GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 426 - 450 of 499 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism ▲ GlyTouCan ID
Activation of NF-kappaB in B cells
  • kin-11
  • pkc-2
Caenorhabditis elegans
ECM proteoglycans
  • C05D9.3
  • C18E9.7
  • C49C8.5
  • CELE_T15B7.1
  • CELE_T19D12.6
  • CELE_Y43C5A.2
  • dgn-1
  • ina-1
  • itx-1
  • ost-1
  • pat-2
  • pat-3
  • rig-5
  • sparc
  • ttn-1
Caenorhabditis elegans
Formation of TC-NER Pre-Incision Complex
  • CELE_F53H4.6
  • T24H10.1
  • ama-1
  • cdk-7
  • csa-1
  • csn-1
  • csn-2
  • csn-3
  • csn-4
  • csn-5
  • csn-6
  • cul-4
  • ddb-1
  • emb-4
  • gtf-2H1
  • gtf-2H2C
  • gtf-2H3
  • gtf-2H4
  • gtf-2H5
  • gtf-2h1
  • gtf-2h3
  • isy-1
  • math-33
  • mnat-1
  • prp-19
  • rbx-1
  • rpb-1
  • rpb-10
  • rpb-11
  • rpb-12
  • rpb-2
  • rpb-3
  • rpb-4
  • rpb-5
  • rpb-6
  • rpb-7
  • rpb-8
  • rpb-9
  • sel-13
  • syf-1
  • ubia
  • ubib
  • ubl-1
  • ubq-1
  • ubq-2
  • usp-7
  • uvs-1
  • xpa-1
  • xpb-1
  • xpd-1
Caenorhabditis elegans
NCAM signaling for neurite out-growth
  • C50C3.2/C50C3.3
  • kin-32
  • let-341
  • let-60
  • lin-34
  • mpk-1
  • ptp-3
  • rskn-2
  • sem-5
  • sma-1
  • sos-1
  • spc-1
  • src-1
  • sur-1
  • unc-70
Caenorhabditis elegans
Dopamine Neurotransmitter Release Cycle
  • aex-4
  • cat-1
  • cpx-1
  • lan-2
  • lin-10
  • lin-2
  • lin-7
  • rab-3
  • ric-4
  • rimb-1
  • snb-1
  • snb-2
  • snb-5
  • snb-6
  • snb-7
  • snn-1
  • snt-1
  • syd-2
  • tag-168
  • tag-81
  • unc-10
  • unc-13
  • unc-18
  • unc-64
  • vamp-7
Caenorhabditis elegans
U12 Dependent Splicing
  • C46F11.4
  • ama-1
  • cbp-20
  • cbp-80
  • cey-1
  • cey-2
  • cey-3
  • cey-4
  • ddx-23
  • dib-1
  • eftu-2
  • gtf-2F1
  • gtf-2F2
  • gtf-2f1
  • gtf-2f2
  • ncbp-1
  • ncbp-2
  • prp-6
  • prp-8
  • rpb-1
  • rpb-10
  • rpb-11
  • rpb-12
  • rpb-2
  • rpb-3
  • rpb-4
  • rpb-5
  • rpb-6
  • rpb-7
  • rpb-8
  • rpb-9
  • rsp-2
  • rsp-3
  • rsp-4
  • rsp-6
  • sap-49
  • sftb-1
  • sftb-2
  • snr-1
  • snr-2
  • snr-3
  • snr-4
  • snr-5
  • snr-6
  • snr-7
  • snrp-200
  • snrp-40.1
  • snrp-40.2
  • srp-1
  • srp-2
  • srp-4
  • teg-4
Caenorhabditis elegans
Downregulation of ERBB4 signaling
  • CELE_Y92H12A.2
  • kin-7
  • let-23
  • src-1
  • ubia
  • ubib
  • ubl-1
  • ubq-1
  • ubq-2
  • wwp-1
Caenorhabditis elegans
DAG and IP3 signaling
  • kin-13
  • pkc-1
  • tpa-1
  • ttx-4
Caenorhabditis elegans
Transport of bile salts and organic acids, metal ions and amine compounds
  • CELE_Y71G10AR.4
  • cho-1
  • chtl-1
Caenorhabditis elegans
Post-translational protein phosphorylation
  • B0524.2
  • C16E9.1
  • C18E9.7
  • C28G1.2
  • CELE_D1054.1
  • CELE_F07F6.7
  • CELE_F07F6.8
  • CELE_F15D3.4
  • CELE_F44G3.7
  • CELE_F47B7.2
  • CELE_M04D5.1
  • CELE_W01A8.8
  • CELE_Y64G10A.7
  • CELE_ZK1307.8
  • W03G11.3
  • Y71H2AM.10
  • anoh-2
  • apl-1
  • atgl-1
  • calu-1
  • cet-1
  • cpi-2
  • daf-7
  • dbl-1
  • dnj-7
  • egl-17
  • enpl-1
  • famk-1
  • lec-2
  • nid-1
  • nucb-1
  • ost-1
  • pdi-1
  • pdi-2
  • pdi-6
  • sdn-1
  • sparc
  • srp-1
  • srp-2
  • srp-3
  • srp-6
  • srp-7
  • srp-8
  • sup-17
  • tag-225
  • tag-320
  • timp-1
  • unc-129
Caenorhabditis elegans
FGFR1c ligand binding and activation
  • egl-15
  • egl-17
  • kal-1
  • let-756
Caenorhabditis elegans
Aryl hydrocarbon receptor signalling
  • aipr-1
  • daf-21
  • daf-41
  • p23
Caenorhabditis elegans
Cross-presentation of particulate exogenous antigens (phagosomes)
  • C03F11.3
  • C05D9.3
  • R07B1.3
  • pat-2
  • pat-3
  • scav-2
  • scav-3
  • scav-4
  • scav-6
Caenorhabditis elegans
MET interacts with TNS proteins
  • C05D9.3
  • CELE_F11E6.8
  • CELE_T22A3.6
  • svh-2
  • svh-6
  • tag-163
  • tns-1
Caenorhabditis elegans
RNA Polymerase II Transcription Initiation And Promoter Clearance
  • TFIIE-alpha
  • TFIIE-beta
  • ama-1
  • cdk-7
  • fust-1
  • gtf-2A2
  • gtf-2E1
  • gtf-2E2
  • gtf-2F1
  • gtf-2F2
  • gtf-2H1
  • gtf-2H2C
  • gtf-2H3
  • gtf-2H4
  • gtf-2H5
  • gtf-2e1
  • gtf-2e2
  • gtf-2f1
  • gtf-2f2
  • gtf-2h1
  • gtf-2h3
  • mnat-1
  • pqn-51
  • rpb-1
  • rpb-10
  • rpb-11
  • rpb-12
  • rpb-2
  • rpb-3
  • rpb-4
  • rpb-5
  • rpb-6
  • rpb-7
  • rpb-8
  • rpb-9
  • taf-1
  • taf-10
  • taf-11
  • taf-11.3
  • taf-12
  • taf-13
  • taf-2
  • taf-3
  • taf-4
  • taf-5
  • taf-6.1
  • taf-7.1
  • taf-7.2
  • taf-9
  • tbp
  • tbp-1
  • ttb-1
  • xpb-1
  • xpd-1
Caenorhabditis elegans
Ephrin signaling
  • ced-10
  • efn-2
  • efn-3
  • efn-4
  • gap-3
  • git-1
  • mab-26
  • max-2
  • mlc-4
  • nck-1
  • pak-1
  • pix-1
  • rac-1
  • src-1
  • vab-1
  • vab-2
Caenorhabditis elegans
Clathrin-mediated endocytosis
  • CELE_F14B4.1
  • CELE_T27E4.1
  • amph-1
  • ap50
  • apa-2
  • apb-1
  • aps-2
  • apt-10
  • arp-2
  • arr-1
  • arx-1
  • arx-2
  • arx-3
  • arx-4
  • arx-5
  • arx-6
  • arx-7
  • cdap-2
  • chc-1
  • clic-1
  • cwn-2
  • dnj-25
  • dpy-23
  • dsh-1
  • dsh-2
  • dyn-1
  • ehs-1
  • epn-1
  • fcho-1
  • gar-3
  • hgrs-1
  • hipr-1
  • hsp-1
  • hsp70a
  • itsn-1
  • kin-7
  • let-23
  • lin-17
  • lst-4
  • mig-5
  • mrp-6
  • ncap-1
  • npr-25
  • ocrl-1
  • ppk-1
  • pqn-19
  • rab-5
  • rme-2
  • rme-6
  • scav-3
  • sdpn-1
  • sem-5
  • sli-1
  • snb-1
  • snb-2
  • snb-5
  • snb-6
  • snb-7
  • snt-1
  • snt-2
  • snt-4
  • snt-5
  • stam-1
  • sue-1
  • tkr-1
  • toca-1
  • toca-2
  • ubia
  • ubib
  • ubl-1
  • ubq-1
  • ubq-2
  • unc-11
  • unc-17
  • unc-26
  • unc-41
  • unc-57
  • vamp-7
  • wnt-2
Caenorhabditis elegans
Reuptake of GABA
  • snf-11
Caenorhabditis elegans
RNA Polymerase II Transcription Termination
  • C49H3.4
  • CELE_K07A1.15
  • CELE_Y53G8AR.6
  • CELE_Y57G11A.5
  • K07C5.6
  • RBM8
  • Y14
  • aly-3
  • casc-3
  • cbp-20
  • cbp-80
  • cdl-1
  • cfim-1
  • cfim-2
  • clpf-1
  • cpf-1
  • cpf-2
  • cpsf-1
  • cpsf-2
  • cpsf-3
  • cpsf-4
  • eif-4A3
  • fipp-1
  • hel-1
  • mag-1
  • mog-1
  • ncbp-1
  • ncbp-2
  • pabp-2
  • pap-1
  • pcf-11
  • pfs-2
  • prp-17
  • rnp-4
  • rnp-5
  • rsp-2
  • rsp-3
  • rsp-4
  • rsp-6
  • rsp-7
  • rsr-1
  • smg-4
  • snr-1
  • snr-2
  • snr-5
  • snr-6
  • snr-7
  • srp-1
  • srp-2
  • srp-4
  • suf-1
  • symk-1
  • thoc-1
  • thoc-2
  • thoc-3
  • thoc-5
  • thoc-7
  • uaf-1
  • uaf-2
  • znf-236
Caenorhabditis elegans
Signaling by BMP
  • CELE_F35B12.10
  • aka-1
  • cem-1
  • cem-2
  • cem-3
  • cet-1
  • daf-14
  • daf-4
  • daf-7
  • dbl-1
  • let-70
  • sma-2
  • sma-3
  • sma-4
  • sma-6
  • tag-68
  • ubc-2
  • unc-129
Caenorhabditis elegans
Calnexin/calreticulin cycle
  • cnx-1
  • crt-1
  • pdi-3
Caenorhabditis elegans
Response to elevated platelet cytosolic Ca2+
  • kin-11
  • pkc-2
Caenorhabditis elegans
Erythrocytes take up oxygen and release carbon dioxide
  • abts-4
  • cah-3
  • cah-5
  • cah-6
  • rhr-1
Caenorhabditis elegans
Serotonin Neurotransmitter Release Cycle
  • aex-4
  • cat-1
  • cpx-1
  • lan-2
  • rab-3
  • ric-4
  • rimb-1
  • snb-1
  • snb-2
  • snb-5
  • snb-6
  • snb-7
  • snn-1
  • snt-1
  • syd-2
  • tag-168
  • tag-81
  • unc-10
  • unc-13
  • unc-18
  • unc-64
  • vamp-7
Caenorhabditis elegans
RHO GTPases activate PKNs
  • CELE_F55C10.5
  • CELE_W04B5.5
  • cdc-25.1
  • cdc-25.2
  • cdc-25.3
  • cdc-25.4
  • ced-10
  • ftt-1
  • ftt-2
  • gsp-1
  • mel-11
  • par-5
  • pkn-1
  • rac-1
  • rho-1
  • rhoa
Caenorhabditis elegans

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