing factor MCM7 DNA replication licensing factor mcm-4 DNA replication licensing factor mcm-5 DNA replication licensing factor mcm-6	O16297 P34647 Q21902 Q95XQ8 Q9XVR7 Q9XXI9	MCM7 let-358 lin-6 mcm-2 mcm-3 mcm-4 mcm-5 mcm-6 mcm-7	Caenorhabditis elegans

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