GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 26 - 50 of 499 in total
Pathway Name Protein Name UniProt ID ▲ Gene Symbol Organism GlyTouCan ID
Cargo recognition for clathrin-mediated endocytosis
  • CELE_F14B4.1
  • CELE_F49C12.9
  • CELE_T27E4.1
  • ap50
  • apa-2
  • apb-1
  • aps-2
  • apt-10
  • arr-1
  • cdap-2
  • chc-1
  • clic-1
  • csn-1
  • csn-2
  • csn-3
  • csn-4
  • csn-5
  • csn-6
  • cwn-2
  • dpy-23
  • dsh-1
  • dsh-2
  • ehs-1
  • epn-1
  • fcho-1
  • gar-3
  • hgrs-1
  • itsn-1
  • kin-7
  • let-23
  • lin-17
  • mig-5
  • mrp-6
  • ncap-1
  • ned-8
  • npr-25
  • ooc-5
  • pqn-19
  • rme-2
  • scav-3
  • sem-5
  • sli-1
  • snb-1
  • snb-2
  • snb-5
  • snb-6
  • snb-7
  • snt-1
  • snt-2
  • snt-4
  • snt-5
  • stam-1
  • sue-1
  • tkr-1
  • tor-1
  • tor-2
  • ubia
  • ubib
  • ubl-1
  • ubq-1
  • ubq-2
  • ubql-1
  • unc-11
  • unc-17
  • unc-41
  • unc-57
  • vamp-7
  • wnt-2
Caenorhabditis elegans
RHOU GTPase cycle
  • CELE_T24B8.7
  • aap-1
  • cdc-42
  • chc-1
  • chw-1
  • gap-3
  • git-1
  • hgrs-1
  • hum-8
  • itsn-1
  • kin-32
  • let-99
  • magu-4
  • max-2
  • nck-1
  • pak-1
  • pak-2
  • par-6
  • pes-7
  • pix-1
  • pqn-19
  • sem-5
  • spc-1
  • srgp-1
  • stam-1
  • toe-2
  • txl
  • txl-1
  • unc-70
  • vab-1
  • vab-10
  • vang-1
  • wwp-1
Caenorhabditis elegans
RHOQ GTPase cycle
  • CELE_T04C9.1
  • abts-1
  • aex-4
  • arl-13
  • bar-1
  • cav-1
  • cav-2
  • cdc-42
  • citk-1
  • citk-2
  • crp-1
  • cyk-1
  • gcp-2.1
  • gcp-2.2
  • gei-1
  • git-1
  • glt-1
  • glt-3
  • glt-4
  • glt-5
  • glt-6
  • glt-7
  • gopc-1
  • hmp-2
  • itsn-1
  • let-413
  • let-99
  • magu-1
  • max-2
  • mrck-1
  • mrp-6
  • nra-1
  • pak-1
  • pak-2
  • pes-7
  • pix-1
  • pvl-1
  • rab-7
  • rga-1
  • rga-5
  • rga-8
  • ric-4
  • snb-1
  • spy-1
  • srgp-1
  • sto-2
  • syd-1
  • tag-81
  • toca-1
  • toca-2
  • toe-2
  • uig-1
  • vang-1
  • wrm-1
  • wwp-1
Caenorhabditis elegans
RHOG GTPase cycle
  • C05D9.3
  • CELE_T04C9.1
  • CELE_Y22D7AL.10
  • CELE_Y53F4B.1
  • CELE_Y71H2AM.12
  • F07F6.4
  • PLD
  • aap-1
  • cav-1
  • cav-2
  • cdc-42
  • cdh-4
  • ced-10
  • ced-12
  • ced-5
  • cgef-1
  • cyk-1
  • ephx-1
  • gcp-2.1
  • gcp-2.2
  • gex-2
  • itsn-1
  • let-99
  • magu-1
  • max-2
  • nuo-2
  • pak-1
  • pak-2
  • pes-7
  • pld-1
  • rab-7
  • rac-1
  • rac-2
  • rga-1
  • rga-5
  • rhi-1
  • snb-1
  • toe-2
  • uig-1
  • unc-73
  • vab-1
  • vang-1
  • vav-1
Caenorhabditis elegans
A tetrasaccharide linker sequence is required for GAG synthesis
  • C03H12.1
  • CELE_T19D12.6
  • glct-1
  • glct-2
  • glct-3
  • glct-4
  • glct-5
  • glct-6
  • gpn-1
  • itx-1
  • lon-2
  • rig-5
  • sdn-1
  • sqv-2
  • sqv-3
  • sqv-6
  • sqv-8
  • ttn-1
Caenorhabditis elegans
Formation of Senescence-Associated Heterochromatin Foci (SAHF)
  • asf-1
  • hil-3
  • hira-1
  • hmg-12
  • hmg-I-beta
  • ifa-1
  • ifa-2
  • ifa-3
  • ifa-4
  • ifb-1
  • ifb-2
  • ifc-1
  • ifc-2
  • ifd-1
  • ifd-2
  • ifp-1
  • lam-1
  • lmn-1
  • mua-6
  • picd-1
  • unc-85
Caenorhabditis elegans
PCP/CE pathway
  • CELE_Y71H2AM.12
  • ced-10
  • cwn-1
  • cwn-2
  • daam-1
  • dsh-1
  • dsh-2
  • lin-44
  • mig-5
  • mom-2
  • mom-5
  • rac-1
  • rac-2
  • rho-1
  • rhoa
  • wnt-1
  • wnt-2
Caenorhabditis elegans
Disassembly of the destruction complex and recruitment of AXIN to the membrane
  • C44H4.6
  • CELE_F14B4.1
  • R03D7.5
  • cav-1
  • cav-2
  • cfz-2
  • dsh-1
  • dsh-2
  • gsk-3
  • mig-5
  • mom-5
  • pry-1
  • rme-2
  • sgg-1
Caenorhabditis elegans
RHO GTPases Activate Formins
  • act-1
  • act-2
  • act-3
  • act-4
  • cdc-42
  • ced-10
  • cyk-1
  • daam-1
  • dsh-1
  • dsh-2
  • fozi-1
  • inft-2
  • mig-5
  • rac-1
  • rho-1
  • rhoa
  • src-1
  • srgp-1
Caenorhabditis elegans
Signaling by Hippo
  • ced-3
  • cst-1
  • cst-2
  • dsh-1
  • dsh-2
  • ftt-1
  • ftt-2
  • mig-5
  • mob-1
  • nphp-4
  • par-5
  • sav-1
  • wts-1
  • yap-1
  • zoo-1
Caenorhabditis elegans
WNT5A-dependent internalization of FZD4
  • ap50
  • apa-2
  • apb-1
  • aps-2
  • arr-1
  • chc-1
  • clic-1
  • cwn-2
  • dpy-23
  • dsh-1
  • dsh-2
  • kin-11
  • lin-17
  • mig-5
  • pkc-2
  • wnt-2
Caenorhabditis elegans
Degradation of DVL
  • C14C10.5
  • CELE_F35G12.12
  • cul-3
  • dsh-1
  • dsh-2
  • hecw-1
  • mig-5
  • pas-1
  • pas-2
  • pas-3
  • pas-4
  • pas-5
  • pas-6
  • pbs-1
  • pbs-2
  • pbs-3
  • pbs-4
  • pbs-5
  • pbs-7
  • psmd-9
  • psme-3
  • rbx-1
  • rpn-1
  • rpn-10
  • rpn-11
  • rpn-12
  • rpn-2
  • rpn-3
  • rpn-5
  • rpn-6.1
  • rpn-7
  • rpn-8
  • rpn-9
  • rpt-1
  • rpt-2
  • rpt-3
  • rpt-4
  • rpt-5
  • rpt-6
  • ubia
  • ubib
  • ubl-1
  • ubq-1
  • ubq-2
Caenorhabditis elegans
TP53 Regulates Metabolic Genes
  • CeTor
  • F13H10.3
  • aak-1
  • aak-2
  • aakb-1
  • aakb-2
  • aakg-1
  • aakg-2
  • aakg-3
  • aakg-4
  • aakg-5
  • daf-15
  • glna-1
  • glna-2
  • glna-3
  • gpi-1
  • gspd-1
  • gsr-1
  • let-363
  • lmtr-2
  • lmtr-3
  • lmtr-5
  • mlst-8
  • prdx-2
  • prx2
  • raga-1
  • ragc-1
  • rheb-1
  • sesn-1
  • tag-56
  • trx-1
  • trxr-1
Caenorhabditis elegans
Detoxification of Reactive Oxygen Species
  • ctl-3
  • cyc-2.1
  • cyc-2.2
  • gpx-3
  • gpx-5
  • gsr-1
  • gst-1
  • ndx-4
  • prdx-2
  • prdx-3
  • prdx-6
  • prx2
  • sdm-1
  • sod-1
  • sod-2
  • tag-56
  • trx-1
  • trx-2
  • trxr-1
  • trxr-2
Caenorhabditis elegans
Reactions specific to the complex N-glycan synthesis pathway
  • BE10.3
  • C05E4.15
  • C27D9.1
  • CEFT-4
  • CELE_F10E7.1
  • CELE_F53A2.11
  • CELE_F53C3.11
  • CELE_T05A7.11
  • CELE_T05A7.13
  • CELE_Y47D3A.1
  • W03G11.3
  • aman-2
  • aman-3
  • fut-3
  • fut-8
  • gly-20
  • pha-1
  • pha1
Caenorhabditis elegans
Lewis blood group biosynthesis
  • B0024.15
  • B0205.4
  • BE10.3
  • C05E4.15
  • C27D9.1
  • CEFT-4
  • CELE_F10E7.1
  • CELE_F53A2.11
  • CELE_F53C3.11
  • CELE_T05A7.11
  • CELE_T05A7.13
  • CELE_Y47D3A.1
  • fut-3
  • pha-1
  • pha1
Caenorhabditis elegans
Nuclear Receptor transcription pathway
  • XL285
  • chr-3
  • cnr-14
  • cnr-3
  • cnr-8
  • csr-1
  • daf-12
  • daf-20
  • fax-1
  • gei-8
  • let-527
  • mig-7
  • nhr-1
  • nhr-10
  • nhr-100
  • nhr-101
  • nhr-114
  • nhr-116
  • nhr-118
  • nhr-120
  • nhr-129
  • nhr-136
  • nhr-137
  • nhr-14
  • nhr-141
  • nhr-147
  • nhr-148
  • nhr-149
  • nhr-152
  • nhr-153
  • nhr-154
  • nhr-168
  • nhr-17
  • nhr-173
  • nhr-2
  • nhr-204
  • nhr-206
  • nhr-207
  • nhr-208
  • nhr-209
  • nhr-221
  • nhr-23
  • nhr-24
  • nhr-25
  • nhr-258
  • nhr-277
  • nhr-3
  • nhr-35
  • nhr-36
  • nhr-38
  • nhr-40
  • nhr-41
  • nhr-47
  • nhr-48
  • nhr-49
  • nhr-6
  • nhr-60
  • nhr-64
  • nhr-67
  • nhr-68
  • nhr-69
  • nhr-7
  • nhr-76
  • nhr-8
  • nhr-85
  • nhr-91
  • nhr-93
  • nr1g1
  • nr4a5
  • pqn-12
  • sex-1
  • unc-55
Caenorhabditis elegans
Aspirin ADME
  • B0252.3
  • B0361.11
  • C06H5.6
  • C44C10.3
  • C46C2.2
  • CELE_F21G4.1
  • CELE_F23F12.13
  • CELE_F43H9.4
  • CELE_F45E10.2
  • CELE_K05F1.6
  • CELE_K09E9.1
  • CELE_K11D9.3
  • CELE_T08B1.1
  • CELE_T10B10.4
  • CELE_T12B3.2
  • CELE_T22F7.1
  • CELE_Y57G11C.23
  • CELE_Y82E9BR.16
  • CELE_ZK892.3
  • F23F12.3/F23F12.1
  • ace-1
  • cest-1
  • cest-1.1
  • cest-1.2
  • cest-12
  • cest-13
  • cest-16
  • cest-17
  • cest-19
  • cest-2.1
  • cest-2.2
  • cest-2.3
  • cest-24
  • cest-26
  • cyp-23A1
  • cyp-23a1
  • cyp-33A1
  • cyp-33B1
  • cyp-33C1
  • cyp-33C11
  • cyp-33C12
  • cyp-33C2
  • cyp-33C3
  • cyp-33C4
  • cyp-33C5
  • cyp-33C6
  • cyp-33C7
  • cyp-33C8
  • cyp-33C9
  • cyp-33D1
  • cyp-33D3
  • cyp-33E1
  • cyp-33E2
  • cyp-33E3
  • cyp-33a1
  • cyp-33b1
  • cyp-33c1
  • cyp-33c11
  • cyp-33c12
  • cyp-33c2
  • cyp-33c3
  • cyp-33c4
  • cyp-33c5
  • cyp-33c6
  • cyp-33c7
  • cyp-33c8
  • cyp-33c9
  • cyp-33d1
  • cyp-33d3
  • cyp-33e1
  • cyp-33e2
  • cyp-33e3
  • cyp-34A1
  • cyp-34A10
  • cyp-34A2
  • cyp-34A5
  • cyp-34A6
  • cyp-34A7
  • cyp-34A8
  • cyp-34A9
  • cyp-34a1
  • cyp-34a10
  • cyp-34a2
  • cyp-34a4
  • cyp-34a5
  • cyp-34a6
  • cyp-34a7
  • cyp-34a8
  • cyp-34a9
  • cyp-35A1
  • cyp-35A2
  • cyp-35A3
  • cyp-35A4
  • cyp-35A5
  • cyp-35B1
  • cyp-35B2
  • cyp-35B3
  • cyp-35C1
  • cyp-35a1
  • cyp-35a2
  • cyp-35a3
  • cyp-35a4
  • cyp-35a5
  • cyp-35b1
  • cyp-35b2
  • cyp-35b3
  • cyp-35c1
  • cyp-35d1
  • cyp-36A1
  • cyp36a1
  • dach-1
  • daf-9
  • ges-1
  • mct-1
  • mct-2
  • mct-3
  • mct-4
  • mct-5
  • mct-6
  • mrp-1
  • mrp-2
  • mrp-3
  • mrp-4
  • mrp-7
  • mrp-8
  • oct-1
  • oct-2
  • pes-23
  • rig-6
  • slcf-1
  • suex-2
Caenorhabditis elegans
Neurotransmitter clearance
  • B0252.3
  • B0361.11
  • C06H5.6
  • C44C10.3
  • C46C2.2
  • CELE_F23F12.13
  • CELE_F45E10.2
  • CELE_K05F1.6
  • CELE_K09E9.1
  • CELE_K11D9.3
  • CELE_T08B1.1
  • CELE_T12B3.2
  • CELE_T22F7.1
  • CELE_Y57G11C.23
  • CELE_Y82E9BR.16
  • CELE_ZK892.3
  • F23F12.3/F23F12.1
  • ace-1
  • cest-1
  • cest-1.1
  • cest-1.2
  • cest-12
  • cest-13
  • cest-16
  • cest-17
  • cest-19
  • cest-2.1
  • cest-2.2
  • cest-2.3
  • cest-24
  • cest-26
  • ges-1
  • oct-1
  • oct-2
  • pes-23
  • suex-2
Caenorhabditis elegans
Carnitine metabolism
  • B0252.3
  • B0361.11
  • C06H5.6
  • C44C10.3
  • C46C2.2
  • CELE_F23F12.13
  • CELE_F45E10.2
  • CELE_K05F1.6
  • CELE_K09E9.1
  • CELE_K11D9.3
  • CELE_T08B1.1
  • CELE_T12B3.2
  • CELE_T22F7.1
  • CELE_W03F9.4
  • CELE_Y57G11C.23
  • CELE_Y82E9BR.16
  • CELE_ZK892.3
  • F23F12.3/F23F12.1
  • aak-2
  • aakb-1
  • aakb-2
  • aakg-1
  • aakg-2
  • aakg-3
  • aakg-4
  • aakg-5
  • cnr-14
  • cpt-1
  • cpt-2
  • cpt-3
  • cpt-4
  • cpt-5
  • cpt-6
  • dif-1
  • nhr-2
  • nhr-24
  • nhr-7
  • nhr-85
  • nhr-91
  • nr1g1
  • oct-1
  • oct-2
  • pes-23
  • sex-1
  • suex-2
  • unc-55
Caenorhabditis elegans
Norepinephrine Neurotransmitter Release Cycle
  • B0252.3
  • B0361.11
  • C06H5.6
  • C44C10.3
  • C46C2.2
  • CELE_F23F12.13
  • CELE_F45E10.2
  • CELE_K05F1.6
  • CELE_K09E9.1
  • CELE_K11D9.3
  • CELE_T08B1.1
  • CELE_T12B3.2
  • CELE_T22F7.1
  • CELE_Y57G11C.23
  • CELE_Y82E9BR.16
  • CELE_ZK892.3
  • F23F12.3/F23F12.1
  • aex-4
  • cat-1
  • cpx-1
  • lan-2
  • oct-1
  • oct-2
  • pes-23
  • rab-3
  • ric-4
  • rimb-1
  • snb-1
  • snb-2
  • snb-5
  • snb-6
  • snb-7
  • snt-1
  • suex-2
  • syd-2
  • tag-168
  • tag-81
  • unc-10
  • unc-13
  • unc-18
  • unc-64
  • vamp-7
Caenorhabditis elegans
Ciprofloxacin ADME
  • B0252.3
  • B0361.11
  • C06H5.6
  • C44C10.3
  • C46C2.2
  • CELE_F21G4.1
  • CELE_F23F12.13
  • CELE_F45E10.2
  • CELE_K05F1.6
  • CELE_K09E9.1
  • CELE_K11D9.3
  • CELE_T08B1.1
  • CELE_T12B3.2
  • CELE_T22F7.1
  • CELE_Y57G11C.23
  • CELE_Y82E9BR.16
  • CELE_ZK892.3
  • F23F12.3/F23F12.1
  • abcx-1
  • oct-1
  • oct-2
  • pes-23
  • suex-2
  • wht-5
Caenorhabditis elegans
Na+/Cl- dependent neurotransmitter transporters
  • B0252.3
  • B0361.11
  • C06H5.6
  • C44C10.3
  • C46C2.2
  • CELE_F23F12.13
  • CELE_F45E10.2
  • CELE_K05F1.6
  • CELE_K09E9.1
  • CELE_K11D9.3
  • CELE_T08B1.1
  • CELE_T12B3.2
  • CELE_T22F7.1
  • CELE_Y57G11C.23
  • CELE_Y82E9BR.16
  • CELE_ZK892.3
  • F23F12.3/F23F12.1
  • cat-1
  • dat-1
  • oct-1
  • oct-2
  • pes-23
  • snf-11
  • snf-2
  • snf-5
  • snf-7
  • snf-9
  • suex-2
Caenorhabditis elegans
Organic cation transport
  • B0252.3
  • B0361.11
  • C06H5.6
  • C44C10.3
  • C46C2.2
  • C53B4.3
  • CELE_F23F12.13
  • CELE_F45E10.2
  • CELE_K05F1.6
  • CELE_K09E9.1
  • CELE_K11D9.3
  • CELE_T08B1.1
  • CELE_T12B3.2
  • CELE_T22F7.1
  • CELE_Y57G11C.23
  • CELE_Y82E9BR.16
  • CELE_ZK892.3
  • F23F12.3/F23F12.1
  • mab-2
  • oct-1
  • oct-2
  • pes-23
  • rnt-1
  • run-1
  • suex-2
Caenorhabditis elegans
Abacavir transmembrane transport
  • B0252.3
  • B0361.11
  • C06H5.6
  • C44C10.3
  • C46C2.2
  • CELE_F23F12.13
  • CELE_F45E10.2
  • CELE_K05F1.6
  • CELE_K09E9.1
  • CELE_K11D9.3
  • CELE_T08B1.1
  • CELE_T12B3.2
  • CELE_T22F7.1
  • CELE_Y57G11C.23
  • CELE_Y82E9BR.16
  • CELE_ZK892.3
  • F23F12.3/F23F12.1
  • oct-1
  • oct-2
  • pes-23
  • suex-2
Caenorhabditis elegans

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Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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