GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 51 - 75 of 499 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID ▲
Iron uptake and transport
  • C09D4.1
  • CELE_F39G3.4
  • CELE_F39G3.5
  • F55H2.5
  • abcx-1
  • aco-1
  • cand-1
  • cul-1
  • ftn-1
  • ftn-2
  • gei-22
  • lin-19
  • ned-8
  • skr-1
  • slc-46A
  • slc-46a
  • slcr-46.1
  • slcr-46.2
  • slcr-46.3
  • smf-1
  • ubia
  • ubib
  • ubl-1
  • ubq-1
  • ubq-2
  • wht-5
Caenorhabditis elegans
Adrenoceptors
  • ser-2
  • ser-5
  • tyra-2
Caenorhabditis elegans
mTORC1-mediated signalling
  • CeTor
  • F13H10.3
  • daf-15
  • efk-1
  • fkb-2
  • fkb-8
  • ftt-1
  • ftt-2
  • ifg-1
  • let-363
  • lmtr-2
  • lmtr-3
  • lmtr-5
  • mlst-8
  • par-5
  • raga-1
  • ragc-1
  • rheb-1
  • rps-6
  • rsks-1
Caenorhabditis elegans
EGFR downregulation
  • CELE_F14B4.1
  • cdap-2
  • cdc-42
  • ehs-1
  • epn-1
  • hgrs-1
  • kin-7
  • let-23
  • pix-1
  • pqn-19
  • ptp-1
  • rme-2
  • sem-5
  • sli-1
  • stam-1
  • ubia
  • ubib
  • ubl-1
  • ubq-1
  • ubq-2
  • unc-57
Caenorhabditis elegans
RUNX3 regulates p14-ARF
  • bro-1
  • cbp-1
  • cet-1
  • cyd-1
  • daf-7
  • dbl-1
  • hda-4
  • hda-7
  • mab-2
  • rnt-1
  • run-1
  • unc-129
Caenorhabditis elegans
Fibronectin matrix formation
  • C05D9.3
  • C18E9.7
  • pat-2
Caenorhabditis elegans
Cyclin E associated events during G1/S transition
  • akt-1
  • akt-2
  • cdc-25.1
  • cdc-25.2
  • cdc-25.3
  • cdc-25.4
  • cdk-2
  • cki-2
  • cye-1
Caenorhabditis elegans
Regulation of TLR by endogenous ligand
  • C05C9.1
  • C06E8.5
  • C06G1.1
  • C55C3.1
  • CELE_F01G10.10
  • CELE_F10D11.6
  • CELE_F44A2.3
  • CELE_ZC513.2
  • T19C3.5
  • hmg-1.2
  • nrf-5
Caenorhabditis elegans
Glycerophospholipid biosynthesis
  • F52C9.3
Caenorhabditis elegans
Insulin receptor recycling
  • daf-2
  • fus-1
  • rdy-1
  • spe-5
  • unc-32
  • vha-10
  • vha-11
  • vha-12
  • vha-13
  • vha-14
  • vha-15
  • vha-16
  • vha-17
  • vha-19
  • vha-2
  • vha-3
  • vha-4
  • vha-5
  • vha-6
  • vha-7
  • vha-8
  • vha-9
Caenorhabditis elegans
RHOU GTPase cycle
  • CELE_T24B8.7
  • aap-1
  • cdc-42
  • chc-1
  • chw-1
  • gap-3
  • git-1
  • hgrs-1
  • hum-8
  • itsn-1
  • kin-32
  • let-99
  • magu-4
  • max-2
  • nck-1
  • pak-1
  • pak-2
  • par-6
  • pes-7
  • pix-1
  • pqn-19
  • sem-5
  • spc-1
  • srgp-1
  • stam-1
  • toe-2
  • txl
  • txl-1
  • unc-70
  • vab-1
  • vab-10
  • vang-1
  • wwp-1
Caenorhabditis elegans
FLT3 Signaling
  • CELE_F59F5.3
  • akt-1
  • akt-2
  • daf-16
  • ddr-2
  • kin-36
  • let-341
  • let-60
  • lin-34
  • sem-5
  • sos-1
  • svh-4
Caenorhabditis elegans
Peroxisomal protein import
  • B0272.4
  • B0395.3
  • C15B12.1
  • C17C3.1
  • C24A3.4
  • C31H5.6
  • C32D5.11
  • CELE_F41E6.5
  • CELE_F44E7.4
  • CELE_F58A6.1
  • CELE_K05B2.4
  • CELE_T05E7.1
  • CELE_T20B3.1
  • CELE_T24B8.7
  • CELE_W03D8.8
  • CELE_Y71G12B.10
  • T18D3.9
  • acl-7
  • acox-1
  • acox-1.1
  • acox-1.2
  • acox-1.3
  • acox-1.4
  • acox-1.5
  • acox-1.6
  • acox-2
  • acox-3
  • acox-4
  • acox-5
  • acox-6
  • acs-20
  • acs-22
  • agxt-1
  • ctl-3
  • daao-1
  • dapat
  • ddo-1
  • ddo-2
  • ddo-3
  • dhrs-4
  • ech-8
  • gstk-2
  • hacl-1
  • hpo-15
  • idh-1
  • let-70
  • lonp-2
  • maoc-1
  • mlcd-1
  • ndx-7
  • ndx-8
  • prx-12
  • prx-13
  • prx-14
  • prx-5
  • ubc-2
  • ubia
  • ubib
  • ubl-1
  • ubq-1
  • ubq-2
Caenorhabditis elegans
Sensory perception of salty taste
  • asic-1
  • asic-2
  • deg-1
  • degt-1
  • del-1
  • del-3
  • del-4
  • del-6
  • egas-1
  • egas-2
  • egas-3
  • egas-4
  • mec-10
  • mec-13
  • mec-4
  • unc-105
  • unc-8
Caenorhabditis elegans
P2Y receptors
  • gnrr-4
Caenorhabditis elegans
Cell-extracellular matrix interactions
  • fln-1
  • pat-4
  • pat-6
  • pin-2
  • unc-112
  • unc-34
  • unc-97
  • zyx-1
Caenorhabditis elegans
Collagen degradation
  • C16E9.1
  • CELE_K03B8.6
  • clb-2
  • cle-1
  • emb-9
  • eppl-1
  • zmp-1
  • zmp-2
  • zmp-3
  • zmp-5
  • zmp-6
Caenorhabditis elegans
SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription
  • ccnk-1
  • cdk-8
  • cdk-9
  • cem-3
  • cic-1
  • cit-1.1
  • cit-1.2
  • daf-8
  • dpl-1
  • efl-1
  • kpc-1
  • lin-35
  • mpk-1
  • sma-4
  • sur-1
  • tag-68
  • ubia
  • ubib
  • ubl-1
  • ubq-1
  • ubq-2
  • yap-1
Caenorhabditis elegans
N-glycan trimming and elongation in the cis-Golgi
  • gly-13
Caenorhabditis elegans
Sphingolipid catabolism
  • W02F12.2
  • alh-4
  • alh-5
  • plpp-1.1
  • plpp-1.2
  • plpp-1.3
  • spl-1
Caenorhabditis elegans
RHOA GTPase cycle
  • C07B5.4
  • CELE_F23H11.4
  • CELE_H40L08.1
  • CELE_T04C9.1
  • CELE_Y105E8A.25
  • PLD
  • aap-1
  • aex-4
  • ani-2
  • bar-1
  • cav-1
  • cav-2
  • cdh-10
  • ced-5
  • cgef-1
  • cri-3
  • cyk-1
  • cyk-4
  • daam-1
  • ect-2
  • ephx-1
  • fozi-1
  • frm-3
  • gck-4
  • gcp-2.1
  • gcp-2.2
  • gei-1
  • hmp-2
  • hum-7
  • inft-2
  • let-502
  • let-99
  • maa-1
  • osg-1
  • pes-7
  • pix-1
  • pkn-1
  • pld-1
  • pmp-2
  • pvl-1
  • rga-1
  • rga-2
  • rga-4
  • rga-5
  • rga-6
  • rga-8
  • rga-9
  • rhgf-1
  • rhgf-2
  • rhi-1
  • rho-1
  • rhoa
  • ric-4
  • sly-1
  • snb-1
  • spv-1
  • spy-1
  • srgp-1
  • sto-2
  • tag-325
  • tag-81
  • tiam-1
  • toe-2
  • uig-1
  • unc-73
  • vang-1
  • vav-1
  • wrm-1
  • zoo-1
Caenorhabditis elegans
Myogenesis
  • C49C3.10
  • CELE_F21F3.2
  • CELE_Y106G6D.4
  • CELE_Y106G6E.1
  • CELE_Y51B9A.9
  • CeMef-2
  • gska-3
  • gskl-2
  • hlh-1
  • hlh-2
  • mef-2
  • pmk-1
  • pmk-2
  • pmk-3
Caenorhabditis elegans
Collagen chain trimerization
  • C16E9.1
  • C18H7.1
  • C29A12.6
  • CELE_F31F7.2
  • CELE_K09E2.1
  • CELE_R193.2
  • CELE_T19D12.4
  • clb-2
  • cle-1
  • col-99
  • emb-9
Caenorhabditis elegans
VxPx cargo-targeting to cilium
  • CELE_F54C9.11
  • CELE_F57C9.6
  • che-6
  • cng-1
  • cng-2
  • cng-3
  • exoc-7
  • exoc-8
  • pdk-2
  • pkd-2
  • rab-11.1
  • rab-8
  • rab8
  • rabr-1
  • rfip-1
  • sec-10
  • sec-15
  • sec-3
  • sec-5
  • sec-6
  • sec-8
  • tax-2
  • tax-4
Caenorhabditis elegans
TCF dependent signaling in response to WNT
  • hmp-2
Caenorhabditis elegans

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024